E-ATMX-28 - Transcription profiling of Arabidopsis seedlings treated with the herbicide methyl viologen

Status
Released on 8 January 2008, last updated on 1 May 2014
Organism
Arabidopsis thaliana
Samples (4)
Array (1)
Protocols (7)
Description
We exposed plants to methyl viologen (MV), a redox cycling herbicide in the light, and perform biochemical and Affymetrix ATH1 GeneChip experiments under conditions in which photosynthesis was active and the antioxidant response well conserved. Samples of total RNA were obtained from a pool of 25 Arabidopsis specimens from two independent biological replicates from the aerial parts of 2h MV-treated and non-treated control seedlings.
Experiment types
transcription profiling by array, co-expression, compound treatment
Contact
Citation
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-ATMX-28.idf.txt
Sample and data relationshipE-ATMX-28.sdrf.txt
Raw data (1)E-ATMX-28.raw.1.zip
Processed data (1)E-ATMX-28.processed.1.zip
Experiment designE-ATMX-28.biosamples.png, E-ATMX-28.biosamples.svg
Array designA-AFFY-2.adf.txt
R ExpressionSetE-ATMX-28.eSet.r
Links