E-ATMX-13 - Transcription profiling by array of Arabidopsis cell suspensions after treatment with methyl jasmonate

Status
Released on 30 December 2007, last updated on 1 May 2014
Organism
Arabidopsis thaliana
Samples (14)
Array (1)
Protocols (6)
Description
The transcriptional response of Arabidopsis thaliana cell suspensions following treatment with the stress hormone methyl jasmonate (MeJA) was monitored over time 16 hours after subcultivation. Three time points were included: 30 minutes, 2 hours and 6 hours after elicitation with 50µm MeJA or DMSO as a control.
Experiment types
transcription profiling by array, co-expression, compound treatment, stimulus or stress, time series
Contact
Citations
Mapping methyl jasmonate-mediated transcriptional reprogramming of metabolism and cell cycle progression in cultured Arabidopsis cells. Pauwels, Laurens; Morreel, Kris; De Witte, Emilie; Lammertyn, Freya; Van Montagu, Marc; Boerjan, Wout; Inze, Dirk; Goossens, Alain.
The RST and PARP-like domain containing SRO protein family: analysis of protein structure, function and conservation in land plants. Jaspers P, Overmyer K, Wrzaczek M, Vainonen JP, Blomster T, Salojärvi J, Reddy RA, Kangasjärvi J. :170 (2010), Europe PMC 20226034
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-ATMX-13.idf.txt
Sample and data relationshipE-ATMX-13.sdrf.txt
Raw data (1)E-ATMX-13.raw.1.zip
Processed data (1)E-ATMX-13.processed.1.zip
Experiment designE-ATMX-13.biosamples.png, E-ATMX-13.biosamples.svg
Array designA-AFFY-2.adf.txt
R ExpressionSetE-ATMX-13.eSet.r
Links