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AccessionTitleTypeOrganismAssaysReleasedProcessedRawViewsAtlas
Klhl6 deficiency impairs transitional B cell survival and differentiation
transcription profiling by array
Mus musculus
12
Today
-
2
-
Single-cell RNA-seq of of human dermal fibroblasts (supplementary - different stimulation conditions of dsRNA)
RNA-seq of coding RNA from single cells
Homo sapiens
1920
Yesterday
ENA
-
-
Single-cell RNA-seq of dermal fibroblasts (5 human individuals - IFNB stimulation)
RNA-seq of coding RNA from single cells
Homo sapiens
681
Yesterday
ENA
-
-
Single-cell RNA-seq of of dermal fibroblasts (supplementary - human fibroblasts stimulation with dsRNA)
RNA-seq of coding RNA from single cells
Homo sapiens
590
Yesterday
ENA
-
-
Bulk RNA-seq of of human dermal fibroblasts from up to 66 individuals (supplementary)
RNA-seq of coding RNA
Homo sapiens
168
Yesterday
ENA
-
-
Single-cell RNA-seq of of bone marrow derived mononuclear phagocytes derived from mouse; rat; rabbit or pig
RNA-seq of coding RNA from single cells
Mus musculus, Oryctolagus cuniculus, Rattus norvegicus, Sus scrofa
68
Yesterday
ENA
-
-
Transcriptome of Trypanosome brucei after PUF2 Knock-down - polysome fractions
RNA-seq of coding RNA
Trypanosoma brucei
3
Yesterday
-
ENA
-
-
RNA-seq of mouse EL4 cells overexpressing Israa gene product in comparison with Mock-transfected control cells
RNA-seq of coding RNA
Mus musculus
2
15/07/2018
-
ENA
-
-
Transcriptomic effects of long-term pantethine treatment in the mouse Alzheimer's disease 5XFAD model
transcription profiling by array
Mus musculus
12
15/07/2018
-
-
-
RNA-seq of human neurons derived from H9 embryonic stem cell lines treated with BDNF, TrkB agonist ZEB 85 or NT4 against untreated controls
RNA-seq of coding RNA
Homo sapiens
192
13/07/2018
ENA
-
-
RNA-seq of mouse heart that is both heart SOD2 knockout and deficient for mitochondrial DNA repair
RNA-seq of coding RNA
Mus musculus
19
13/07/2018
-
ENA
-
-
DNA-seq of mitochondrial DNA from mouse heart that is both heart SOD2 knockout and deficient for mitochondrial DNA repair
DNA-seq
Mus musculus
43
13/07/2018
-
ENA
-
-
DNA-seq of mitochondrial DNA from liver of OGG1 and MUTYH deficient mice that have been bred for five consecutive generations
DNA-seq
Mus musculus
30
13/07/2018
-
ENA
-
-
Binding of the Zika virus genome to endogenous human transcripts
RNA-seq of non coding RNA
Homo sapiens
18
13/07/2018
-
ENA
-
-
Whole-exome sequencing of genomic DNA extracted from patient-derived melanoma cell lines grown in vitro
DNA-seq
Homo sapiens
8
12/07/2018
ENA
-
-
miRNA profiling array results in serum RNA (healthy volunteers and breast tumor patients)
microRNA profiling by array
Homo sapiens
7
12/07/2018
-
-
-
Promoter capture and whole genome in situ Hi-C of human iPSC and iPSC-derived cardiomyocytes from an Yoruban individual (NA19101)
Hi-C
Homo sapiens
12
11/07/2018
ENA
-
-
Gene expression profiling by RNA-seq of human iPSC and iPSC-derived cardiomyocytes from an Yoruban individual (NA19101)
RNA-seq of coding RNA
Homo sapiens
6
11/07/2018
ENA
-
-
RNA libraries of sorted CD8+ memory T cells from the spleen and RNA libraries of sorted IELs from the small intestine of C57BL/6J mice
RNA-seq of coding RNA
Mus musculus
6
10/07/2018
-
ENA
-
-
iPSC-derived macrophages effectively treat pulmonary alveolar proteinosis in Csf2rb-deficient mice
RNA-seq of coding RNA
Mus musculus
10
10/07/2018
ENA
8
-
RNA-seq of human skin lesions diagnosed as actinic keratosis, intraepidermal carcinoma or squamous cell carcinoma
RNA-seq of coding RNA
Homo sapiens
25
09/07/2018
ENA
11
-
Massively parallel single-cell RNA-sequencing of K14E7 transgenic and wildype C57BL/6 mice
RNA-seq of coding RNA from single cells
Mus musculus
4
09/07/2018
ENA
9
-
RNA-seq of metabolically labelled RNA by 4-thiouracil from mouse tissues
RNA-seq of coding RNA
Mus musculus
18
09/07/2018
-
ENA
4
-
Single cell sequencing of lung carcinoma
RNA-seq of coding RNA from single cells
Homo sapiens
19
09/07/2018
-
24
-
SNP array Multi-omics molecular profiling of primary prostate adenocarcinoma
genotyping by array
Homo sapiens
66
09/07/2018
-
7
-
SCRB-seq comparison with TruSeq on bulk RNA-seq human LCL (DMSO) and BAY treated LCL (BAY)
RNA-seq of coding RNA
Homo sapiens
12
07/07/2018
-
ENA
16
-
Single-cell RNA-seq of ex vivo CD45-negative skin resident-cells using microfluidic droplet capture
RNA-seq of coding RNA
Homo sapiens
8
06/07/2018
-
10
-
Bulk RNA-seq of of bone marrow derived mononuclear phagocytes
RNA-seq of coding RNA
Mus musculus, Oryctolagus cuniculus, Rattus norvegicus, Sus scrofa
73
06/07/2018
-
ENA
15
-
Single-cell RNA-seq of dermal fibroblasts stimulated with dsRNA (poly I:C) in a time course of 0, 4 and 8 hours
RNA-seq of coding RNA from single cells
Homo sapiens, Macaca mulatta, Mus musculus, Rattus norvegicus
240
06/07/2018
ENA
13
-
Single-cell RNA-seq of of dermal fibroblasts using microfluidic droplet capture (stimulated cells)
RNA-seq of coding RNA from single cells
Homo sapiens
2130
06/07/2018
ENA
12
-
Single-cell RNA-seq of of dermal fibroblasts using microfluidic droplet capture (unstimulated cells)
RNA-seq of coding RNA from single cells
Homo sapiens
2553
06/07/2018
ENA
13
-
Single-cell RNA-seq of dermal fibroblasts stimulated with dsRNA (poly I:C) in a time course of 0, 2, 4 and 8 hours
RNA-seq of coding RNA from single cells
Homo sapiens, Macaca mulatta, Mus musculus, Rattus norvegicus
728
06/07/2018
ENA
17
-
Bulk RNA-seq of dermal fibroblasts after stimulation with interferon or dsRNA (poly I:C)
RNA-seq of coding RNA
Homo sapiens, Macaca mulatta, Mus musculus, Rattus norvegicus
79
06/07/2018
ENA
13
-
ChIP-seq of H3K4me3 and H3K27ac of dermal fibroblasts with and without dsRNA (poly I:C) stimulation
ChIP-seq
Homo sapiens, Macaca mulatta, Mus musculus, Rattus norvegicus
52
06/07/2018
ENA
15
-
The effect of high cholesterol diet on expression level of myocardial microRNAs
microRNA profiling by array
Rattus norvegicus
6
06/07/2018
-
9
-
ChIP-Seq of BCL11A and SOX2 in lung squamous cell carcinoma (LUSC) LK-2 cell line with or without BCL11A knockdown
ChIP-seq
Homo sapiens
5
05/07/2018
ENA
21
-
The gut microbiota promotes hepatic fatty acid desaturation and elongation in mice
transcription profiling by array
Mus musculus
12
05/07/2018
-
15
-
RNA-seq experiment of isolated endothelial and microglial cells from hippocampal DG and CA1 regions under control and VEGF overexpression conditions
RNA-seq of coding RNA
Mus musculus
16
04/07/2018
ENA
17
-
Transcriptional response to Rosiglitazone in adipocyte progenitors isolated from WT and Cited4-KO scWAT
transcription profiling by array
Mus musculus
12
04/07/2018
-
17
-
Transcriptomic profiling of human neuromesodermal-like cells and spinal cord progenitors derived in vitro from H9 ES cell line
RNA-seq of coding RNA
Homo sapiens
6
04/07/2018
ENA
15
-
RNA-seq of primary human M2-polarized macrophages cultured in either high-concentration or low-concentration type I collagen
RNA-seq of coding RNA
Homo sapiens
6
04/07/2018
ENA
34
-
RNAseq of the human gut commensal Bacteroides thetaiotaomicron wildtype, bt0700 and bt0700 bt3998 (ppGpp0) strains across three conditions: glucose minimal medium, 1h of carbon starvation, and mouse gut colonization
RNA-seq of coding RNA
Bacteroides thetaiotaomicron VPI-5482
29
04/07/2018
ENA
28
-
RNA-seq analysis of anti-malarial drug chemotherapy of murine experimental Cerebral Malaria (ECM)
RNA-seq of coding RNA
Mus musculus
39
03/07/2018
-
ENA
20
-
SNP array profiling of leiomyosarcoma
transcription profiling by array
Homo sapiens
26
02/07/2018
-
24
-
Identification of driver genes in uterine leiomyosarcoma: whole-genome sequencing
DNA-seq
Homo sapiens
4
02/07/2018
-
22
-
Identification of driver genes in uterine leiomyosarcoma: low-coverage WGS
DNA-seq
Homo sapiens
35
02/07/2018
-
ENA
23
-
Identification of driver genes in uterine leiomyosarcoma: RNA seq
RNA-seq of coding RNA
Homo sapiens
30
02/07/2018
-
ENA
26
-
RNA-seq of Fusarium graminearum under predation by the springtail Folsomia candida against untreated controls
RNA-seq of coding RNA
Fusarium graminearum
8
01/07/2018
-
ENA
30
-
RNA-seq of Streptococcus pyogenes biofilms
RNA-seq of coding RNA
Streptococcus pyogenes
18
01/07/2018
-
ENA
26
-
RNAseq of human bone marrow mesenchymal stem cells in co-culture with endothelial cells
RNA-seq of coding RNA
Homo sapiens
6
01/07/2018
-
ENA
36
-
Meiotic crossover landscape within the RAC1 disease resistance gene
DNA-seq
Arabidopsis thaliana
10
01/07/2018
-
ENA
20
-
Whole-genome shallow-sequencing of HPV-positive and HPV-negative vulvar lesions
DNA-seq
Homo sapiens
86
01/07/2018
ENA
27
-
Transcription profiling of irradiated non-adherent anoikis-resistant DU145 and MCF-7 cells and 5-azacytidine-treated non-adherent anoikis-resistant HeLa cells in contrast to control (non-irradiated, non-treated) cells
transcription profiling by array
Homo sapiens
26
01/07/2018
-
19
-
Development of a small molecule for treatment of castration resistant prostate cancer via androgen receptor and IL6/STAT3 pathways
transcription profiling by array
Homo sapiens
12
01/07/2018
-
21
-
Microarray of four types of mouse immune samples including those of the spleen (SP), bone marrow (BM), lymph node (LN), and peripheral blood mononuclear cell (PBMC) and three tumor tissues including MC38, EL4 and LLC
transcription profiling by array
Mus musculus
21
30/06/2018
-
22
-
Ribosome profiling of budding yeast Saccharomyces cerevisiae in eEF3 depleted conditions
RNA-seq of coding RNA
Saccharomyces cerevisiae
8
30/06/2018
-
ENA
21
-
DNA methylation in acute sleep loss in humans
transcription profiling by array
Homo sapiens
60
30/06/2018
-
16
-
RNA-seq in acute sleep loss in humans
RNA-seq of coding RNA
Homo sapiens
60
30/06/2018
-
17
-
Single cell sequencing of 3 lung carcinomas
RNA-seq of coding RNA from single cells
Homo sapiens
12
30/06/2018
-
-
22
-
Transcriptional profiling of blood exposure response gene signature across clinical studies on The Tobacco Heating System 2.2 (THS 2.2) dataset 2
transcription profiling by array
Homo sapiens
378
30/06/2018
17
-
Transcriptional profiling of blood exposure response gene signature across clinical studies on The Tobacco Heating System 2.2 (THS 2.2) dataset 1
transcription profiling by array
Homo sapiens
296
30/06/2018
16
-
RNA-seq comparison of gene expression in enteroids derived of fresh or frozen human intestinal biopsies
RNA-seq of coding RNA
Homo sapiens
129
30/06/2018
-
ENA
16
-
RNA-seq of Staphylococcus aureus and Staphylococcus aureus challenged with squalene compared to control growth
RNA-seq of coding RNA
Staphylococcus aureus, Staphylococcus epidermidis
