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AccessionTitleTypeOrganismAssaysReleasedProcessedRawViewsAtlas
Wing disc transcriptomic variation from 32 Drosophila genetic reference panel (DGRP) lines selected for a broad range of wing sizes
RNA-seq of coding RNA
Drosophila melanogaster
130
Yesterday
-
ENA
16
-
Single cell RNA seq of influenza tetramer specific CD8+ T cells from baseline, acute and long term memory timepoints
RNA-seq of coding RNA from single cells
Homo sapiens
840
Yesterday
-
ENA
-
-
Opossum RNA-seq time-series of the development of seven major organs
RNA-seq of coding RNA
Monodelphis domestica
269
Yesterday
ENA
-
-
Human RNA-seq time-series of the development of seven major organs
RNA-seq of coding RNA
Homo sapiens
313
Yesterday
ENA
39
-
Rhesus macaque RNA-seq time-series of the development of six major organs
RNA-seq of coding RNA
Macaca mulatta
177
Yesterday
ENA
5
-
Rat RNA-seq time-series of the development of seven major organs
RNA-seq of coding RNA
Rattus norvegicus
362
Yesterday
ENA
-
-
Mouse RNA-seq time-series of the development of seven major organs
RNA-seq of coding RNA
Mus musculus
317
Yesterday
ENA
-
-
Rabbit RNA-seq time-series of the development of seven major organs
RNA-seq of coding RNA
Oryctolagus cuniculus
338
Yesterday
ENA
-
-
Chicken RNA-seq time-series of the development of seven major organs
RNA-seq of coding RNA
Gallus gallus
217
Yesterday
ENA
-
-
ChIP-seq of FLAG-tagged SMARCAD1 in female mouse embryonic stem cells (PGK12.1 XX)
ChIP-seq
Mus musculus
3
17/02/2019
-
ENA
-
-
ChIP-Seq of chromatin remodeler SMARCAD1 and H3K9me3 in female mouse embryonic stem cells (PGK12.1 XX)
ChIP-seq
Mus musculus
7
17/02/2019
-
ENA
-
-
ChIP-Seq of SMARCAD1 and KAP1 in male mouse embryonic stem cells (E14)
ChIP-seq
Mus musculus
11
17/02/2019
-
ENA
-
-
Genome-scale transcriptomic study into the role of AbsA2 in regulating antibiotic biosynthesis in Streptomyces coelicolor
transcription profiling by array
Streptomyces coelicolor A3(2)
12
16/02/2019
41
-
Genome-scale ChIP-on-chip study into the role of AbsA2 in regulating antibiotic biosynthesis in Streptomyces coelicolor
ChIP-chip by array
Streptomyces coelicolor A3(2)
12
16/02/2019
33
-
Small RNA-Seq of LSK Slam HSCs MxCre Control vs MxCre Meg3 flox (Meg3 KO)
microRNA profiling by high throughput sequencing
Mus musculus
6
15/02/2019
-
ENA
16
-
Targeted resequencing of phenology genes in a diverse panel of barley varieties
DNA-seq
Hordeum vulgare subsp. vulgare
1990
15/02/2019
-
ENA
17
-
Gene expression of CD8 T cell progenies generated via asymmetric cell division
RNA-seq of coding RNA
Mus musculus
24
14/02/2019
-
ENA
14
-
Protein profile of vitreous from Reeler model
proteomic profiling by array
Mus musculus
1
13/02/2019
-
15
-
RNA-seq analysis of C. elegans mina-1 mutants
RNA-seq of coding RNA
Caenorhabditis elegans
6
13/02/2019
-
ENA
18
-
RNA-seq analysis of MES-MM 98 and REN mesothelioma cell lines modulated for miR-24-3p expression
RNA-seq of coding RNA
Homo sapiens
12
13/02/2019
-
ENA
24
-
Functional implications of miR-19 in the migration of newborn neurons in the adult brain
RNA-seq of coding RNA
Rattus norvegicus
12
13/02/2019
-
ENA
18
-
