Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-16393 - eqtl analysis (random pair design)-Establishing the network of seed gene expression and analysis of its biodiversity

Status
Submitted on 1 June 2009, released on 5 June 2009, last updated on 1 May 2014
Organism
Arabidopsis thaliana
Samples (320)
Array (1)
Protocols (327)
Description
gnp3_tri33-arabidoseed - eqtl analysis (random pair design) - WP3 : Biodiversity of seed traits : state of the art - Comparison of the developping seed transcriptome in 160 Bay0/Sha Recombinant Inbred Lines (RILs) at 10 days after pollinisation. Keywords: genotype and ecotype comparison 80 dye-swap - CATMA arrays
Experiment type
transcription profiling by array 
Contacts
sandrine balzergue, Jean-Pierre P Renou, Marie-Laure L Martin-Magniette, Michel Caboche, Samira Elftieh
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-16393.idf.txt
Sample and data relationshipE-GEOD-16393.sdrf.txt
Raw data (2)E-GEOD-16393.raw.1.zip, E-GEOD-16393.raw.2.zip
Processed data (1)E-GEOD-16393.processed.1.zip
Array designA-GEOD-4346.adf.txt
R ExpressionSetE-GEOD-16393.eSet.r
Links