12
30/06/2018
ENA
13
-
CXCR3+ Treg cells suppress Th1-immune responses through expression of the co-inhibitory receptors CD85k and Lag-3
RNA-seq of coding RNA
Mus musculus
7
30/06/2018
-
ENA
13
-
Transcription profiling by array of the effect of rapamycin on Anopheles gambiae strains 2La or 2L+
transcription profiling by array
Anopheles gambiae
6
30/06/2018
-
13
-
Analysis of Zika Virus gene expression by Ribosome profiling and RNA sequencing
RNA-seq of coding RNA
Aedes albopictus, Chlorocebus sabaeus
10
30/06/2018
-
ENA
13
-
ChIP-Seq (H3K4me3, H3K27me3) of steady-state splenic classical dendritic cells from wild type, germ-free and IFNAR knockout mice
ChIP-seq
Mus musculus
18
30/06/2018
-
ENA
11
-
RNA-Seq of steady-state and LPS stimulated splenic classical dendritic cells from wild type, germ-free and IFNAR knockout mice
RNA-seq of coding RNA
Mus musculus
12
30/06/2018
-
ENA
12
-
Mutation in familial platelet disorder with predisposition to myeloid malignancies
DNA-seq
Homo sapiens
1
29/06/2018
-
ENA
17
-
RNA-seq of Candida intermedia growing in different media
RNA-seq of coding RNA
[Candida] intermedia
41
29/06/2018
-
ENA
12
-
RNA-seq of mouse crypts to investigate Rorc gamma t-deficient mice tissue repair compared to wild type controls
RNA-seq of coding RNA
Mus musculus
24
29/06/2018
-
ENA
12
-
Transcriptome profiling of Sinorhizobium meliloti Rm1021 grown in semisolid media (MM) in presence of 2-tridecanone (2-TDC)
transcription profiling by array
Sinorhizobium meliloti
3
29/06/2018
-
12
-
Gene expression profile of microdissected mucinous cystic neoplasms of the pancreas
transcription profiling by array
Homo sapiens
6
28/06/2018
-
12
-
Gene-expression profile of human embryonic germ cells
transcription profiling by array
Homo sapiens
11
28/06/2018
-
13
-
Gene expression profile of microdissected mucinous ovarian tumors
transcription profiling by array
Homo sapiens
17
28/06/2018
-
11
-
Anopheles coluzzii small RNAseq
RNA-seq of non coding RNA
Anopheles coluzzii
16
28/06/2018
-
ENA
13
-
Anopheles coluzzii RNAseq
RNA-seq of coding RNA
Anopheles coluzzii
16
28/06/2018
-
ENA
17
-
Molecular Profiling of Chemoresistant Slow Cycling Cancer-Initiating Cells from human colorectal cancer, glioma and melanoma
transcription profiling by array
Homo sapiens
79
28/06/2018
24
-
Mapping hnRNP H binding sites on RON wildtype minigene and RON mutant minigenes via iCLIP
CLIP-seq
Homo sapiens
10
27/06/2018
-
ENA
16
-
Mapping hnRNP H binding sites on the RON wildtype minigene via iCLIP
CLIP-seq
Homo sapiens
2
27/06/2018
-
ENA
17
-
DNA-seq of a library of mutated minigene reporters
DNA-seq
Homo sapiens
2
27/06/2018
-
ENA
16
-
RNA-seq of the spliced products from a mutated minigene reporter library under control and hnRNP H knockdown conditions in MCF-7 cells
RNA-seq of coding RNA
Homo sapiens
6
27/06/2018
-
ENA
16
-
RNA-seq of the spliced products from a mutated minigene reporter library in HEK293T cells
RNA-seq of coding RNA
Homo sapiens
3
27/06/2018
-
ENA
16
-
Lotus japonicus response to Nod factor: wild type and nfre mutants
RNA-seq of coding RNA
Lotus japonicus
12
27/06/2018
-
ENA
20
-
RNA-seq of hepatocytes obtained through step-wise differentiation of hIPSCs from a patient with A1AT deficiency and its point mutation-corrected isogenic hIPSC line. Comparison to primary hepatocytes from a healthy donor and an A1AT-deficient patient
RNA-seq of coding RNA
Homo sapiens
8
26/06/2018
-
ENA
16
-
Expression data from draining lymph node and muscle of mice immunised with AS03 or PBS
transcription profiling by array
Mus musculus
35
26/06/2018
-
15
-
Gene expression profiling of patient-derived glioblastoma stem cell cultures
transcription profiling by array
Homo sapiens
16
26/06/2018
-
23
-
RNA-seq of Bacillus subtilis (i) sigI-rsgI knock-out strain, (ii) rsgI disrupted strain, and (iii) wt strains during growth at 52°C and 37°C
RNA-seq of coding RNA
Bacillus subtilis subsp. subtilis str. 168
18
26/06/2018
-
ENA
30
-
RNA-Seq of RAW 264.7 cells stimulated with the AS03 adjuvant after 4 and 8 hours
RNA-seq of coding RNA
Mus musculus
48
26/06/2018
ENA
27
-
Single-cell RNA-seq data of mammary gland epithelial cells from different gestational stages to detect and remove barcode swapping
RNA-seq of coding RNA from single cells
Mus musculus
160
25/06/2018
ENA
20
-
ChIP-seq analysis of bZIP73 binding sites in rice seedlings (Zhonghua11)
ChIP-seq
Oryza sativa Japonica Group
4
25/06/2018
-
ENA
17
-
NAT10 inhibition improves cellular phenotypes of Hutchinson-Gilford progeria syndrome by restoring the Transportin-1 pathway
transcription profiling by array
Homo sapiens
36
25/06/2018
-
15
-
Single-cell RNA sequencing of OT-I CD8+ T cells after stimulation with different affinity ligands
RNA-seq of coding RNA
Mus musculus
952
25/06/2018
ENA
46
-
ChIP-seq for Prep on whole zebrafish embryos at 3.5 and 12hpf
ChIP-seq
Danio rerio
8
25/06/2018
ENA
15
-
Foxp3+ regulatory T cells control psoriasiform skin inflammation by restraining a type 1 interferon driven CD8+ T cell response
transcription profiling by array
Mus musculus
18
24/06/2018
-
24
-
Transcriptomic analysis of the developing cerebellum in a mouse model for SRD5A3-CDG
transcription profiling by array
Mus musculus
8
24/06/2018
-
22
-
Methylation array for Multi-omics molecular profiling of primary prostate adenocarcinoma
methylation profiling by array
Homo sapiens
390
24/06/2018
18
-
Expression array for Multi-omics molecular profiling of primary prostate adenocarcinoma
transcription profiling by array
Homo sapiens
141
24/06/2018
-
15
-
SNP array for Multi-omics molecular profiling of primary prostate adenocarcinoma
genotyping by array
Homo sapiens
132
24/06/2018
-
16
-
Genome-wide maps of nuclear lamina interactions in HeLa cells identified using MethylAdenine IDentification (MadID)
MeDIP-seq
Homo sapiens
3
22/06/2018
ENA
22
-
Gene expression profiles of human breast cancer cell lines MCF-7, T47D and MDA-MB-231 co-cultured with 3T3-L1 adipocytes
transcription profiling by array
Homo sapiens
18
22/06/2018
30
-
Single cell RNA-sequencing of PBMC derived B cells from human healthy donor
RNA-seq of coding RNA from single cells
Homo sapiens
117
22/06/2018
-
ENA
29
-
RNA-Seq of murine lung tissue and blood treated with S. pneumoniae TIGR4 or S. aureus USA300 against PBS controls
RNA-seq of coding RNA
Mus musculus
36
22/06/2018
-
ENA
24
-
Single cell RNA-sequencing of T cells to examine barcode swapping
RNA-seq of coding RNA from single cells
Mus musculus
960
21/06/2018
ENA
48
-
RNA-seq of cultured parasites supplemented with sodium L-lactate
RNA-seq of coding RNA
Plasmodium falciparum 3D7
9
20/06/2018
-
ENA
38
-
Dual RNA-seq of peripheral blood from Gambian children with severe or uncomplicated Plasmodium falciparum malaria
RNA-seq of coding RNA
Homo sapiens
53
20/06/2018
-
ENA
30
-
microRNA array on plasma from two diffuse large B-cell lymphoma patients and one healthy donor
microRNA profiling by array
Homo sapiens
9
20/06/2018
20
-
TAP RNA-IP - MKT1
RNA-seq of coding RNA
Trypanosoma brucei
4
18/06/2018
-
ENA
32
-
TAP RNA-IP - ZC3H22
RNA-seq of coding RNA
Trypanosoma brucei
4
18/06/2018
-
ENA
31
-
TAP RNA-IP - MKT1L
RNA-seq of coding RNA
Trypanosoma brucei
4
18/06/2018
-
ENA
34
-
Whole transcriptome analysis of rat peritoneal cells in a TGFβ1 induced mesothelial-to-mesenchymal transition
RNA-seq of coding RNA
Rattus norvegicus
10
18/06/2018
-
ENA
28
-
RNA-seq of blood taken from patients suffering from sleeping sickness and infected with Trypanosoma brucei rhodesiense
RNA-seq of coding RNA
Homo sapiens
9
18/06/2018
-
ENA
30
-
Single-cell RNA-seq of de-differentiated mammary adipocytes during lactation
RNA-seq of coding RNA from single cells
Mus musculus
79
17/06/2018
ENA
34
-
ChIP-seq of Mycobacterium smegmatis PafBC to identify in vivo binding sites
ChIP-seq
Mycobacterium smegmatis str. MC2 155
16
17/06/2018
ENA
34
-
RNA-seq of Mycobacterium smegmatis mc2-155 SMR5 wild-type vs. a pafBC deletion strain under different growth/stress conditions
RNA-seq of coding RNA
Mycobacterium smegmatis str. MC2 155
12
17/06/2018
ENA
37
-
modified iCLIP experiment with the addition of a 5'marker to identify read-through reads
CLIP-seq
Homo sapiens
6
15/06/2018
-
ENA
36
-
RNA-seq of mouse wildtype HSCs purified from recipient mice co-transplanted with wildtype or different types of lymphoid cell deficient HSCs
RNA-seq of coding RNA
Mus musculus
11
14/06/2018
-
ENA
34
-
RNA-seq of wild-type and Tbx20 homozygous knockout E11.5 mouse cardiomyocytes to study Tbx20's roles in embryonic and adult mouse heart function
RNA-seq of coding RNA
Mus musculus
8
14/06/2018
-
ENA
55
-
RNA-seq across tissues in four Notothenioid species (Antarctic icefish)
RNA-seq of coding RNA
Harpagifer antarcticus, Neopagetopsis ionah, Parachaenichthys charcoti, Pseudochaenichthys georgianus
58
13/06/2018
-
ENA
40
-
RNA-seq of Myd88 cKO fibroblast reticular cells in mouse omentum on exposure to Salmonella typhi OmpC/F to investigate adaptive immunity
RNA-seq of coding RNA
Mus musculus
13
12/06/2018
-
ENA
45
-
Cell-of-origin epigenetic signatures are maintained during colorectal carcinogenesis
methylation profiling by array
Homo sapiens
145
12/06/2018
-
49
-
RNA-Seq on Malus domestica Braeburn x Cameo lines resistant and susceptible to bitter pit disorder
RNA-seq of coding RNA
Malus domestica
4
12/06/2018
-
ENA
40
-
Methylation arrays delineate the extent of 5mC and 5hmC in human brain and glioma samples
methylation profiling by array
Homo sapiens
56
12/06/2018
-
41
-
RNA-seq analysis of several in vitro models of hepatocyte function: Project 4 of Open Targets - Epigenomes of Cell Lines
RNA-seq of coding RNA
Homo sapiens
18
11/06/2018
-
ENA
44
-
RNA-seq analysis of two common T cell models, HUT78 and JURKAT E6.1: Project 5 of Open Targets - Epigenomes of Cell Lines
RNA-seq of coding RNA
Homo sapiens
8
11/06/2018
-
ENA
41
-
RNA-seq analysis of several immortalized B cell lines (Namalwa, Daudi, Ramos, Raji, Toledo, ARH-77): Project 6 of Open Targets - Epigenomes of Cell Lines
RNA-seq of coding RNA
Homo sapiens
12
11/06/2018
-
ENA
34
-
Microarray analyses of mouse dorsal root ganglia tissue for six different pain models
transcription profiling by array
Mus musculus
47
11/06/2018
-
36
-
Transcriptional analysis of differential immune and inflammatory responses to Sarcoptes scabiei infestation in a porcine model
transcription profiling by array
Sus scrofa
60
11/06/2018
-
41
-
Transcription profiling by array of CD4+ T cell or CD14 positive monocyte lysates or whole blood samples taken from kidney transplant recipients treated with or without Belimumab
transcription profiling by array
Homo sapiens
171
11/06/2018
-
33
-