Widespread endogenous retrotransposition generates somatic genetic mosaicism during human development
DNA-seq
Homo sapiens
269
13/02/2019
-
ENA
20
-
Seminal plasma exposures strengthen vaccine responses in the female reproductive tract mucosae
transcription profiling by array
Macaca fascicularis
59
12/02/2019
-
18
-
Characterization of a tetra-culture system combining lung alveolar epithelial cells, endothelial cells, macrophages, and mast cells in a three-dimensional orientation
transcription profiling by array
Homo sapiens
96
12/02/2019
15
-
RNA-seq of effector (CD43+) CD8+ T cells, CD45+ hematopoietic cells and CD45- tumor/stromal cells from mice bearing bilateral AT-3 tumors following radio-immunotherapy of which one tumor was irradiated
RNA-seq of coding RNA
Mus musculus
18
12/02/2019
-
ENA
17
-
Transcription profiling by array of PBMCs from patients with Systemic Sclerosis compared to healthy donors
transcription profiling by array
Homo sapiens
12
12/02/2019
-
19
-
RNA-seq of whole body L2 females, L2 hermaphrodites, L2 converted females (hermaphrodite-fated larvae induced to develop as females), adult males and mixed stages individuals from the three-sexed nematode Auanema rhodensis
RNA-seq of coding RNA
Auanema rhodensis
15
11/02/2019
-
ENA
22
-
RIP-seq to identify transcripts interacting with pluripotency factors in mouse embryonic stem cells
RIP-seq
Mus musculus
20
11/02/2019
ENA
17
-
Microarray of hippocampus from 5mo wt, Bmal1 KO and Nr1d1 (Rev-Erb-alpha) KO mice at a single timepoint
transcription profiling by array
Mus musculus
8
11/02/2019
-
28
-
ChIRP-seq of snRNA 7SK in Sox2 depleted mouse embryonic stem cells
ChIP-seq
Mus musculus
10
11/02/2019
ENA
20
-
Microarray of five Caenorhabiditis elegans genotypes with or without a human alpha-synuclein transgene in the genetic background
transcription profiling by array
Caenorhabditis elegans
16
11/02/2019
-
32
-
RNA-Seq analysis of a Reciprocal Transplant experiment for two strains of Spodoptera frugiperda fed on rice or corn, in laboratory and natural populations
RNA-seq of coding RNA
Spodoptera frugiperda
21
11/02/2019
ENA
24
-
RNA-seq of liver from pigs divergent in feed efficiency highlights shifts in macronutrients metabolism, hepatic growth and immune response
RNA-seq of coding RNA
Sus scrofa
20
11/02/2019
-
ENA
38
-
Methylation profiling of human germ cell cancers of testicular and ovarian origin
methylation profiling by array
Homo sapiens
8
11/02/2019
-
26
-
RNA-seq of human testicular germ cell cancer
RNA-seq of coding RNA
Homo sapiens
2
11/02/2019
-
ENA
22
-
Unique inflammatory signature in hemophilic arthropathy : epigenetic changes due to interaction between blood and fibroblast-like synoviocytes
microRNA profiling by array
Homo sapiens
30
10/02/2019
-
26
-
Dynamical Modeling of Secondary Metabolism and Metabolic Switches in Streptomyces xiamenensis 318
RNA-seq of coding RNA
Streptomyces xiamenensis
8
10/02/2019
-
ENA
27
-
Tumor metastasis to lymph node requires YAP-dependent metabolic adaptation
RNA-seq of coding RNA
Mus musculus
12
09/02/2019
-
ENA
31
-
Endoderm Differentiation - Single Cell RNA-sequencing
RNA-seq of coding RNA from single cells
Homo sapiens
1024
09/02/2019
-
ENA
59
-
Microarray of human primary CD16+ monocytes treated with fractalkine (CX3CL1) against untreated controls
