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E-GEOD-13520 - Expression profiles of (40,XX) and (39,XO) females

Status
Submitted on 7 November 2008, released on 7 April 2010, last updated on 1 May 2014
Organism
Mus musculus
Samples (36)
Array (1)
Protocols (4)
Description
Gobal expression analysis in four somatic tissues (brain, liver, kidney and muscle) of adult 40,XX and 39,XO mice with the aim of identifying which genes are expressed from both X chromosomes as well as those genes deregulated in X chromosome monosomy. Keywords: Expression profiling by array For each tissue, the RNA samples of seven 40,XX, eight 39,XpO and eight 39,XmO mice were pooled by genotype into 9 groups, representing 3 biological replicates per genotype, as follows: 39,XpO-1 and 39,XpO-2 (3 pooled individuals each), 39,XpO-3 (2 pooled individuals); 39,XmO-1 and 39,XmO-2 (3 pooled individuals each), 39,XmO-3 (2 pooled individuals); 40,XX-1 and 40,XX-2 (3 pooled individuals each) 40,XX-3 (2 pooled individuals)
Experiment type
transcription profiling by array 
Contacts
Alexandra M. Lopes <alopes@ipatimup.pt>, Alexandra M Lopes, Andrew Ojarikre, Carole Sargent, Julien Bauer, Nabeel A Affara, Paul S Burgoyne
Citation
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-13520.idf.txt
Sample and data relationshipE-GEOD-13520.sdrf.txt
Processed data (1)E-GEOD-13520.processed.1.zip
Array designA-MEXP-933.adf.txt
Links