ChIP-seq experiment to determine the genomic binding sites of mutant V5-tagged ZFHX2 R1913K protein in a stable-expressing human SH-SY5Y neuroblastoma cell line
ChIP-seq
Homo sapiens
3
11/06/2018
-
ENA
35
-
Microarray of BAC transgenic Zfhx2 p.R1907K mutant mice (4 genomic copies) versus wild-types
transcription profiling by array
Mus musculus
12
11/06/2018
-
33
-
Sequencing 5-hydroxymethyluracil via chemical modification and mismatch formation
DNA-seq
synthetic construct
42
08/06/2018
-
ENA
72
-
Methylation arrays (MethylationEPIC) reveal specific DNA hypermethylation of T cells during human hematopoietic differentiation
methylation profiling by array
Homo sapiens
10
08/06/2018
42
-
Microarray analysis of transcription changes in zebrafish embryos of different developmental ages after exposure to cyanide
transcription profiling by array
Danio rerio
12
08/06/2018
44
-
ATAC-seq of HEK293 cells with Alu-motif targeted dCas9GFP
ATAC-seq
Homo sapiens
9
07/06/2018
-
ENA
39
-
DNA methylome analysis of human pluripotent stem cells reprogrammed with CRISPRa
methylation profiling by array
Homo sapiens
64
07/06/2018
-
39
-
STRT RNAseq of human foreskin fibroblasts undergoing CRISPRa reprogramming
RNA-seq of coding RNA
Homo sapiens
44
07/06/2018
-
ENA
35
-
STRT RNAseq of pluripotent stem cells reprogrammed with CRISPRa
RNA-seq of coding RNA
Homo sapiens
26
07/06/2018
-
ENA
41
-
Possible role of Adrenomedullin and PLAUR in Hereditary Angioedema attacks: a transcriptomic analysis
transcription profiling by array
Homo sapiens
25
07/06/2018
-
32
-
Microarray on wild-type and mutant Hesx1 embryonic stem (ES) cells cultured in serum/LIF
transcription profiling by array
Mus musculus
3
07/06/2018
-
31
-
TMC-SNPdb: An Indian germline variant dataset derived from whole exome sequence
DNA-seq
Homo sapiens
62
06/06/2018
-
ENA
35
-
Transcription profiling by array to investigate psoriasis risk and non-risk isoforms of CCHCR1 in HEK293 cells
transcription profiling by array
Homo sapiens
15
04/06/2018
52
-
Covalent linkage of the DNA repair template to the CRISPR-Cas9 nuclease enhances homology-directed repair
DNA-seq
Homo sapiens, Mus musculus
105
04/06/2018
-
ENA
42
-
Time series RNAseq of apical tissues along 4 developmental stages of development (I-III : vegetative stage; IV: sexually mature) in Mercurialis annua
RNA-seq of coding RNA
Mercurialis annua
24
04/06/2018
-
ENA
40
-
RNASeq of mature leaf and root tissues, before and after flowering, in Mercurialis annua
RNA-seq of coding RNA
Mercurialis annua
40
04/06/2018
-
ENA
34
-
RNA-Seq of BW25113 Escherichia coli (wild-type and a mutant lacking yeaG) experiencing initial and sustained nitrogen starvation in Gutnick minimal media
RNA-seq of coding RNA
Escherichia coli K-12
14
04/06/2018
-
ENA
44
-
Genomic sequencing of T. brucei cell lines resistant to AN7973
DNA-seq
Trypanosoma brucei brucei
5
04/06/2018
ENA
35
-
Profiling of mRNA expression in irritable bowel syndrome vs healthy controls
transcription profiling by array
Homo sapiens
30
03/06/2018
53
-
Transcription profiling by array of wild type pea seeds and seeds with embryo-specific expression of a bacterial trehalose 6-phosphate phosphatase (TPP), encoded by the otsB gene to investigate the influence of decreased T6P content on gene expression in developing cotyledons
transcription profiling by array
Pisum sativum
23
01/06/2018
50
-
RNA-seq of primary murine (C57BL/6J) LSK cells overexpressing miR-10a or miR-335
RNA-seq of coding RNA
Mus musculus
9
01/06/2018
-
ENA
42
-
RNA-seq to investigate impact of treatment of KRAS mutant NCI-H2009 lung adenocarcinoma cells with the multi-ERBB inhibitor Neratinib
RNA-seq of coding RNA
Homo sapiens
6
01/06/2018
-
ENA
46
-
RNA-seq to investigate impact of treatment of KRAS mutant NCI-H358 lung adenocarcinoma cells with the multi-ERBB inhibitor Neratinib
RNA-seq of coding RNA
Homo sapiens
6
01/06/2018
-
ENA
48
-
RNA-seq to investigate impact of treatment of KRAS mutant A549 lung adenocarcinoma cells with the multi-ERBB inhibitor Neratinib
RNA-seq of coding RNA
Homo sapiens
6
01/06/2018
-
ENA
38
-
RBM7 activates P-TEFb for a pro-survival transcriptional response to DNA damage
CLIP-seq
Homo sapiens
6
01/06/2018
-
ENA
42
-
Progression of KRas^G12D;Rosa26-MYC tumours to invasive disease
RNA-seq of coding RNA
Mus musculus
8
01/06/2018
-
ENA
34
-
Transcriptome profiling of wild type, K159/298Q- and K159/298R- C/EBPα expressing mouse cells
RNA-seq of coding RNA
Mus musculus
9
01/06/2018
-
ENA
44
-
Transcription profiling by array of fetal RNA from amniotic fluid of twin-to-twin syndrome pregnancies compared to control single pregnancies
transcription profiling by array
Homo sapiens
32
01/06/2018
-
32
-
RNAseq of roots and leaves of tender wheat (Triticum aestivum cv chinese Spring) during interactions with mycorhizal fungi (Funneliformis mossae) with and without a pathogen attack by Xanthomonas translucens
RNA-seq of coding RNA
Triticum aestivum
12
01/06/2018
-
ENA
39
-
RNA-seq analysis of EpiSCs undergoing differentiation induced by EB formation
RNA-seq of coding RNA
Mus musculus
6
01/06/2018
ENA
42
-
ChIP-seq analysis of Esrrb, Nanog, Oct4, and Sox2 in EpiSCs undergoing reprogramming
ChIP-seq
Mus musculus
25
01/06/2018
ENA
91
-
Microarray analysis of EpiSCs undergoing reprogramming by Esrrb
transcription profiling by array
Mus musculus
34
01/06/2018
-
37
-
Differentiating liposarcoma from lipoma using a simple blood test: A miRNA signature
transcription profiling by array
Homo sapiens
10
01/06/2018
-
38
-
Nucleosome occupancy during NuRD complex induction
MNase-seq
Mus musculus
9
31/05/2018
-
ENA
32
-
Transcription profiling by RNA-seq during NuRD complex induction in mouse embryonic stem cells
RNA-seq of coding RNA
Mus musculus
24
31/05/2018
-
ENA
30
-
RNA-seq profiling of nascent transcription during NuRD complex induction in mouse embryonic stem cells
RNA-seq of coding RNA
Mus musculus
18
31/05/2018
-
ENA
26
-
Transcription factor binding and epigenetic modifications during NuRD complex induction
ChIP-seq
Mus musculus
126
31/05/2018
-
ENA
118
-
ChIP-seq of CIC (Capicua) and histone marks (H3K9ac, H3K27ac and H3K4me1) in glioma neural stem cells (GNS) G144, human foetal neural stem cells (hNSC) and mouse embryonic stem cells (mESC),
ChIP-seq
Homo sapiens, Mus musculus
33
31/05/2018
ENA
97
-
RNA-seq of Glioma Neural Stem (GNS) cell line G144 after MEK inhibition in wild type (WT) and CIC (Capicua) depleted cells
RNA-seq of coding RNA
Homo sapiens
27
31/05/2018
-
ENA
42
-
Transcription profiling by array of pulmonary gene expression in response to interleukin-22 during severe influenza
transcription profiling by array
Mus musculus
19
31/05/2018
-
20
-
Identification of target genes of Cud-type transcription factor, spaA, in a Dictyostelid social amoebae by ChIP-seq
ChIP-seq
Dictyostelium discoideum
6
31/05/2018
-
ENA
37
-
Whole Transcriptome sequencing TSCC (tongue squamous cell carcinoma)
RNA-seq of coding RNA
Homo sapiens
15
31/05/2018
-
ENA
35
-
Whole exome sequencing of TSCC (tongue squamous cell carcinoma)
DNA-seq
Homo sapiens
24
31/05/2018
-
ENA
22
-
scRNA-seq of mouse subcutaneous Lin- SVF cells
RNA-seq of coding RNA from single cells
Mus musculus
1
30/05/2018
-
39
-
Transcription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes
transcription profiling by array
Arabidopsis thaliana
12
29/05/2018
-
61
-
Hypothalamic DNA-methylation differences in Red Junglefowl divergently selected for reduced fear of humans
MeDIP-seq
Gallus gallus
12
29/05/2018
-
ENA
22
-
RNA-seq of PDAC tissues grown as patient-derived tumor xenografts
RNA-seq of coding RNA
Homo sapiens
24
29/05/2018
-
ENA
45
-
ChIP-seq of PDAC tissues grown as patient-derived tumor xenografts
ChIP-seq
Homo sapiens
144
29/05/2018
-
ENA
99
-
RNA-seq of mutant Mycobacterium neoaurum producing steroid intermediates compared with wild-type strain
RNA-seq of coding RNA
Mycobacterium neoaurum
5
26/05/2018
-
ENA
34
-
RNA-seq of an adult Porites rus colony derived from Indonesia
RNA-seq of coding RNA
Porites rus
1
25/05/2018
-
ENA
47
-
RNA-Seq of 293T cells depleted of U2AF-related proteins
RNA-seq of coding RNA
Homo sapiens
6
25/05/2018
-
ENA
69
-
Copy number variants analysis of heterotaxy syndrome patients with congenital heart defects
genotyping by array
Homo sapiens
63
24/05/2018
-
32
-
Monocyte-derived IL-1 and IL-6 are differentially required for cytokine release syndrome and neurotoxicity by CAR-T cells
RNA-seq of coding RNA from single cells
Homo sapiens
4
24/05/2018
-
-
75
-
RNAseq of whole ovarian follicles from young and old mice
RNA-seq of coding RNA
Mus musculus
48
22/05/2018
-
ENA
39
-
Microarray of formalin-fixed, paraffin-embedded uninvolved terminal ileal tissue obtained from ileo-colic resection surgeries of Crohn’s disease and control patients
transcription profiling by array
Homo sapiens
136
22/05/2018
-
69
-
RNA-seq of formalin-fixed, paraffin-embedded uninvolved terminal ileal tissue obtained from ileo-colic resection surgeries of Crohns disease and control patients
RNA-seq of coding RNA
Homo sapiens
68
22/05/2018
ENA
79
-
RNA-seq on Hesx1+/+ and Hesx1-/- ES cells deprived of 2i/LIF for 24 hours
RNA-seq of coding RNA
Mus musculus
5
21/05/2018
-
ENA
41
-
PUF2 and UBP1 RNAi and pull-down in Trypanosoma brucei
RNA-seq of coding RNA
Trypanosoma brucei
6
21/05/2018
-
ENA
37
-
MIRNA - Integrative multi-omics survey of effects carbon-based engineered nanomaterials on lung derived cell-lines
transcription profiling by array
Homo sapiens
91
19/05/2018
83
-
DNA-METHYLATION - Integrative multi-omics survey of effects carbon-based engineered nanomaterials on lung derived cell-lines
transcription profiling by array
Homo sapiens
198
19/05/2018
74
-
MRNA-Integrative multi-omics survey of effects carbon-based engineered nanomaterials on lung derived cell-lines
transcription profiling by array
Homo sapiens
64
19/05/2018
94
-
Regulation of total and polysomal RNA expression in rat neonatal cardiac myocytes by H2O2
transcription profiling by array
Rattus norvegicus
16
17/05/2018
-
63
-
Haploid genetic screen for components of MLKL-mediated cell death
DNA-seq
Homo sapiens
2
16/05/2018
-
ENA
94
-
RNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL)
RNA-seq of coding RNA
Arabidopsis thaliana
9
16/05/2018
-
ENA
101
-
RNA-Seq of human aortic endothelial cells with lysophosphatidylinositol against untreated controls
RNA-seq of coding RNA
Homo sapiens
6
16/05/2018
-
ENA
87
-
RNA-Seq of human aortic endothelial cells with lysophosphatidylcholine against untreated controls
RNA-seq of coding RNA
Homo sapiens
2
16/05/2018
-
ENA
70
-
Microarray transcription profiling of healthy and PVYNTN infected potato tuber tissues (necrotic and non-necrotic)
