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E-GEOD-22947 - Transcription profiling by array of Arabidopsis stem tissues after treatment with naphthaleneacetic acid

Status
Released on 31 December 2010, last updated on 30 April 2015
Organism
Arabidopsis thaliana
Samples (24)
Array (1)
Protocols (8)
Description
In-vitro induced establishment and activity of the interfascicular cambium in Arabidopsis thaliana stems under auxin treatments. We used microarrays to detail the global programme of gene expression underlying the establishment and activity of the interfascicular cambium and identified tissue-speciffic up-regulated genes during this process. Different tissue types from in-vitro auxin treated stems were selected at successive stages of cambium establishment using laser capture microdissection for RNA extraction and hybridization on Affymetrix microarrays. We aimed to obtain genes exclussively upregulated in the interfascicular region responsible for cambium establishment and activity.
Experiment type
transcription profiling by array 
Contacts
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-22947.idf.txt
Sample and data relationshipE-GEOD-22947.sdrf.txt
Raw data (1)E-GEOD-22947.raw.1.zip
Processed data (1)E-GEOD-22947.processed.1.zip
Array designA-AFFY-2.adf.txt
Links