transcription profiling by array
Homo sapiens
8
08/02/2019
-
23
-
CLIP-seq analysis of C.elegans MINA-1::GFP transgenic animals
CLIP-seq
Caenorhabditis elegans
4
08/02/2019
-
ENA
29
-
Ago-RIP-Seq Analysis to Identify miR-375 Targets in Human Macrophages
RIP-seq
Homo sapiens
12
08/02/2019
ENA
29
-
Gene expression array of human breast cancer cells MCF7 with DMSO-EPZ- EPZ+E2 and shDOT1L+E2 and ZR-75-1 after treatment with DMSO and EPZ
transcription profiling by array
Homo sapiens
24
08/02/2019
25
-
Histone ChIPSeq of H3K79me2 before and after EPZ004777 treatment in MCF7 breast cancer cells
ChIP-seq
Homo sapiens
6
08/02/2019
-
ENA
28
-
miRseq Analysis of Human Macrophages Co-cultured with MCF-7 Breast Cancer Cells
microRNA profiling by high throughput sequencing
Homo sapiens
48
08/02/2019
ENA
28
-
ChIP-Seq of ERalpha and DOT1L in MCF7 cell before and after EPZ004777 and ICI 182,780 treatment
ChIP-seq
Homo sapiens
21
08/02/2019
-
ENA
30
-
RNA-Seq of human breast cancer cells MCF7 treated with EPZ004777 or DMSO for 3 or 6 days
RNA-seq of coding RNA
Homo sapiens
11
08/02/2019
-
ENA
30
-
NascentSeq of human breast cancer cell MCF7 treated with EPZ, ICI and DMSO at 3 or 6 days
RNA-seq of coding RNA
Homo sapiens
13
08/02/2019
-
ENA
29
-
STAT1 and STAT3 ChIP-seq for naive and effector memory (Tem) CD4 T-cells after IL-6 treatment
ChIP-seq
Mus musculus
8
08/02/2019
-
ENA
50
-
RNA-seq of wild type Arabidopsis seedlings to compare cross-replicate variability and false discovery rate in differential gene expression tools
RNA-seq of coding RNA, RNA-seq of non coding RNA
Arabidopsis thaliana
17
08/02/2019
-
ENA
32
-
RNA sequencing data of osteoclasts subtypes in bone
RNA-seq of coding RNA
Mus musculus
4
07/02/2019
-
ENA
23
-
Temporal enhancer profiling of parallel lineages identifies AHR and GLIS1 as regulators of mesenchymal multipotency
ChIP-seq, RNA-seq of coding RNA
Mus musculus
83
07/02/2019
-
ENA
27
-
Analysis of the Hfq regulon in Pseudomonas fluorescens SBW25
RNA-seq of coding RNA
Pseudomonas fluorescens
4
07/02/2019
ENA
392
-
ATAC-seq of Het1A cells with overexpression of HNF4A or GATA6
ATAC-seq
Homo sapiens
10
04/02/2019
-
ENA
23
-
ChIP-seq of HNF4A and GATA6 in oesophageal adenocaricnoma OE19 cells
ChIP-seq
Homo sapiens
5
04/02/2019
-
ENA
22
-
Total RNA-seq of human oesophageal adenocarcinoma cell line OE19 treated with siNT, siHNF4A, siGATA6 and siHNF4A+siGATA6 for 72 hours
RNA-seq of coding RNA
Homo sapiens
12
04/02/2019
-
ENA
24
-
ATAC-seq of human Barrett's oesophagus tissue
ATAC-seq
Homo sapiens
4
04/02/2019
-
ENA
25
-
RNA-seq of non-ischemic heart tissues treated with a traditional Chinese medicine formula (BYD) against myocardial ischemia in Sprague Dawley rats
RNA-seq of coding RNA
Rattus norvegicus
9
04/02/2019
ENA
24
-
ChIP-seq of the cyclic-AMP Receptor Protein (CRP) and RNA polymerase sigma 70 subunit in Vibrio cholerae
ChIP-seq
Vibrio cholerae
6
04/02/2019
-
ENA
15
-
RNAseq of proneural glioblastoma stem-like cells 72 hours after infection with human cytomegalovirus (CMV) Towne strain
RNA-seq of coding RNA
Homo sapiens
6
02/02/2019
-
ENA
40
-
Identification of E93 binding sites in Drosophila melanogaster
ChIP-seq