transcription profiling by array
Solanum tuberosum
16
16/05/2018
56
-
Ribosome profiling and RNA sequencing of ED fibroblast cells in response to infection by equine torovirus, Berne strain
RNA-seq of coding RNA
Equus caballus
10
15/05/2018
-
ENA
49
-
Transcriptome analysis of khd-1, spen-1 and hub1-4 Arabidopsis mutants
RNA-seq of coding RNA
Arabidopsis thaliana
12
14/05/2018
ENA
91
-
BCL-2 levels do not predict azathioprine treatment response in inflammatory bowel disease, but inhibition induces lymphocyte apoptosis and ameliorates colitis in mice
RNA-seq of coding RNA
Homo sapiens
6
14/05/2018
ENA
81
-
Identification of the Tetracycline dependent genes in Salmonella enterica serovar Typhimurium SL1344 (R27)
transcription profiling by array
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
6
14/05/2018
-
48
-
RNA-seq of the anterior third (head) region of fifty pooled danio rerio embryos at the 15-somite stage following crispld2 morpholino knockdown compared to uninjected controls
RNA-seq of coding RNA
Danio rerio
2
13/05/2018
ENA
48
-
RNA-seq of myocytes from mice treated in vivo for 3 days with vehicle, angiotensin II, or phenylephrine
RNA-seq of coding RNA
Mus musculus
14
12/05/2018
ENA
61
-
Whole-genome methylation analysis (450k) of school aged children prenatally exposed to alcohol vs controls
methylation profiling by array
Homo sapiens
358
12/05/2018
72
-
Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
RNA-seq of coding RNA
Arabidopsis thaliana
24
12/05/2018
-
ENA
60
-
Illumina Infinium HumanMethylation450 BeadChip profiling of paediatric high grade gliomas from the HERBY clinical trial
methylation profiling by array
Homo sapiens
164
11/05/2018
-
86
-
Variation in RNA expression in a panel of 30 breast cancer cell lines
RNA-seq of coding RNA
Homo sapiens
30
11/05/2018
ENA
201
-
Expression profiling of mouse CD4+ T cells following Klf1 retrovirus vector transfection
RNA-seq of coding RNA
Mus musculus
12
10/05/2018
-
ENA
47
-
RNA-Seq of seed dormancy in red rice
RNA-seq of coding RNA
Oryza sativa
18
10/05/2018
-
ENA
131
-
Effects on adult testis of Sertoli cell-specific ablation of miR-17-92 in mouse embryos
RNA-seq of coding RNA
Mus musculus
6
10/05/2018
-
ENA
40
-
Transcription profiling by array of 60 pre-chemotherapy FFPE endoscopic oesophageal adenocarcinoma biopsies
transcription profiling by array
Homo sapiens
63
10/05/2018
-
60
-
Transcriptional profiling of human bronchial epithelial cell BEAS-2B exposed to diesel and biomass ultrafine particles
RNA-seq of coding RNA
Homo sapiens
45
09/05/2018
ENA
99
-
Microarray and transcript expression analysis of P. aeruginosa grown with or without bacterial (Exiguobacterium indicum SJ16) extracts
transcription profiling by array
Pseudomonas aeruginosa PAO1
2
08/05/2018
-
13
-
Gene expression data from 10 untreated human colon cancer cell lines
transcription profiling by array
Homo sapiens
20
08/05/2018
129
-
Single-cell RNA-seq of murine medullary thymic epithelial cells (mTECs)
RNA-seq of coding RNA from single cells
Mus musculus
164
08/05/2018
ENA
69
-
Thioredoxin DCC1 regulates shoot regeneration through modulating multiple genes expression by RNA-seq analyses in Arabidopsis
RNA-seq of coding RNA
Arabidopsis thaliana
6
06/05/2018
ENA
74
-
The expression profiles of miRNAs in H. pylori infected esophageal cells were analyzed by microarray
microRNA profiling by array
Homo sapiens
4
05/05/2018
-
73
-
RNA-seq of peri-infarct cortex of the rat dMCAO model of ischemic stroke treated with AAV7-hMANF or AAV7-GFP
RNA-seq of coding RNA
Rattus norvegicus
10
04/05/2018
-
ENA
80
-
RNA-seq of human ovarian adenocarcinoma cell line SKOV3 treated with bisphenol A (10 or 100 nM) against untreated controls
RNA-seq of coding RNA
Homo sapiens
9
04/05/2018
-
ENA
113
-
Single cell RNA-seq of WTC-CRISPRi human induced pluripotent stem cells
RNA-seq of coding RNA from single cells
Homo sapiens
5
03/05/2018
-
130
-
RNA-seq of HeLa-MZ cells treated with Wnt3a conditioned media for 0, 2 and 6 hours
RNA-seq of coding RNA
Homo sapiens
29
01/05/2018
-
ENA
117
-
RNA-seq to investigate differentially expressed genes in KPC mouse PDAC treated with CSF-1R small molecule inhibitor AZD7507 and/or the CXCR2 small molecule inhibitor AZD5069
RNA-seq of coding RNA
Mus musculus
58
01/05/2018
-
ENA
186
-
Transcriptome 3' end profiling by high throughput sequencing of HeLa cells depleted of MATR3, PTBP1/2 individually or in combination
RNA-seq of coding RNA
Homo sapiens
20
01/05/2018
-
ENA
62
-
4SU-iCLIP of PTBP1 from HEK293 cells with or without MATR3 depletion
RNA-seq of coding RNA
Homo sapiens
4
01/05/2018
-
ENA
50
-
iCLIP of MATR3 from C57BL/6J wildtype mice
CLIP-seq
Mus musculus
7
01/05/2018
-
ENA
49
-
Transciptome time course of Arabidopsis stigma senescence
RNA-seq of coding RNA
Arabidopsis thaliana
9
01/05/2018
-
ENA
70
-
4SU-iCLIP of MATR3 from HEK293 cells with or without PTBP1 depletion
CLIP-seq
Homo sapiens
3
01/05/2018
-
ENA
51
-
Transcriptome profiling by high throughput sequencing of HeLa cells depleted of MATR3, PTBP1/2 individually or in combination by siRNA
RNA-seq of coding RNA
Homo sapiens
36
01/05/2018
-
ENA
90
-
Transcriptional profiling of tfap2a;tfap2c loss of function in zebrafish single whole embryos at 15 somites post fertilisation
RNA-seq of coding RNA
Danio rerio
360
01/05/2018
ENA
58
-
RNA-seq to investigate host response in resistant versus susceptible breeds of Gallus gallus to Newcastle disease virus challenge in the Harderian gland transcriptome
RNA-seq of coding RNA
Gallus gallus
94
01/05/2018
-
ENA
51
-
Atp4b-Cre;Cdh1(fl/fl);Kras(LSL-G12D/+);Trp53(fl/fl);Rosa26(LSL-YFP/LSL-YFP) mouse stomach vs. Atp4b-Cre;Cdh1(fl/+);Kras(LSL-G12D/+);Trp53(fl/fl);Rosa26(LSL-YFP/LSL-YFP) mouse stomach microarray
transcription profiling by array
Mus musculus
8
01/05/2018
100
-
RNA-seq of mouse adipose stem and progenitor cells
RNA-seq of coding RNA
Mus musculus
10
01/05/2018
ENA
75
-
scRNA-seq of mouse adipose stem and progenitor cells
RNA-seq of coding RNA from single cells
Mus musculus
288
01/05/2018
ENA
66
-
3' RNA-seq of CD142+/- mouse adipose stem and progenitor cells
RNA-seq of coding RNA
Mus musculus
50
01/05/2018
ENA
59
-
3' RNA-seq of CD142+/- human adipose stem and progenitor cells
RNA-seq of coding RNA
Homo sapiens
12
01/05/2018
ENA
49
-
Comparative transcriptome analysis of a lowly virulent strain of Erwinia amylovora in shoots of two apple cultivars susceptible and resistant to fire blight
RNA-seq of coding RNA
Erwinia amylovora
30
01/05/2018
-
ENA
40
-
RNA-seq of barley lines after dehydration, spider mite or combined stress
RNA-seq of coding RNA
Hordeum vulgare subsp. vulgare
12
30/04/2018
-
ENA
49
-
ChIP-seq of IDS1-myc using Oryza sativa seedlings
ChIP-seq
Oryza sativa Japonica Group
4
30/04/2018
ENA
321
-
DNA methylation profiling of BEAS-2B cells exposed to low doses of Ag nanoparticles for 6 weeks
methylation profiling by array
Homo sapiens
6
30/04/2018
-
34
-
RNA-Seq of BEAS-2B cells treated with low doses of Ag nanoparticles for 6 weeks
RNA-seq of coding RNA
Homo sapiens
13
30/04/2018
ENA
39
-
Examination of tumor samples obtained after laparoscopic supracervical hysterectomy and a derivative leiomyosarcoma
comparative genomic hybridization by array
Homo sapiens
10
30/04/2018
-
48
-
Transcriptional response of Pseudomonas aeruginosa PAO1 to NaClO
transcription profiling by array
Pseudomonas aeruginosa PAO1
4
30/04/2018
-
51
-
Identification of transcript dysregulation in rats with a neuropathic pain, treated or not with vitamin D
transcription profiling by array
Rattus norvegicus
6
29/04/2018
-
9
-
RNA-seq of Pseudomonas aeruginosa PAO1 planktonic and biofilm cells treated with coumarin
RNA-seq of coding RNA
Pseudomonas aeruginosa PAO1
12
29/04/2018
-
ENA
62
-
Genetic Engineering of indica Rice with AtDREB1A Gene for enhanced Abiotic Stress Tolerance
transcription profiling by array
Oryza sativa Indica Group
8
29/04/2018
-
54
-
Ultra-deep sequencing of plasma DNA identifies druggable mutations in hepatocellular carcinoma
genotyping by high throughput sequencing
Homo sapiens
40
29/04/2018
-
ENA
65
-
Gene expression profile in human monocytes treated with IgG from APS patients or IgG from controls
transcription profiling by array
Homo sapiens
22
28/04/2018
-
56
-
Identification of cis-eQTLs in six immune cell types CD4, CD8, CD14,CD15, CD19, PLA and ileal, colonic and rectal biopsies in 323 healthy European individuals (CEDAR cohort)
transcription profiling by array
Homo sapiens
2967
28/04/2018
-
122
-
Genotyping of 323 healthy Europeans blood samples (CEDAR cohort) for cis-eQTL analysis in 6 immune cell types and ileal, colonic and rectal biopsies
genotyping by array
Homo sapiens
692
28/04/2018
-
51
-
Transcriptome profiling during interactions between food-spoilage-associated lactic acid bacteria: Leuconostoc gelidum, Lactococcus piscium and Lactobacillus oligofermentans
RNA-seq of coding RNA
Lactobacillus oligofermentans LMG 22743T, Lactobacillus oligofermentans LMG 22743T + Lactococcus piscium MKFS47, Lactobacillus oligofermentans LMG 22743T + Lactococcus piscium MKFS47 + Leuconostoc gelidum subsp. gasicomitatum LMG 18811T, Lactococcus piscium MKFS47, Lactococcus piscium MKFS47 + Leuconostoc gelidum subsp. gasicomitatum LMG 18811T, Leuconostoc gelidum subsp. gasicomitatum LMG 18811T, Leuconostoc gelidum subsp. gasicomitatum LMG 18811T + Lactobacillus oligofermentans LMG 22743T
71
27/04/2018
-
ENA
46
-
RNAseq of old and young Macrotermes bellicosus (Blattodea, Isoptera) individuals
RNA-seq of coding RNA
Macrotermes bellicosus
36
26/04/2018
-
ENA
59
-
Transcription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls
transcription profiling by array
Arabidopsis thaliana
30
26/04/2018
-
63
-
Ampliseq transcriptomic array of REF seq. genes in Snai1 knock out triple negative breast cancer cells
RNA-seq of coding RNA
Homo sapiens
6
25/04/2018
-
ENA
105
-
Ampliseq transcriptomic array of REF seq. genes in ZEB1 knock out triple negative breast cancer cells
RNA-seq of coding RNA
Homo sapiens
6
25/04/2018
-
ENA
75
-
ChIP-sequencing of Snai1 transcription factor in triple negative breast cancer cell line Hs578T
ChIP-seq
Homo sapiens
4
25/04/2018
-
ENA
74
-
ChIP-sequencing of ZEB1 in triple negative breast cancer cell line Hs578T
ChIP-seq
Homo sapiens
4
25/04/2018
-
ENA
78
-
Transcription profiling of human primary bone cells exposed to Staphylococcus aureus
transcription profiling by array
Homo sapiens
6
24/04/2018
-
63
-
Jak kinase inhibition in mouse adipocyte progenitors
transcription profiling by array
Mus musculus
12
24/04/2018
-
40
-
Microarray of ZEB1 Loss-of-Function in NCH421K cells
transcription profiling by array
Homo sapiens
