Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-16198 - Transcription profiling by array of Drosophila fed methamphetamine

Status
Released on 30 October 2010, last updated on 3 September 2015
Organism
Drosophila melanogaster
Samples (6)
Array (1)
Protocols (15)
Description
Methamphetamine can trigger dopamine releasing in human brain, now used as abuse drug. Some studies have shown that specific genes and proteins responded to, methamphetamine, but little is known about the overall omic response of organisms to this illicit substance. Here we demonstrate that Drosophila melanogaster has the potential to give us significant insights into evolutionarily conserved responses to methamphetamine. We performed metabolome, proteome, and transciptome profiling with Drosophila treated with methamphetamine. The proteomic profiling revealed responses associated with known physiological problems that occur with methamphetamine usage in mammals. The metabolomic result showed that the metabolite trehalose was decreased significantly after methamphetamine exposure, suggesting an oxidative stress response to this drug. Many of the differential transcribed genes, including detoxification enzymes, had the potential transcription factor-binding motif YY1 associated with their upstream regulatory regions. YY1 is known to be responsive to amphetamines in mammals. For each sample, 20 virgin male flies were used to extract the mRNA. Three replicates were produced for each treatments. Two treatments were produced (control VS 0.6% 24 h meth-fed).
Experiment type
transcription profiling by array 
Contacts
Hongmei LI <hmli@illinois.edu>, Barry Pittendrigh, Hongmei Li, Lijie Sun, Venu Margam, Weilin Sun
Citation
Systems-scale analysis reveals pathways involved in cellular response to methamphetamine. Sun L, Li HM, Seufferheld MJ, Walters KR Jr, Margam VM, Jannasch A, Diaz N, Riley CP, Sun W, Li YF, Muir WM, Xie J, Wu J, Zhang F, Chen JY, Barker EL, Adamec J, Pittendrigh BR.
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-16198.idf.txt
Sample and data relationshipE-GEOD-16198.sdrf.txt
Raw data (1)E-GEOD-16198.raw.1.zip
Processed data (1)E-GEOD-16198.processed.1.zip
Array designA-AFFY-35.adf.txt
Links