Drosophila melanogaster
2
02/02/2019
-
ENA
32
-
RNA-seq of HER2-positive breast cancer BT474 cell line in response to KDM5 ihibition
RNA-seq of coding RNA
Homo sapiens
6
01/02/2019
-
ENA
64
-
Roles of mRNA decay in liver development
RNA-seq of coding RNA
Mus musculus
9
01/02/2019
-
ENA
41
-
Novel coronary atherothrombosis genes identified by blood cell transcriptome profiling
transcription profiling by array
Homo sapiens
68
01/02/2019
-
44
-
Neochloris oleoabundans RNA sequencing of 5 growth conditions, 8 samples
RNA-seq of coding RNA
Neochloris oleoabundans
11
01/02/2019
-
ENA
43
-
Gene expression microarray of oral epithelial cells infected with Candida albicans
transcription profiling by array
Homo sapiens
15
31/01/2019
-
-
-
Transcription profile using LeMCM2-silenced tomato lines
transcription profiling by array
Solanum lycopersicum
4
31/01/2019
-
-
-
Transcriptome analysis of AML samples at diagnosis and relapse after Hematopoietic Stem Cell Transplantation (HSCT)
transcription profiling by array
Homo sapiens
28
31/01/2019
-
60
-
Transcriptome analysis of AML samples at diagnosis and relapse after Hematopoietic Stem Cell Transplantation (HSCT)
transcription profiling by array
Homo sapiens
14
31/01/2019
-
44
-
Transcriptome-wide analysis of filarial extract-primed human monocytes reveal changes in LPS-induced PTX3 expression levels
transcription profiling by array
Homo sapiens
74
31/01/2019
-
51
-
A comprehensive reference transcriptome for Brachypodium distachyon grain development incorporating key developmental transitions and identifying potential regulators
RNA-seq of coding RNA
Brachypodium distachyon
24
31/01/2019
-
ENA
53
-
RNA-Seq data of terminal differentiated cells in Dictyostelium discoideum
RNA-seq of coding RNA
Dictyostelium discoideum
11
31/01/2019
ENA
50
-
Gene Expression Profiling of FFPE Pre-treatment Endoscopic Biopsies from Oesophageal Adenocarcinoma Patients Treated with Neo-adjuvant Chemotherapy and Surgical Resection
transcription profiling by array
Homo sapiens
273
31/01/2019
-
50
-
Investigation of placental gene expression in obese women exposed to Metformin during pregnancy
transcription profiling by array
Homo sapiens
108
31/01/2019
-
83
-
Transcription profiling by array of miRNA in mouse models of melanoma comparing niches of tumour tissue to adjacent normal tissue
transcription profiling by array
Mus musculus
18
31/01/2019
-
46
-
Expression via microarray of total RNA isolated from B16 murine melanoma cells stimulated with Interferon-gamma versus untreated controls
transcription profiling by array
Mus musculus
9
31/01/2019
-
48
-
RNA-seq to investigate the effect of long term exposure to fish kairomones on gene expression in Daphnia galeata
RNA-seq of coding RNA
Daphnia galeata galeata
12
31/01/2019
-
ENA
50
-
Transcriptomic analysis of Urokinase plasminogen activator receptor silenced MDA-MB-231 breast cancer cells, stimulated with radiation
transcription profiling by array
Homo sapiens
4
31/01/2019
-
42
-
Genotyping analysis of AML samples at diagnosis and relapse after Hematopoietic Stem Cell Transplantation (HSCT)
genotyping by array
Homo sapiens
24
30/01/2019
-
33
-
Custom design microarray for molecular drug susceptibility testing and strain typing of tuberculosis