6
24/04/2018
61
-
ChIP-seq for Zeb1 in Human Neural Stem Cells and Glioblastoma Cancer Stem-like Cells
ChIP-seq
Homo sapiens
2
24/04/2018
ENA
67
-
Transcription profiling by array to investigate gene expression changes caused by TNF-alpha induced fusion of human M13SV1-Cre breast epithelial cells and MDA-MB-435-pFDR1 breast cancer cells during normoxia and hypoxia
transcription profiling by array
Homo sapiens
8
23/04/2018
-
65
-
Transcriptional Profiling of Synovium in a Porcine Model of Early Post-traumatic Osteoarthritis
RNA-seq of coding RNA
Sus scrofa
42
21/04/2018
-
ENA
69
-
Biochemical Efficacy and Safety Trial of Vitamin D: dose-finding, placebo-controlled, randomised clinical trial assessing effects of high dose vitamin D
transcription profiling by array
Homo sapiens
574
21/04/2018
58
-
RNA sequencing of chicken limb distal mesenchyme cells to compare gene expression over time and in heterochronic grafted cells
RNA-seq of coding RNA
Gallus gallus
12
20/04/2018
ENA
66
-
Single cell RNA-seq of isolated human foetal L/M-opsin cone photoreceptor populations labelled using the AAV2/9.pR2.1.GFP reporter
RNA-seq of coding RNA from single cells
Homo sapiens
295
20/04/2018
-
ENA
111
-
RNA-seq of isolated human foetal and hiPSC L/M-opsin cone photoreceptor populations labelled using the AAV2/9.pR2.1.GFP reporter
RNA-seq of coding RNA
Homo sapiens
95
20/04/2018
-
ENA
104
-
Morphine treatment leads to temporal modulation of the gut microbiome
DNA-seq
mouse gut metagenome
64
16/04/2018
-
ENA
79
-
Morphine treatment induces distinct changes in the gut microbiome at day 3 post treatment
DNA-seq
mouse gut metagenome
16
16/04/2018
-
ENA
58
-
Microarray analysis of human pediatric omental biopsies obtained from uremic patients, patients on peritoneal dialysis or healthy controls
transcription profiling by array
Homo sapiens
19
12/04/2018
-
114
-
Genome-wide profiling of H3K27ac (ChIP-seq) in IMR90 cells
ChIP-seq
Homo sapiens
4
12/04/2018
ENA
80
-
Genome-wide profiling of CTCF binding (ChIP-seq) in A549 and U2OS cells
ChIP-seq
Homo sapiens
4
12/04/2018
ENA
81
-
Circularized chromosome conformation capture (4C-seq) in A549 and U2OS cells stably expressing rat GR
4C
Homo sapiens
4
12/04/2018
ENA
72
-
RNA Sequencing of Adamantinomatous Craniopharyngioma
RNA-seq of coding RNA
Homo sapiens
24
11/04/2018
ENA
130
-
Laser Capture Microdissection and RNA Sequencing Human Adamantinomatous Craniopharyngioma
RNA-seq of coding RNA
Homo sapiens
8
11/04/2018
ENA
103
-
IL-17A treatment of mouse primary colonic epithelial spheroids in 3 differentiation states
transcription profiling by array
Mus musculus
24
10/04/2018
-
71
-
Rat-CHTP1.2-Experiment
transcription profiling by array
Rattus norvegicus
79
10/04/2018
58
-
Systems toxicology assessment of CHTP1.2 [Lung Data]
transcription profiling by array
Rattus norvegicus
70
10/04/2018
56
-
Systems toxicology assessment of CHTP1.2 [Liver Data]
transcription profiling by array
Rattus norvegicus
83
10/04/2018
49
-
Changes in nitrogen availability lead to a reprogramming of pyruvate metabolism
transcription profiling by array
Hordeum vulgare
15
09/04/2018
22
-
RNA-seq of Streptomyces coelicolor and Streptomyces davawensis including a dodecin gene deletion variant in response to plumbagin treatment
RNA-seq of coding RNA
Streptomyces coelicolor A3(2), Streptomyces davaonensis JCM 4913
12
07/04/2018
-
ENA
65
-
ATAC-seq of oesophageal adenocarcinoma cell line MFD-1
ATAC-seq
Homo sapiens
2
06/04/2018
-
ENA
42
-
RNA-seq to investigate how human-specific Notch2 paralogs expand cortical neurogenesis through regulation of Delta/Notch interactions
RNA-seq of coding RNA
Homo sapiens
11
06/04/2018
EGA
99
-
Transcription profiling by array of mouse primary hepatocytes from wild type and Xpa-/-p53+/- strains treated with carcinogens
transcription profiling by array
Mus musculus
114
06/04/2018
139
-
Transcriptome analysis of Huntington disease and control cerebral organoids at day 45 and 105 of differentiation
transcription profiling by array
Homo sapiens
15
05/04/2018
-
101
-
Single-molecule sequencing of maize and sorghum developmental tissues
RNA-seq of coding RNA
Sorghum bicolor, Zea mays
16
05/04/2018
-
ENA
96
-
RNA-sequencing of Sorghum tissues at different developmental stages (comparative transcriptome study)
RNA-seq of coding RNA
Sorghum bicolor
165
05/04/2018
-
ENA
109
-
RNA-sequencing of maize tissues at different developmental stages (comparative transcriptome study)
RNA-seq of coding RNA
Zea mays
36
05/04/2018
-
ENA
69
-
Microarrays of SK-N-AS cells at 37 and 40 degrees C treated with TNFalpha
transcription profiling by array
Homo sapiens
48
05/04/2018
109
-
Whole transcriptome assay of human urinary bladder cancer tumor samples from the central part and invasive front of individual tumors
transcription profiling by array
Homo sapiens
16
04/04/2018
-
140
-
Transcription profiling by microarray of A549 cells and Ext1 knock out or wild type mouse embryonic fibroblast cells co-cultured as spheroids
transcription profiling by array
Homo sapiens
12
04/04/2018
-
77
-
A reversible light and genotype dependent acquired thermolerance response protects the potato plant from excessive temperature (microarray data set 2)
transcription profiling by array
Solanum tuberosum
12
04/04/2018
-
44
-
A reversible light and genotype dependent acquired thermolerance response protects the potato plant from excessive temperature
transcription profiling by array
Solanum tuberosum
24
04/04/2018
-
41
-
RNA-seq of PCGF5 knockout and PCGF3/5 double knockout mouse embryonics stem cells bearing doxycycline-inducible Xist transgene on chromosome 16
RNA-seq of coding RNA
Mus musculus
16
04/04/2018
-
63
-
RNA-seq of PBMCs to investigate peptide vaccine immunotherapy biomarkers and response patterns in pediatric gliomas
RNA-seq of coding RNA
Homo sapiens
54
03/04/2018
-
ENA
136
-
Impaired spermatogenesis, muscle and erythrocyte function in U12 intron splicing-defective Zrsr1 mutant mice
RNA-seq of coding RNA
Mus musculus
18
03/04/2018
-
ENA
149
-
Microarray transcriptional analysis of leptin signaling knockdown and rescue in 72-hour post fertilization zebrafish
transcription profiling by array
Danio rerio
16
02/04/2018
78
-
Genomic copy number changes in breast cancers from patients exposed to ioinising radiation and non-exposed controls
comparative genomic hybridization by array
Homo sapiens
136
02/04/2018
-
81
-
Requirement for the Mediator kinase module for activation of super-enhancer associated genes in colon cancer cells
RNA-seq of coding RNA
Homo sapiens
24
02/04/2018
ENA
103
-
Compatible and incompatible infection of potato by nematode Globodera rostochiensis
RNA-seq of coding RNA
Solanum tuberosum
24
02/04/2018
-
ENA
100
-
Transcriptional profiling of pancreatic beta cells during maturation and with function-inactivating mutations
RNA-seq of coding RNA
Mus musculus
3
01/04/2018
-
ENA
56
-
3-D nasal cultures: Systems toxicological assessment of a candidate modified-risk tobacco product (nasal epithelial cells-microRNA dataset)
transcription profiling by array
Homo sapiens
362
01/04/2018
52
-
Single-cell RNA-seq analysis of cutaneous wound healing in mouse
RNA-seq of coding RNA from single cells
Mus musculus
2534
01/04/2018
ENA
75
-
Systematic interaction profiling of human bromodomain-containing proteins reveals complex modes of binder recruitment for BET proteins
ChIP-seq
Homo sapiens
6
01/04/2018
ENA
65
-
Deciphering the transcriptional adaptation of Corynebacterium glutamicum in transition from aerobiosis via microaerobiosis to anaerobiosis via RNA-seq
RNA-seq of coding RNA
Corynebacterium glutamicum ATCC 13032
6
31/03/2018
-
ENA
41
-
Illumina HumanmethylationEPIC array analysis in early synovial fibroblasts of RA patients before diagnosis
methylation profiling by array
Homo sapiens
10
31/03/2018
-
52
-
Illumina Humanmethylation450k array analysis in early synovial fibroblasts of RA patients before diagnosis
methylation profiling by array
Homo sapiens
10
31/03/2018
-
39
-
RNAseq analysis of colon and ileum tissue from naive wild type, MR1-/- and IL-17A-/- mice
RNA-seq of coding RNA
Mus musculus
24
31/03/2018
ENA
62
-
RNA-Seq analysis of MCV-miR-M1 mimic-transfected HEK293 cells
RNA-seq of coding RNA
Homo sapiens
9
31/03/2018
-
ENA
55
-
Alterations in the gene expression pattern of the pituitary is consistent with the domesticated phenotype in chickens
transcription profiling by array
Gallus gallus
24
31/03/2018
-
45
-
RNA-seq of Heliconius melpomene adult male and female heads (eye+brain), antennae, mouthparts (labial palps+proboscis) and legs
RNA-seq of coding RNA
Heliconius melpomene
10
31/03/2018
-
ENA
40
-
RNA-seq of whole female drosophila wounded and/or infected with Pseudomonas entomophila
RNA-seq of coding RNA
Drosophila melanogaster
22
31/03/2018
-
ENA
48
-
p62/SQSTM1 iCLIP in Human Huh-7 cells
RNA-seq of coding RNA
Homo sapiens
10
31/03/2018
-
ENA
49
-
Whole exome sequencing of mouse ovarian cancer cell line ID8
genotyping by high throughput sequencing
Mus musculus
1
31/03/2018
ENA
267
-
Differentially expressed genes in KPC Cxcr2 KO vs KPC mouse PDAC
RNA-seq of coding RNA
Mus musculus
10
31/03/2018
ENA
264
-
microRNA profiling by array of activated or apoptotic (UV-B treated) T-lymphocytes and corresponding released microvesicles derived from normal healthy donors and systemic lupus erythematosus (SLE) patients
microRNA profiling by array
Homo sapiens
8
31/03/2018
71
-
Role of mevalonate pathway intermediates in anticancer effect of statins
transcription profiling by array
Homo sapiens
20
31/03/2018
45
-
RNA-seq of from Drosophila melanogaster tissues: gut; fatbody; brain; ovary or thorax, fed different diets or diet supplemented with rapamycin
RNA-seq of coding RNA
Drosophila melanogaster
44
30/03/2018
-
ENA
95
-
Pancreatic tissue of 9 week old mice with genotypes Ptf1a-Cre;LSL-KrasG12D and Ptf1a-Cre;LSL-KrasG12D;Ptpn11fl/fl
transcription profiling by array
Mus musculus
6
30/03/2018
62
-
RNA-seq of pericarp of purple-grain wheat Luozhen No.1 of 20 days (D20) shading treatment after pollination, against 20 DAP untreated controls
RNA-seq of coding RNA
Triticum aestivum
2
30/03/2018
ENA
70
-
RNA-seq of transplanted pluripotent stem cells-derived human intestinal organoids upon mechanical lengthening and human jejunum tissues
RNA-seq of coding RNA
Homo sapiens
11
30/03/2018
ENA
48
-
Metabolic maturation during muscle stem cell differentiation is achieved by miR-1/133a-mediated inhibition of the Dlk-Dio3 mega gene cluster
transcription profiling by array
Mus musculus
13
30/03/2018
-
39
-
Transcription profiling by microarray of isolated murine satellite cell differentiation in vitro
