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E-GEOD-11026 - Wind-responsive changes in poplar leaves of different developmental stages

Status
Released on 3 April 2008, last updated on 1 May 2014
Organism
Populus nigra
Samples (48)
Array (1)
Protocols (8)
Description
A developmental series of wind-treated Populus leaf tissue was subjected to array analyses in order to address the issue of age-dependent responsiveness to environmental changes. The following developmental stages were defined for the experiment: Y – “youngest leaf” including the shoot tip = smallest fully enrolled leaf; E – “expanded leaf” = oldest leaf that had not reached full leaf thickness; M – “mature leaf” = 5th leaf below E = has reached full leaf expansion and full leaf thickness; O – “old leaf” = 5th leaf below E. Keywords: transcription profiling Two-condition experiment, control (K) vs. Wind-treated (W) leaves. Biological replicates: 3 control (1-3), wind-exposed (1-3), independently grown and harvested. One swap replicate per array.
Experiment type
transcription profiling by array 
Contacts
Silvia Fluch <geo@ncbi.nlm.nih.gov>, C C Olmo, D Kopecky, I Matusikova, M Sierschneider, S Fluch, S Tauber, T Reichenauer
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-11026.idf.txt
Sample and data relationshipE-GEOD-11026.sdrf.txt
Raw data (1)E-GEOD-11026.raw.1.zip
Processed data (1)E-GEOD-11026.processed.1.zip
Array designA-GEOD-6036.adf.txt
R ExpressionSetE-GEOD-11026.eSet.r
Links