transcription profiling by array
Mycobacterium tuberculosis
16
30/01/2019
-
39
-
Assessment of a 72-hour repeated exposure to Swedish snus extract and total particulate matter from 3R4F cigarettes on gingival organotypic cultures (miRNA data)
transcription profiling by array
Homo sapiens
176
30/01/2019
36
-
Assessment of a 72-hour repeated exposure to Swedish snus extract and total particulate matter from 3R4F cigarettes on gingival organotypic cultures (mRNA data)
transcription profiling by array
Homo sapiens
179
30/01/2019
34
-
Simultaneous in vivo enzyme and host engineering through laboratory evolution
DNA-seq
Escherichia coli BW25113
45
30/01/2019
-
ENA
41
-
Transcription profiling by array of human CD40L+ T cells to assess the nature of CD8+CD40L+ memory T cells
transcription profiling by array
Homo sapiens
15
30/01/2019
37
-
Transcriptome analysis of AML samples at diagnosis and relapse after Hematopoietic Stem Cell Transplantation (HSCT)
RNA-seq of coding RNA
Homo sapiens
30
29/01/2019
-
ENA
34
-
Comprehensive investigation of miRNome identifies novel candidate miRNA-mRNA interactions implicated in T-cell acute lymphoblastic leukemia
microRNA profiling by high throughput sequencing
Homo sapiens
39
28/01/2019
ENA
49
-
mRNA profile of HeLaS3 cell line and AGO2 Knock-Out HeLaS3 subclone
transcription profiling by array
Homo sapiens
6
28/01/2019
-
40
-
Controlled library preparation of STR-bearing minigenes at three amplification time-points
DNA-seq
synthetic construct
313
26/01/2019
-
ENA
144
-
Gene expression comparing Memory Bystander T cell Function with and without LCMV infection
RNA-seq of coding RNA
Mus musculus
4
25/01/2019
-
ENA
54
-
Larvae of Drosophila melanogaster exhibit transcriptional activation of immune response pathways and antimicrobial peptides during recovery from supercooling stress
transcription profiling by array
Drosophila melanogaster
9
25/01/2019
-
49
-
Single-cell RNA sequencing of mouse germ cells
RNA-seq of coding RNA from single cells
Mus musculus
440
25/01/2019
ENA
214
-
CUT&RUN chromatin profiling of H3K4me3, H3K27ac and H3K9me3 histone marks in spermatids and spermatocytes
ChIP-seq
Mus musculus
96
25/01/2019
-
ENA
101
-
A Nucleosome Destabilizing Factor that Facilitates Transcription in Chromatin
ChIP-seq
Homo sapiens, Mus musculus
20
25/01/2019
ENA
52
-
Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
transcription profiling by array
Arabidopsis thaliana
72
25/01/2019
-
108
-
RNA-sequencing of inflamed intestinal mucosa of inflammatory bowel disease patients
RNA-seq of coding RNA
Homo sapiens
44
24/01/2019
ENA
61
-
Expression study of the Hodgkin’s lymphoma cell line L-1236 upon CRISPR Cas9-mediated knockout of lymphotoxin alpha (LTA) compared to control
transcription profiling by array
Homo sapiens
9
24/01/2019
45
-
PRR14L mutations are associated with chromosome 22 acquired uniparental disomy, age related clonal hematopoiesis and myeloid neoplasia
DNA-seq
Homo sapiens
15
22/01/2019
-
ENA
105
-
Drought treatment of Populus tremula × tremuloides with suppressed PICKLE or FDL2 gene expression
RNA-seq of coding RNA
Populus tremula x Populus tremuloides
44
20/01/2019
-
ENA
116
-