transcription profiling by array
Mus musculus
3
30/03/2018
-
51
-
A multi-omics approach to decipher the complexity of drug resistance in diffuse large B-cell lymphoma
RNA-seq of coding RNA
Homo sapiens
17
29/03/2018
-
ENA
55
-
RNA-seq of the diatom Skeletonema marinoi grown in the presence or absence of the copepod Calanus finmarchicus
RNA-seq of coding RNA
Skeletonema marinoi
12
29/03/2018
-
ENA
47
-
Transcriptional analysis using E13.5 mouse eyes of TGFb2/GDNF mutants compared to WT
transcription profiling by array
Mus musculus
6
29/03/2018
-
43
-
Gene array of human mammary epithelial cell HMEC transfected with miR-106a-3p mimic against transfected control mimic
transcription profiling by array
Homo sapiens
6
28/03/2018
-
44
-
Whole genome microarray of bendiocarb-resistant An. gambiae mosquitoes from Uganda
transcription profiling by array
Anopheles gambiae S
40
28/03/2018
-
40
-
Transcription profiling by array of resting memory OT-I T_CXCR4 or OT-I T_Control cells isolated from the spleen 90 days following DC vaccination
transcription profiling by array
Mus musculus
6
28/03/2018
30
-
Peripheral tissue instruction is the primary determinant of CD8+ T cell pathogenicity: transcription profiling by RNA-seq of CD8+ effector T cells isolated from the blood and skin of HSCT patients developing acute pattern GVHD
RNA-seq of coding RNA
Homo sapiens
15
28/03/2018
ENA
72
-
Peripheral tissue instruction is the primary determinant of CD8+ T cell pathogenicity: transcription profiling by array of donor CD8+ effector T cells isolated from the secondary lymphoid organs, blood and GVHD-target organs at D+7 post-transplant (FTY720)
transcription profiling by array
Mus musculus
9
28/03/2018
32
-
Peripheral tissue instruction is the primary determinant of CD8+ T cell pathogenicity: transcription profiling by array of donor CD8+ effector T cells isolated from the secondary lymphoid organs, blood and GVHD-target organs at D+6 post-transplant (F>M model)
transcription profiling by array
Mus musculus
48
28/03/2018
33
-
RNA-seq of pericarp of Triticum aestivum Luozhen No.1, field study in Tai’an (China) at 15 and 20 days post pollination in response to shading treatment after pollination compared to untreated controls
RNA-seq of coding RNA
Triticum aestivum
8
26/03/2018
ENA
74
-
Small RNA-seq of quiescent, activated of differentiated mouse skeletal muscle stem cells
microRNA profiling by high throughput sequencing
Mus musculus
7
24/03/2018
-
ENA
74
-
RNAseq of peripheral blood mononuclear cells from related Hyperimmunoglobinemia D patients presenting with different phenotypes
RNA-seq of coding RNA
Homo sapiens
16
23/03/2018
-
ENA
66
-
Transcriptional response of Arabidopsis thaliana to exogenous application of pipecolic acid
RNA-seq of coding RNA
Arabidopsis thaliana
20
23/03/2018
-
ENA
48
-
A microarray meta-dataset of non-small cell lung cancer
transcription profiling by array
Homo sapiens
1118
23/03/2018
-
283
-
Targeting NAT10 enhances healthspan and lifespan in a mouse model of human accelerated aging syndrome
RNA-seq of coding RNA
Mus musculus
12
22/03/2018
-
ENA
80
-
Dam-specific RNA-seq
RNA-seq of coding RNA
Mycoplasma pneumoniae
5
22/03/2018
-
ENA
43
-
Affymetrix gene expression array (mouse 2.0) of sorted undifferentiated spermatogonia in inducible Miwi2 knock-out model
transcription profiling by array
Mus musculus
8
21/03/2018
-
62
-
Targeted sequencing of 49 primary medulloblastoma samples using Illumina TruSight Tumor 15 assay
DNA-seq
Homo sapiens
49
20/03/2018
-
ENA
127
-
Transcriptome-wide mapping of signaling pathways and early immune responses in lumpfish leukocytes upon in vitro bacterial exposure
RNA-seq of coding RNA
Cyclopterus lumpus
13
20/03/2018
ENA
81
-
Transcriptional profiling of E. coli K-12 and E. coli O157 (Sakai) following heat shock at 45 degree celsius
transcription profiling by array
Escherichia coli
6
20/03/2018
43
-
Genome-Wide Translation Profiling by Ribosome-Bound tRNA Capture
RNA-seq of non coding RNA
Saccharomyces cerevisiae
244
19/03/2018
-
ENA
149
-
ChIp-seq of HeLa cells with anti-glucocorticoid (GR) antibodies
ChIP-seq
Homo sapiens
8
19/03/2018
ENA
77
-
Microglia have a more extensive and divergent response to interferon-alpha compared with astrocytes
transcription profiling by array
Mus musculus
8
18/03/2018
44
-
DNA sequencing of Arabidopsis thaliana nrpd1-3 background with novel insertions of LTR retrotransposon ONSEN/COPIA78
DNA-seq
Arabidopsis thaliana
11
18/03/2018
-
ENA
45
-
DNA sequencing of Arabidopsis thaliana wild-type and nrpd1-3 under control or heat stress
DNA-seq
Arabidopsis thaliana
4
18/03/2018
-
ENA
45
-
Saccharomyces cerevisiae transcriptome analysis of conditional yjr141w-psd mutant compared to control strain
transcription profiling by array
Saccharomyces cerevisiae
12
18/03/2018
-
51
Identifying crossover locations in Arabidopsis thaliana wild-type Col x Ler F2 populations using genotyping by sequencing
genotyping by high throughput sequencing
Arabidopsis thaliana
74
17/03/2018
-
ENA
35
-
RNA seq of fluid shear stress treated mouse renal epithelial cells
RNA-seq of coding RNA
Mus musculus
8
15/03/2018
ENA
47
-
Exomes of human leukemic JMML (Juvenile MyeloMonocytic Leukemia) xenografts in NSG or NSG-S mice (samples enriched in hCD45)
genotyping by high throughput sequencing
Homo sapiens, Mus musculus
26
15/03/2018
-
ENA
51
-
Role of mTOR signaling in mesenchamyl tissue response to inflammation in rheumatoid arthritis
transcription profiling by array
Homo sapiens
20
15/03/2018
-
75
-
Transcription profiling by array of liver from patients with varying stages of non-alcoholic fatty liver disease
transcription profiling by array
Homo sapiens
88
15/03/2018
192
-
RNAseq study (root and shoot) of Holcus lanatus ecotypes selected from two widely contrasting habitats, acid bog (pH 3.5) or limestone quarry spoil (pH 7.5)
RNA-seq of coding RNA
Holcus lanatus
39
15/03/2018
-
ENA
87
-
Agilent CGH + SNP array in 7 tumoral samples of Juvenile Myelomonocytic Leukemia (JMML)
comparative genomic hybridization by array
Homo sapiens
7
14/03/2018
-
47
-
Exomes of human leukemic JMML (Juvenile MyeloMonocytic Leukemia) cells and paired fibroblasts (germline controls) when available
genotyping by high throughput sequencing
Homo sapiens
28
14/03/2018
-
ENA
52
-
RNA-seq of sciatic nerve from mice expressing the transcription factor Miz1 with deletion of the POZ domain
RNA-seq of coding RNA
Mus musculus
8
14/03/2018
-
ENA
51
Neochloris oleoabundans under salt and nitrogen stress
RNA-seq of coding RNA
Neochloris oleoabundans
8
14/03/2018
-
ENA
55
-
Microarray analysis of eyes only from 23-hpf wild-type and pitx2M64* homozygous mutant zebrafish embryos
transcription profiling by array
Danio rerio
6
13/03/2018
-
35
-
Diurnal gene expression in Populus tremula x P. tremuloides wild type and lhy RNAi line 10
transcription profiling by array
Populus tremula x Populus tremuloides
26
13/03/2018
104
-
Whole-Genome Gene Expression Bead Array analysis of Toll-like receptor 2/8 stimulated human monocytes
transcription profiling by array
Homo sapiens
72
09/03/2018
-
35
-
Defective germline reprogramming rewires the spermatogonial transcriptome
Bisulfite-seq
Mus musculus
3
09/03/2018
ENA
37
-
Comparison of the Biological Effects of Long-Term Treatment of Human Bronchial Epithelial Cells with 3R4F Cigarette Smoke or THS2.2 Aerosol Total Particulate Matter (microRNA data)
transcription profiling by array
Homo sapiens
80
08/03/2018
48
-
Transcription profiling by array to investigate the pattern of gene expression of B cells derived from Galectin-3 knockout mice
transcription profiling by array
Mus musculus
12
08/03/2018
-
68
-
Comparison of the Biological Effects of Long-Term Treatment of Human Bronchial Epithelial Cells with 3R4F Cigarette Smoke or THS2.2 Aerosol Total Particulate Matter (mRNA data)
transcription profiling by array
Homo sapiens
75
08/03/2018
63
-
Assessment of the impact of aerosol from a potential modified risk tobacco product compared with cigarette smoke on human organotypic oral epithelial cultures under different exposure regimens (buccal epithelial cells-microRNA dataset)
transcription profiling by array
Homo sapiens
262
07/03/2018
24
-
Assessment of the impact of aerosol from a potential modified risk tobacco product compared with cigarette smoke on human organotypic oral epithelial cultures under different exposure regimens (buccal epithelial cells-mRNA dataset)
transcription profiling by array
Homo sapiens
251
07/03/2018
39
-
Assessment of the impact of aerosol from a potential modified risk tobacco product compared with cigarette smoke on human organotypic oral epithelial cultures under different exposure regimens (gingival epithelial cells-microRNA dataset)
transcription profiling by array
Homo sapiens
192
07/03/2018
24
-
Assessment of the impact of aerosol from a potential modified risk tobacco product compared with cigarette smoke on human organotypic oral epithelial cultures under different exposure regimens (gingival epithelial cells-mRNA dataset)
transcription profiling by array
Homo sapiens
188
07/03/2018
23
-
CAGE on Drosophila mesodermal embryo samples
RNA-seq of coding RNA
Drosophila melanogaster
4
07/03/2018
-
ENA
22
-
Transcriptome analysis of budding yeast strains manipulated in RPL22A and RPL22B genes
RNA-seq of coding RNA
Saccharomyces cerevisiae
16
07/03/2018
-
ENA
35
-
Microarray analysis of 7 week control and nwasp knockout mouse backskin
transcription profiling by array
Mus musculus
2
06/03/2018
-
28
-
ChIP-Seq analysis of CCCTC-binding factor (CTCF) binding in rodents
ChIP-seq
Mus caroli, Mus musculus domesticus, Mus pahari
12
06/03/2018
ENA
32
-
RNA-seq analysis of Mus caroli and Mus pahari
RNA-seq of coding RNA
Mus caroli, Mus pahari
12
06/03/2018
-
ENA
28
-
Determination of effects of propionate on gene expression in human cerebromicrovascular endothelial cell line hCMEC/D3
transcription profiling by array
Homo sapiens
6
05/03/2018
-
67
-
Analyses of transcriptome sequences reveal multiple ancient large-scale duplication events in the ancestor of Sphagnopsida (Bryophyta)
RNA-seq of coding RNA
Eosphagnum inretortum, Flatbergium novo-caledoniae, Flatbergium sericeum, Sphagnum cribrosum
4
05/03/2018
-
ENA
23
-
RNA-seq data from the pilot study of the 'Personal Genome Project UK': PGP-UK10
RNA-seq of coding RNA
Homo sapiens
20
04/03/2018
ENA
93
-
Methylation arrays elucidate 5mC and 5hmC levels of human glioblastoma cell line LN229 upon restoration of TET3 expression
methylation profiling by array
Homo sapiens
8
03/03/2018
52
-
Analysis of the dose-dependent response of the ribosome-targeting antibiotic lincomycin on gene expression and its relationship to growth and secondary metabolism of S. coelicolor A3(2)
