Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-24529 - Expression analysis of transgenic embryos carrying the mitf-BRAFV600E allele in the presence or absence of p53 function

Status
Released on 30 March 2011, last updated on 27 March 2012
Organism
Danio rerio
Samples (12)
Array (1)
Protocols (7)
Description
Investigation of expression differences between melanomas harvested from MiniCoopR-GFP versus MiniCoopR-SETDB1 transgenic zebrafish The embryos described in this study are further analyzed in a manuscript submitted for publication by White, et al. A 12 chip study comparing gene expression levels in 80hpf animals either WT (Tu), mitf-BRAFV600E, p53-/-, or mitf-BRAFV600E;p53-/- (double)
Experiment type
transcription profiling by array 
Contacts
Citation
DHODH modulates transcriptional elongation in the neural crest and melanoma. White RM, Cech J, Ratanasirintrawoot S, Lin CY, Rahl PB, Burke CJ, Langdon E, Tomlinson ML, Mosher J, Kaufman C, Chen F, Long HK, Kramer M, Datta S, Neuberg D, Granter S, Young RA, Morrison S, Wheeler GN, Zon LI. , PMID:21430780
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-24529.idf.txt
Sample and data relationshipE-GEOD-24529.sdrf.txt
Raw data (1)E-GEOD-24529.raw.1.zip
Processed data (1)E-GEOD-24529.processed.1.zip
Array designA-AFFY-38.adf.txt
R ExpressionSetE-GEOD-24529.eSet.r
Links