E-GEOD-10851 - Gene differential expression between attachment and detachment of zebra mussel

Released on 19 April 2008, last updated on 1 May 2014
Dreissena polymorpha
Samples (8)
Array (1)
Protocols (6)
A zebra mussel byssus cDNA microarray was used to identify the differentially expressed genes between attachment and detachment. Keywords: Gene differential expression The zebra mussels were divided in to two groups: AT and DT. In group AT all the zebra mussels were kept in the water attached for 48 hours while in group DT, the individuals were kept detached underwater for 48 hours. The feet of the zebra mussels were taken from each group. Four replicates, including four individual feet each replicate, were taken from each group for total RNA extraction. Four microarray hybridization performed between AT and DE. In each group, two cDNA replicates were labeled with Alexa 555 while the other two were labeled with Alexa 647. Every hybridization happened between two cDNA samples from different group with different labels.
Experiment type
transcription profiling by array 
Wei Xu <xuwei3@msu.edu>, Mohamed Faisal
Investigation descriptionE-GEOD-10851.idf.txt
Sample and data relationshipE-GEOD-10851.sdrf.txt
Raw data (1)E-GEOD-10851.raw.1.zip
Processed data (1)E-GEOD-10851.processed.1.zip
Array designA-GEOD-6586.adf.txt
R ExpressionSetE-GEOD-10851.eSet.r