Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-10428 - Transcription profiling of mouse pRb null primary myoblasts and myotubes will provide a global picture of the downstream targets of pRb transcriptional regulation in relation to cell cycle control, apoptosis inhibition, and muscle differentiation

Status
Released on 8 April 2008, last updated on 2 May 2014
Organism
Mus musculus
Samples (24)
Arrays (2)
Protocols (12)
Description
Satellite cells play an important role in post-natal growth and regeneration of skeletal muscle. They can be defined as a population adult muscle stem cells based on their self renewal capability and ability to differentiate into skeletal muscle fibers. Functional Retinoblastoma protein (pRb) is essential for the process of skeletal muscle differentiation in satellite cell derived primary myoblasts. Furthermore, the biochemical function of pRb is largely associated with its ability to interact with chromatin modifying factors such as histone deacetylases (HDACs) and histone methyltransferases thus inhibiting transcription of target gene promoters. Hence, expression profiling of pRb null primary myoblasts and myotubes will provide a global picture of the downstream targets of pRb transcriptional regulation in relation to cell cycle control, apoptosis inhibition, and muscle differentiation. Experiment Overall Design: This experiment includes 4 samples with 3 replicates each on 2 platforms for a total of 24 Samples.
Experiment types
transcription profiling by array, unknown experiment type
Contact
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-10428.idf.txt
Sample and data relationshipE-GEOD-10428.sdrf.txt
Raw data (1)E-GEOD-10428.raw.1.zip
Processed data (1)E-GEOD-10428.processed.1.zip
Additional data (1)E-GEOD-10428.additional.1.zip
Array designsA-AFFY-24.adf.txt, A-AFFY-36.adf.txt
R ExpressionSetE-GEOD-10428.eSet.r
Links