Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-15090 - Gene expression profiles in muscle tissue from FSHD patients

Status
Released on 4 March 2009, last updated on 27 June 2012
Organism
Homo sapiens
Samples (15)
Array (1)
Protocols (6)
Description
Muscle biopsies from biceps and deltoid were taken from 5 patients with FSHD, 5 asymptomatic carriers and 5 normal controls. The genome-wide expression patterns were compared using Affymetrix U133 Plus 2.0 chips. Keywords: Facioscapulohumeral, FSHD, muscular dystrophy Gene expression profiles were generated for 15 individuals (5 affected patients, 5 asymptomatic carriers and 5 healthy controls)
Experiment type
transcription profiling by array 
Contacts
Alvin T. Kho <alvin_kho@hms.harvard.edu>, Alvin T Kho, Louis Kunkel, Mayana Zatz, Patricia Arashiro
Citation
Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers. Arashiro P, Eisenberg I, Kho AT, Cerqueira AM, Canovas M, Silva HC, Pavanello RC, Verjovski-Almeida S, Kunkel LM, Zatz M. , PMID:19339494
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-15090.idf.txt
Sample and data relationshipE-GEOD-15090.sdrf.txt
Raw data (1)E-GEOD-15090.raw.1.zip
Processed data (1)E-GEOD-15090.processed.1.zip
Array designA-AFFY-44.adf.txt
R ExpressionSetE-GEOD-15090.eSet.r
Links