E-BUGS-124 - Comparative genomic hybridization by array of Staphylococcus aureus CC398 clade associated with human-to-human transmission

Status
Released on 29 October 2012, last updated on 1 May 2014
Organism
Staphylococcus aureus
Samples (34)
Array (1)
Protocols (5)
Description
Staphylococcus aureus clonal complex 398 (CC398) isolates colonize livestock and can spread to human contacts. Genetic analysis of isolates epidemiologically associated with human-to-human, but not livestock, transmission in multiple countries and continents identified a common clade that was negative for tet(M) and positive for bacteriophage 3. Another group of human-to-human-transmitted isolates belonged to the common livestock-associated clade but had acquired a unique φ7 bacteriophage. [Data is also available from http://bugs.sgul.ac.uk/E-BUGS-124]
Experiment types
comparative genomic hybridization by array, strain or line
Contact
Citation
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-BUGS-124.idf.txt
Sample and data relationshipE-BUGS-124.sdrf.txt
Raw data (2)E-BUGS-124.raw.1.zip, E-BUGS-124.raw.2.zip
Array designA-BUGS-38.adf.txt
Links