Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-14204 - Transcription profiling of human hepatocytes treated with 25-hydroxycholesterol and the antiviral state it conveys against the HCV

Status
Submitted on 24 December 2008, released on 2 January 2009, last updated on 10 June 2011
Organism
Homo sapiens
Samples (10)
Array (1)
Protocols (4)
Description
Hepatitis C virus (HCV) infection is a global health problem. A number of studies have implicated a direct role of cellular lipid metabolism in the HCV life cycle and inhibitors of the mevalonate pathway have been demonstrated to result in an antiviral state within the host cell. Transcriptome profiling was also conducted on Huh-7 human hepatoma cells bearing subgenomic HCV replicons with and without treatment with 25-hydroxycholesterol (25-HC), an inhibitor of the mevalonate pathway that alters lipid metabolism, to assess metabolic determinants of pro- and antiviral states within the host cell. Experiment Overall Design: compound treatment and time course
Experiment types
transcription profiling by array, unknown experiment type
Contact
Paul
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-14204.idf.txt
Sample and data relationshipE-GEOD-14204.sdrf.txt
Raw data (1)E-GEOD-14204.raw.1.zip
Processed data (1)E-GEOD-14204.processed.1.zip
Array designA-AFFY-33.adf.txt
R ExpressionSetE-GEOD-14204.eSet.r
Links