RNA-seq of coding RNA
Streptomyces coelicolor A3(2)
2
02/03/2018
-
ENA
35
-
Contribution of the Hog1 SAPK to nitrosative stress response in Candida albicans
RNA-seq of coding RNA
Candida albicans
24
02/03/2018
ENA
46
-
Systems Toxicology Assessment of the Biological Impact of a Candidate Modified Risk Tobacco Product on Human Organotypic Oral Epithelial Cultures (miRNA dataset)
transcription profiling by array
Homo sapiens
331
01/03/2018
61
-
Short Tandem Repeats - Targeted-Sequencing of human cells for Lineage tracing
genotyping by high throughput sequencing
Homo sapiens
210
01/03/2018
-
ENA
74
-
Genome-wide binding sites of NF90/ILF3 in K562 erythroleukemia cells
ChIP-seq
Homo sapiens
1
01/03/2018
ENA
53
-
Autoantibody profiling of sera from individuals with Systemic Lupus Erythematosus (SLE) by protein microarray
proteomic profiling by array
Homo sapiens
649
01/03/2018
-
102
-
Microarray transcriptional profiling of three-spined stickleback (Gasterosteus aculeatus) exposed to 10 different model toxicants and 26 mixtures of these toxicants
transcription profiling by array
Gasterosteus aculeatus
522
01/03/2018
-
48
-
Genome-wide copy number alteration analysis to identify genetic signature for development of distant metastases in Papillary Thyroid Cancer
comparative genomic hybridization by array
Homo sapiens
204
01/03/2018
-
69
-
RNAi knock down using siRNAs targeting PROX1 or §-catenin in human colon carcinoma cells
transcription profiling by tiling array
Homo sapiens 48 hours
10
01/03/2018
63
-
Microarray analysis of human umbilical vein endothelial cells (HUVECs) chronically irradiated with low dose-rate of ionizing radiation for one, three and six weeks
transcription profiling by array
Homo sapiens
27
28/02/2018
-
70
-
Transcriptomic analysis of F. graminearum disease response in near-isogenic resistant and susceptible hexaploid wheat lines
RNA-seq of coding RNA
Triticum aestivum
22
28/02/2018
-
ENA
87
-
RNA-Seq of Heliconius melpomene heads
RNA-seq of coding RNA
Heliconius melpomene
4
28/02/2018
-
ENA
42
-
microRNA profile of bovine monocyte-derived macrophages infected in vitro with Streptococcus agalactiae
RNA-seq of non coding RNA
Bos taurus
20
28/02/2018
-
ENA
55
-
Transcription profiling by array of osteoarthritic bone marrow lesions compared to normal bone
transcription profiling by array
Homo sapiens
24
28/02/2018
-
137
Gene expression profiling of 48 primary medulloblastoma samples
transcription profiling by array
Homo sapiens
48
27/02/2018
-
92
-
Genotyping by array of 123 IDH WT glioblastomas
genotyping by array
Homo sapiens
123
27/02/2018
-
75
-
Transcriptional profiling of primary human alveolar macrophages challenged with Streptococcus pneumoniae from patients with chronic obstructive pulmonary disease compared to healthy donors
transcription profiling by array
Homo sapiens
12
26/02/2018
147
-
Role of Fnr1 and Fnr3 in transcriptional regulation under oxygen limitation in Herbaspirillum seropedicae
ChIP-seq
Herbaspirillum seropedicae
4
26/02/2018
ENA
50
-
Transcriptional analysis of primary human monocyte-derived dendritic cells (moDCs) infected with different Zika virus strains and YF17D virus
transcription profiling by array
Homo sapiens
15
26/02/2018
-
68
-
RNA-Seq transcriptional analysis of Herbaspirillum seropedicae fnr1 and fnr3 deletion mutants in comparison with the wild type under two different oxygen regimes
RNA-seq of coding RNA
Herbaspirillum seropedicae
12
26/02/2018
ENA
63
-
Transcriptional profiling of 5T33MM cells treated in vivo with quisinostat, decitabine or the combination
transcription profiling by array
Mus musculus
16
26/02/2018
344
RNA-seq of Primary Human Hepatocytes (PHH) exposed to Valproic Acid (VPA) for 3 days daily and 3 days daily exposure followed by 3 days washout
RNA-seq of coding RNA
Homo sapiens
24
23/02/2018
-
ENA
146
MeDIP profiling by high-throughput sequencing of Primary Human Hepatocytes (PHH) exposed to Valproic Acid (VPA) for 3 days daily and 3 days daily exposure followed by 3 days washout
MeDIP-seq
Homo sapiens
16
23/02/2018
-
ENA
76
-
iCLIP of the RNA-binding protein ARPP21
CLIP-seq
Homo sapiens
4
23/02/2018
ENA
83
-
RNA-seq of leaf, root, and stem xylem from Western poplar (Populus trichocarpa) plants in response to drought, high salinity, heat and cold stress
RNA-seq of coding RNA
Populus trichocarpa
81
23/02/2018
-
ENA
162
Kinetics of L cells transcriptional profiling over the course of colonization in germ-free mice
transcription profiling by array
Mus musculus
17
22/02/2018
-
48
-
PRO-cap in Drosophila melanogaster embryo at 3-4h and 6-8h after egg laying
RNA-seq of coding RNA
Drosophila melanogaster
4
22/02/2018
-
ENA
53
-
Autoinflammation with enhanced type I interferon signaling due to DNASE2 mutations
RNA-seq of coding RNA
Homo sapiens
13
22/02/2018
-
ENA
126
-
L cells transcriptional profiling from germ-free and conventional mice
transcription profiling by array
Mus musculus
24
21/02/2018
-
77
-
RNA-seq of enriched barley stomatal complexes versus total leaves
RNA-seq of coding RNA
Hordeum vulgare
3
21/02/2018
-
ENA
61
-
Gene expression profiling of peripheral blood mononuclear cells (PBMCs) 8 hours after exposure to 1 Gy of carbon or iron ions
transcription profiling by array
Homo sapiens
16
21/02/2018
-
101
Senataxin resolves R-loops forming at DNA double strand breaks to prevent translocations
ChIP-seq, RNA-seq of coding RNA
Homo sapiens
7
20/02/2018
-
ENA
95
-
RNA-seq of Nostoc sp. PCC 7120 (Anabaena sp. PCC 7120) wild-type strain, hetZ mutant and hetP mutant
RNA-seq of coding RNA
Nostoc sp. PCC 7120
6
19/02/2018
ENA
67
-
Transcription profiling of newly generated and mature mouse splenic plasma cells after immunization with sheep red blood cells
transcription profiling by array
Mus musculus
7
19/02/2018
-
43
-
Transcription profiling by RNA-seq of murine colon tumours after in situ depletion of Nuak1
RNA-seq of coding RNA
Mus musculus
12
19/02/2018
-
ENA
59
-
Comparison of the transcriptomic impact of NRF2 depletion with that of NUAK1 depletion in SW480 colorectal cancer cells
RNA-seq of coding RNA
Homo sapiens
12
19/02/2018
-
ENA
75
-
Meythlation profiling by array to investigate the effect of hyperoxia on DNA methylation in mouse lung tissue
methylation profiling by array
Mus musculus
24
17/02/2018
-
71
-
RNA-seq of total lymph node cells from inducible ll7 gene deletion mice
RNA-seq of coding RNA
Mus musculus
6
16/02/2018
ENA
103
-
DNA Methylation analysis of human tissues from obese patients
methylation profiling by array
Homo sapiens
204
15/02/2018
-
116
-
Expression profiling of human tissues from obese patients
transcription profiling by array
Homo sapiens
65
15/02/2018
-
173
-
RNA-Seq of four types of mouse immune samples including those of the spleen (SP), bone marrow (BM), lymph node (LN), and peripheral blood mononuclear cell (PBMC)
RNA-seq of coding RNA
Mus musculus
12
12/02/2018
-
ENA
97
-
Microarray profiling of YTHDF2 deficient mouse oocytes
transcription profiling by array
Mus musculus
10
12/02/2018
-
51
-
Sequence Requirements for Cascade Function in a Type I-E CRISPR System: RNA-Seq
RNA-seq of coding RNA
Escherichia coli str. K-12 substr. MG1655
4
10/02/2018
-
ENA
76
-
Gene expression comparison of MCF10A cells with and without extra centrosomes through overexpression of PLK4
transcription profiling by array
Homo sapiens
12
10/02/2018
-
495
-
Organotypic human bronchial epithelial cultures (MucilAir) exposed to mainstream aerosols from the 3R4F cigarette and a novel tobacco vapor product
transcription profiling by array
Homo sapiens
27
09/02/2018
-
89
-
MicroRNA profiling by array of oral squamous cell cancer (OSCC) surgical margins defined by narrow band imaging
microRNA profiling by array
Homo sapiens
44
09/02/2018
87
-
Draft genome sequencing of Lactuca. sativa cv. Tizian
DNA-seq
Lactuca sativa
4
09/02/2018
-
ENA
60
-
Stabilized biological production by product addiction
DNA-seq
Escherichia coli K-12
24
09/02/2018
-
ENA
91
-
RNA-seq as a global measure of the similarity between human pluripotent stem cell and fetal liver derived B cell hierarchies
RNA-seq of coding RNA
Homo sapiens
47
08/02/2018
ENA
132
-
microRNAs as predictive biomarkers of response to sunitinib or pazopanib in patients with metastatic renal cell carcinoma
microRNA profiling by array
Homo sapiens
60
08/02/2018
-
100
-
RNA-seq of Plasmodium falciparum for comparative analysis of clinical isolates with severe and uncomplicated malaria
RNA-seq of coding RNA
Plasmodium falciparum
44
08/02/2018
-
ENA
70
-
Bulk RNA Barcoding and sequencing (BRB-seq) protocol for RNA-seq of human pre-adipocytes and differentiated adipocytes
RNA-seq of coding RNA
Homo sapiens
34
06/02/2018
-
ENA
93
-
Transcriptome analysis of interactions of genes, mtap1 and sgl1, involved in compound inflorescence development in Medicago truncatula
transcription profiling by array
Medicago truncatula
12
06/02/2018
-
51
-
RNA-seq of Pseudomonas aeruginosa PAO1 wild-type and ersA (sRNA) knock-out mutant
RNA-seq of coding RNA
Pseudomonas aeruginosa PAO1
4
05/02/2018
-
ENA
71
-
Gene expression profiling across ontogenetic stages in wood white (Leptidea sinapis) reveals pathways linked to butterfly diapause regulation
RNA-seq of coding RNA
Leptidea sinapis
60
02/02/2018
-
ENA
106
-
Next generation sequencing for patients with hypomyelinating leukodystrophies
genotyping by high throughput sequencing
Homo sapiens
7
02/02/2018
-
ENA
85
-
Genome-wide profiling reveals cancer-related genes have switched alternative polyadenylation sites in colorectal cancer
RNA-seq of coding RNA
Homo sapiens
6
02/02/2018
-
ENA
143
-
RNA-seq time course of cardiac repair in mouse in response to LAD ligation compared to sham and non-injured controls
RNA-seq of coding RNA
Mus musculus
78
02/02/2018
-
ENA
98
-
Gene expression changes between primary mesothelioma tumour cells and commercially available cell lines, compared to normal primary mesothelial cells
transcription profiling by array
Homo sapiens
38
01/02/2018
-
112
-
RNA-seq analysis of the overexpression of the Fil1 transcription factor in S. pombe
RNA-seq of coding RNA
Schizosaccharomyces pombe
12
01/02/2018
-
ENA
88
-
Next generation sequencing for patients with hypomyelinating leukodystrophies
genotyping by high throughput sequencing
Homo sapiens
15
01/02/2018
-
ENA
93
-
Ribosome profiling and parallel RNA-seq of S. pombe cells subject to amino acid starvation
RNA-seq of coding RNA
Schizosaccharomyces pombe
37
01/02/2018
-
ENA
75
-
RNAseq of human epithelial lung carcinoma cell line A549 exposed to ceria, silver or zinc ions, micron-sized particles or nanoparticles
RNA-seq of coding RNA