Drought treatment and ABA feeding to ABA insensitive Populus tremula × tremuloides lines
RNA-seq of coding RNA
Populus tremula x Populus tremuloides
36
20/01/2019
-
ENA
93
-
Abscisic acid (ABA) application to Populus × canescens in hydroponics
RNA-seq of coding RNA
Populus tremula x Populus alba
24
20/01/2019
-
ENA
66
-
Regional differences in human biliary tissues and corresponding in vitro derived organoids
RNA-seq of coding RNA
Homo sapiens
58
20/01/2019
-
ENA
106
-
Proteogenomics uncovers critical elements of host response in bovine soft palate epithelial cells following in vitro infection with foot-and-mouth disease virus (FMDV)
RNA-seq of coding RNA
Bos taurus
52
18/01/2019
ENA
84
-
Chip-Seq of wild-type GATA3 and two mutants (335fs, 308*) in the ZR75-1 human breast cancer cell line
ChIP-seq
Homo sapiens
6
18/01/2019
ENA
81
-
RNA-seq of chicken spleens after LPS injection
RNA-seq of coding RNA
Gallus gallus
10
18/01/2019
-
ENA
73
-
RNA-seq of diurnal gene expression of Cyanophora paradoxa, Porphyridium purpureum, Klebsormidium nitens, Physcomitrella patens, Selaginella moellendorfii and Picea abies
RNA-seq of coding RNA
Cyanophora paradoxa, Klebsormidium nitens, Physcomitrella patens, Picea abies, Porphyridium purpureum, Selaginella moellendorffii
234
16/01/2019
-
ENA
163
-
Transcriptome profiling of liver samples of C/EBPß ∆uORF mice
RNA-seq of coding RNA
Mus musculus
24
16/01/2019
-
ENA
77
-
RNAseq of murine small intestinal tissue following epithelium-specific deletion of Bcl9/9l +/- Apc +/- mutant B-catenin
RNA-seq of coding RNA
Mus musculus
18
15/01/2019
-
ENA
125
-
RNAseq of Human Umbilical Vein Endothelial Cells treated with Insulin in the presence or absence of TGF-beta kinase inhibitor SB431542 for 90 minute
RNA-seq of coding RNA
Homo sapiens
16
15/01/2019
-
ENA
75
-
The impact of heat stress on imipenem susceptibility in imipenem resistant NTHi
RNA-seq of coding RNA
Haemophilus influenzae
4
15/01/2019
-
ENA
80
-
RNA-seq of murine spleen B-cells after pentanoate treatment compared to untreated control
RNA-seq of coding RNA
Mus musculus
9
15/01/2019
-
ENA
62
-
RNA-seq of murine CD4 T cells after pentanoate treatment compared to untreated control
RNA-seq of coding RNA
Mus musculus
6
15/01/2019
-
ENA
54
-
RNA-seq analysis of Clostridium beijerinckii DSM 6423 at early exponential, acetogenic, and solventogenic growth phase on rhamnose compared to glucose
RNA-seq of coding RNA
Clostridium beijerinckii
12
14/01/2019
-
ENA
69
-
Differential gene expression analysis by RNA-Seq for the bldC deletion strain and the wild type of Streptomyces venezuelae strain NRRL B-65442 after 10 and 14 hours of culture
RNA-seq of coding RNA
Streptomyces venezuelae
8
14/01/2019
ENA
58
-
Identification by ChIP-Seq of the binding sites of the developmental protein BldC in the genome of Streptomyces venezuelae
ChIP-seq
Streptomyces venezuelae
6
14/01/2019
ENA
45
-
RNA-seq of mouse embryonic pancreatic mesenchyme
RNA-seq of coding RNA
Mus musculus
6
14/01/2019
ENA
48
-
Transcriptome comparison of human Extra-thymic AIRE expressing cells to medullary thymic epithelial cells and conventional antigen presenting dendritic cells
RNA-seq of coding RNA
Homo sapiens
11
14/01/2019
-
ENA
45
-
