E-GEOD-2379 - Transcription profiling of human hypopharyngeal cancer samples

Status
Released on 25 August 2007, last updated on 27 March 2012
Organism
Homo sapiens
Samples (38)
Arrays (2)
Protocols (4)
Description
Gene expression analysis of a unique HNSCC (Head and Neck Squamous Cell Carcinoma) localization, the hypopharynx. Four normal and 34 tumor samples were analysed using Affymetrix HG-U95A microarrays containing probe sets representing ~12650 distinct transcription features.
Experiment types
transcription profiling by array, co-expression, disease state
Contact
Citation
Identification of genes associated with tumorigenesis and metastatic potential of hypopharyngeal cancer by microarray analysis. Anne Cromer, Annaick Carles, Regine Millon, Gitali Ganguli, Frederic Chalmel, Frederic Lemaire, Julia Young, Doulaye Dembele, Christelle Thibault, Daniele Muller, Olivier Poch, Joseph Abecassis, Bohdan Wasylyk.
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-2379.idf.txt
Sample and data relationshipE-GEOD-2379.sdrf.txt
Raw data (1)E-GEOD-2379.raw.1.zip
Processed data (1)E-GEOD-2379.processed.1.zip
Array designsA-AFFY-1.adf.txt, A-AFFY-9.adf.txt
R ExpressionSetE-GEOD-2379.eSet.r
Links