Homo sapiens
152
01/02/2018
-
ENA
128
-
Phenotypic analysis of the fil1 transcription factor from S. pombe
RNA-seq of coding RNA
Schizosaccharomyces pombe
16
01/02/2018
-
ENA
92
-
ChIP-seq analysis of the Fil1 transcription factor from S. pombe
ChIP-seq
Schizosaccharomyces pombe
6
01/02/2018
-
ENA
171
-
RNA-seq of SOX2 positive pituitary cells with and without activation of beta-catenin
RNA-seq of coding RNA
Mus musculus
6
01/02/2018
-
ENA
78
-
RNA-seq of ovarian cancer ascites cells
RNA-seq of coding RNA
Homo sapiens
24
01/02/2018
-
ENA
407
-
Transcriptome analysis of WT and gp91-/- mice infected with Salmonella enteric server Typhimurium
transcription profiling by array
Mus musculus
38
01/02/2018
-
55
-
Single-cell RNA-seq of motor neuron progenitors differentiated from mouse embryonic stem cell line HM1 by treatment with RA and SAG
RNA-seq of coding RNA from single cells
Mus musculus
202
01/02/2018
-
ENA
156
-
Transcription profiling by array of murine Ba/F3-ITD cells treated with DMSO or sorafenib
transcription profiling by array
Mus musculus
12
01/02/2018
-
95
Transcription profiling by array of wild type and Hek2 deletion mutants of S. cerevisiae to investigate a SUMO dependent feedback loop which senses and controls nuclear pore subunit biogenesis
transcription profiling by array
Saccharomyces cerevisiae
2
31/01/2018
-
71
-
RNA-Seq of canine transmissible venereal tumors (CTVT)
RNA-seq of coding RNA
Canis lupus familiaris
12
31/01/2018
-
ENA
114
-
Systemic gene expression profiles in patients with ventilator-associated pneumonia
transcription profiling by array
Homo sapiens
56
31/01/2018
109
-
Methylome of 9 canine transmissible veneral tumour (CTVT) samples
MeDIP-seq
Canis lupus familiaris
9
31/01/2018
-
ENA
72
-
RNA-Seq of canine transmissible venereal tumors
RNA-seq of coding RNA
Canis lupus familiaris
6
31/01/2018
-
ENA
101
-
Transcription profiling of Arabidopsis VCS-amiRNA plants under a dehydration stress condition
transcription profiling by array
Arabidopsis thaliana
4
31/01/2018
-
62
-
Transcription profiling of Arabidopsis wild-type plants under a dehydration condition
transcription profiling by array
Arabidopsis thaliana
4
31/01/2018
-
170
-
RNA-seq analysis of mouse (C57/B6) small intestinal tissue after Porcupine Inhibitor treatment or vehicle control
RNA-seq of coding RNA
Mus musculus
20
31/01/2018
ENA
92
Gene expression analysis of breast adenocarninoma cell line T47D treated with particulate matter PM2.5 sampled near the municipal solid waste incineration plant of Bologna city
transcription profiling by array
Homo sapiens
23
31/01/2018
-
64
-
Single-cell RNAseq of Human T lymphocyte derived from H7N9 infected patients
RNA-seq of coding RNA from single cells
Homo sapiens
476
30/01/2018
-
ENA
182
-
Transcription profiling by array of ESC derived hepatocytes treated with either vehicle or high energy substrates to model non alcoholic fatty liver disease
transcription profiling by array
Homo sapiens
12
30/01/2018
-
66
-
ChIP-on-chip of Sgs1 and gammaH2A and DNA:RNA hybrids in wild type and SGS1 mutants
ChIP-chip by tiling array
Saccharomyces cerevisiae
13
30/01/2018
57
-
Trancriptomic profiling of HCT116 colon cancer cells with or without PBRM1 knock-down by RNAi
RNA-seq of coding RNA
Homo sapiens
6
30/01/2018
ENA
80
-
Tissue-specific DNase-seq during Drosophila melanogaster embryogenesis
DNA-seq
Drosophila melanogaster
2
29/01/2018
-
ENA
150
-
Assessing genome instability in Bloom syndrome
MNase-seq, RNA-seq of coding RNA
Homo sapiens, Mus musculus
3934
26/01/2018
-
ENA
136
-
Genotyping data for seven patients from three unrelated, consanguineous multiplex families that presented with combined immunodeficiency, and were found to harbour mutations in CARMIL2
genotyping by array
Homo sapiens
14
25/01/2018
31
-
CD1d-dependent immune suppression mediated by regulatory B cells through modulations of iNKT cells
RNA-seq of coding RNA
Mus musculus
16
25/01/2018
-
ENA
157
-
NUDT21 Negatively Regulates PSMB2 and CXXC5 by Alternative Polyadenylation and Contributes to Hepatocellular Carcinoma Suppression
RNA-seq of coding RNA
Homo sapiens
4
25/01/2018
-
ENA
101
-
RNA-seq of whole blood samples from patients with visceral leishmaniasis
RNA-seq of coding RNA
Homo sapiens
17
25/01/2018
-
ENA
138
-
Expression quantitative trait locus analysis of chicken liver
transcription profiling by array
Gallus gallus
72
25/01/2018
-
53
-
RNAseq analysis of human peritoneal dialysis effluent cells treated with or without alanyl-glutamine supplemented peritoneal dialysis fluid in a randomized controlled cross-over pilot study
RNA-seq of coding RNA
Homo sapiens
11
25/01/2018
-
ENA
61
-
miRNA analysis of human peritoneal dialysis effluent cells treated with or without alanyl-glutamine supplemented peritoneal dialysis fluid in a randomized controlled cross-over pilot study
microRNA profiling by array
Homo sapiens
10
25/01/2018
-
54
-
ChIP-seq of components of the PRC1.6 complex in mouse embryonic stem cells
ChIP-seq
Mus musculus
4
24/01/2018
-
ENA
122
-
ChIP-seq of components of the PRC1.6 complex in HEK293 cells where single components were deleted
ChIP-seq
Homo sapiens
22
24/01/2018
-
ENA
97
-
RNA-seq of gene expression changes in HEK293 cells after deletion of PRC1.6 complex component MGA
RNA-seq of coding RNA
Homo sapiens
6
24/01/2018
-
ENA
78
-
ChIP-seq of CD117-positive primary hematopoietic precursor cell from Meer mice that carry a leukemogenic knock-in of an inducible ENL-ER portion into the mouse Mll locus
ChIP-seq
Mus musculus
7
23/01/2018
-
ENA
71
-
Transcription profiling by array of human hepatocarcinoma SMMC-7721 cells treated with a new compound IMB5043 against untreated controls
transcription profiling by array
Homo sapiens
2
22/01/2018
-
93
-
Microarray gene expression profiling of microglia from control and C6 glioma tumor-bearing brain hemisphere in the rat
transcription profiling by array
Rattus norvegicus
8
22/01/2018
-
95
-
RNA-Seq analysis of an industry isolated Pseudomonas aeruginosa strain following exposure to preservatives and product formulations
RNA-seq of coding RNA
Pseudomonas aeruginosa
32
20/01/2018
-
ENA
114
-
RNA-sequencing of coding RNA from human purified intestinal epithelial samples and organoids derived from foetal and paediatric small and large intestine
RNA-seq of coding RNA
Homo sapiens
50
20/01/2018
-
ENA
358
Transcriptional profiling by array of chronic myeloid leukaemia (CML) stem/progenitor cells (CD34+38-) treated with tyrosine kinase inhibitors (imatinib, dasatinib and nilotinib) at different time points (8 hours and 7 days) against untreated controls
transcription profiling by array
Homo sapiens
49
20/01/2018
-
420
-
Time-lapse Deep-seq of E. coli Metabolite Production Pathway
DNA-seq
Escherichia coli K-12
26
19/01/2018
-
ENA
112
-
Genome-wide characterisation of DNA methylation in an invasive Lepidopteran pest, the cotton bollworm Helicoverpa armigera
methylation profiling by high throughput sequencing
Helicoverpa armigera
1
19/01/2018
-
ENA
73
-
RNA-seq transcriptome profiling of the psychrophilic diatom Fragilariopsis cylindrus under six treatments simulating conditions within sea ice
RNA-seq of coding RNA
Fragilariopsis cylindrus
15
18/01/2018
-
ENA
94
-
Ribosome profiling of the retrovirus murine leukemia virus in Rat2 cells
RNA-seq of coding RNA
Rattus norvegicus
9
17/01/2018
-
ENA
101
-
Transcription profiling by array of oral squamous cell cancer (OSCC) surgical margins defined by narrow band imaging
transcription profiling by array
Homo sapiens
49
17/01/2018
117
RNA-seq of human normal mammary gland cells FACS sorted into three populations: ALDH+, ALDH-CD44+CD24-, and ALDH-CD44-CD24+
RNA-seq of coding RNA
Homo sapiens
9
17/01/2018
-
ENA
155
-
microRNA profiling by array of paired samples tumor tissue/normal adjacent tissue from colon cancer patients
microRNA profiling by array
Homo sapiens
10
17/01/2018
-
164
-
MicroRNA analysis in HPV-positive and HPV-negative cervical cancer cell lines
microRNA profiling by array
Homo sapiens
6
16/01/2018
-
128
-
MicroRNA expression profile in human foreskin keratinocytes (HFKs) transduced with retroviral vectors carrying E6 and E7 genes of either HPV6 or HPV16 and with the LXSN empty vector
microRNA profiling by array
Homo sapiens
23
16/01/2018
-
87
-
Transcriptional profiling of triple-negative breast cancer cell lines treated with OTX015
transcription profiling by array
Homo sapiens
11
16/01/2018
128
-
Effect of HE4 overexpression or treatment with recombinant HE4 protein on OVCAR8 ovarian cancer cells
transcription profiling by array
Homo sapiens
12
15/01/2018
145
-
Transcription profiling by array of U-2987-MG glioma derived cell line to investigate the effect of Snail1 overexpression compared to control
transcription profiling by array
Homo sapiens
8
15/01/2018
-
114
-
RNA-seq of platelets derived from blood of healthy human donors in response to physiological stimuli collagen or Thrombin Receptor Activating Peptide compared to untreated controls
RNA-seq of coding RNA
Homo sapiens
9
15/01/2018
-
ENA
815
-
Whole transcriptome profiling by microarray of monocytes stimulated with LPS and treated with trabectedin, lurbinectedin or doxorubicin
transcription profiling by array
Homo sapiens
16
15/01/2018
88
Transcription profiling by array of carcinoma-stem-like cells (CSC) extracted from a primary ovarian cancer cell line
transcription profiling by array
Homo sapiens
6
15/01/2018
72
-
Comparative transcriptomics of Rhizobium mesoamericanum STM3625, Cupriavidus taiwanensis LMG19424 and Burkholderia phymatum STM815 when induced by root exudates of Mimosa pudica
RNA-seq of coding RNA
Burkholderia phymatum STM815, Cupriavidus taiwanensis LMG 19424, Rhizobium mesoamericanum STM3625
18
15/01/2018
-
ENA
63
-
microRNA expression profiling of CML and normal quiescent cells
microRNA profiling by array
Homo sapiens
10
12/01/2018
-
96
-
Immune transcriptional profiling in end-stage renal disease
transcription profiling by array
Homo sapiens
480
11/01/2018
190
-
Dry seed transcriptome differences associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
transcription profiling by array
Arabidopsis thaliana
12
10/01/2018
102
-
Fibroblasts potentiate melanoma cells in vitro invasivity induced by UV-irradiated keratinocytes - transcription profiling
transcription profiling by array
Homo sapiens
10
10/01/2018
-
84
-
Targeted next generation sequencing of cfDNA from lung cancer patients enrolled in the GALAXY-1 trial (NCT01348126)
DNA-seq
Homo sapiens
306
10/01/2018
-
ENA
224
-
Transgenic expression of BEN, a member of TFII-I family, in various murine adipose tissues
RNA-seq of coding RNA
Mus musculus
16
10/01/2018
-
ENA
99
-