Single cell RNA sequencing of putative AIRE+ dendritic cells from human paediatric tonsillitis
RNA-seq of coding RNA from single cells
Homo sapiens
384
14/01/2019
-
ENA
90
-
Microarray profiling of different spermatogenic cells
transcription profiling by array
Mus musculus
10
14/01/2019
-
52
-
Small RNA profiling of TUT4 and TUT7-deficient mouse pachytene-diplotene cells
RNA-seq of non coding RNA
Mus musculus
6
14/01/2019
-
ENA
44
-
Microarray profiling of UPF2-deficient mouse GV oocytes
transcription profiling by array
Mus musculus
3
14/01/2019
-
51
-
Microarray profiling of mouse pachytene cells deficient for UPF2 or both TUT4 and TUT7
transcription profiling by array
Mus musculus
14
14/01/2019
-
51
-
RNAseq analysis of Chrnb4-cre driven Dicer conditional knockout (Dicer CKO) whole retinas
RNA-seq of coding RNA
Mus musculus
6
14/01/2019
-
ENA
42
-
miRNAseq analysis of Chrnb4-cre driven Dicer conditional knockout (Dicer CKO) whole retinas
microRNA profiling by high throughput sequencing
Mus musculus
12
14/01/2019
-
ENA
30
-
The impact of early WNT pathway inhibition (day 1 of differentiation) during human pluripotent stem cell differentiation towards cardiomyocytes
transcription profiling by array
Homo sapiens
16
13/01/2019
52
-
Recurrent activating STAT5B N642H mutations in myeloid neoplasms with eosinophilia
RNA-seq of coding RNA
Homo sapiens
14
12/01/2019
-
ENA
62
-
RNASeq: Aryl hydrocarbon receptor governs a transcriptional programme that determines regulatory B cell differentiation and function
RNA-seq of coding RNA
Mus musculus
12
12/01/2019
-
ENA
43
-
3' mRNA-seq of neurites and soma isolated from mESC-derived neurons
RNA-seq of coding RNA
Mus musculus
5
12/01/2019
-
ENA
45
-
RNA-seq of E. coli strains overproducing DNA "damage-up" proteins (DDPs)
RNA-seq of coding RNA
Escherichia coli K-12
16
11/01/2019
-
ENA
58
-
RNA-seq of five Populus x canescens (Grey poplar) organs/tissues during periodic or chronic drought-heat stress treatment and after recovery in comparison to untreated controls
RNA-seq of coding RNA
Populus tremula x Populus alba
119
11/01/2019
ENA
37
-
Microarray experiment on M. incognita infected and uninfected material in A.thaliana Col-0 plants and A. thaliana ERF6 mutated plants
transcription profiling by array
Arabidopsis thaliana
21
10/01/2019
-
28
-
H3K4me3 and H3K27me3 chromatin states in the Arabidopsis shoot phloem companion cells from INTACT reporter lines
ChIP-seq
Arabidopsis thaliana
24
09/01/2019
-
ENA
42
-
Transcriptomes and differential gene expression in the Arabidopsis shoot phloem companion cells during flowering
RNA-seq of coding RNA
Arabidopsis thaliana
12
09/01/2019
-
ENA
36
-
Variation in RNA expression in a panel of 30 breast cancer cell lines
RNA-seq of coding RNA
Homo sapiens
30
09/01/2019
ENA
305
-
RNAseq of tumor samples from CT26 syngeneic mouse treated with a PI3Ka/d inhibitor (AZD8835)
RNA-seq of coding RNA
Mus musculus
20
08/01/2019
-
ENA
50
-
Transcription profiling by array to compare melanoma cell lines with differing aggressiveness (A375 and SK-MEL-28)
transcription profiling by array
Homo sapiens
6
08/01/2019
59
-
RNA-seq from knee and hip osteoarthritis cartilage
RNA-seq of coding RNA
Homo sapiens
70
07/01/2019
-
ENA
46
-
Methylation arrays (MethylationEPIC) of longitudinal cord and peripheral blood from children aged 0, 5 and 10 years old
methylation profiling by array
Homo sapiens
66
07/01/2019
48
-
RNA-seq of human breast cancer cell lines: CAL120; MDAMB468 and BT549 incubated in DMEM-F12 and Plasmax in normoxia (21%O2) and hypoxia (0.1% O2)
RNA-seq of coding RNA
Homo sapiens
36
07/01/2019
-
ENA
62
-
Transcription profiling of PIF4/DREB1A double-overexpressing Arabidopsis lines
transcription profiling by array
Arabidopsis thaliana
8
07/01/2019
-
28
-
Time line RNAseq of iPSC-derived neurons from ASD and control subjects
RNA-seq of coding RNA
Homo sapiens
117
07/01/2019
-
ENA
58
-
Single-cell RNA sequencing reveals a dynamic stromal niche within the evolving tumour microenvironment
RNA-seq of coding RNA from single cells
Mus musculus
6614
04/01/2019
-
ENA
70
-
RNA-Seq of round spermatids comparing WT (FVBNJ) to H2A.B3 knock-out mice
RNA-seq of coding RNA
Mus musculus
6
04/01/2019
-
ENA
47
-
RNA sequencing experiment of S. Cerevisiae strain CEN.PK113-7D in four different chemostat conditions
RNA-seq of coding RNA
Saccharomyces cerevisiae
48
03/01/2019
ENA
56
-
CAGE experiment of S. Cerevisiae strain CEN.PK113-7D in four different chemostat conditions
RNA-seq of coding RNA
Saccharomyces cerevisiae
8
03/01/2019
ENA
60
-
RNA-Seq of CD19+ B-cell populations from patients with juvenile dermatomyositis and controls
RNA-seq of coding RNA
Homo sapiens
22
03/01/2019
-
ENA
65
-
RNA-seq of Mus musculus primary neural stem cells with MHC I knockout
RNA-seq of coding RNA
Mus musculus
12
02/01/2019
-
ENA
59
-
MicroRNA profiling of inguinal lymph nodes from mice with delayed hypersensitivity treated with indoles (I3C and DIM)
microRNA profiling by array
Mus musculus
6
02/01/2019
-
55
-
RNA-seq of D. melanogaster S2 cells upon depletion of dCoREST and its interacting partners compared to control
RNA-seq of coding RNA
Drosophila melanogaster
21
01/01/2019
-
ENA
60
-
RNA-seq of Drosophila melanogaster testes upon knock-down of dCoREST, dLSD1 and controls
RNA-seq of coding RNA
Drosophila melanogaster
15
01/01/2019
-
ENA
60
-
RNA-seq of Hymenoscyphus koreanus F52847-1 grown on potato dextrose medium
RNA-seq of coding RNA
Hymenoscyphus koreanus
1
01/01/2019
-
ENA
56
-
RNA-seq of Hymenoscyphus linearis chi01 grown on potato dextrose medium
RNA-seq of coding RNA
Hymenoscyphus linearis
1
01/01/2019
-
ENA
57
-
Gene expression profiling of Fowlpox knock-out mutant viruses using Affymetrix GeneChip Chicken Genome Arrays
transcription profiling by array
Gallus gallus
197
01/01/2019
56
-
microRNA profiling by array of human skin melanoma and microenvironment
microRNA profiling by array
Homo sapiens
5
01/01/2019
-
44
-
CGH analysis of human colorectal carcinoma HCT116 cells that escaped from entescence
comparative genomic hybridization by array
Homo sapiens
40
01/01/2019
48
-
RNA Seq of colonic Lgr5+ epithelial stem cells in Il22+/+ and Il22-/- mice during homeostasis and 24h after irradiation with 8 Gy
RNA-seq of coding RNA
Mus musculus
12
01/01/2019
-
ENA
60
-
RNA-sequencing of human embryonic and fetal urinary bladder and genital tissues
RNA-seq of coding RNA
Homo sapiens
69
01/01/2019
-
ENA
55
-
Gene expression microarray analysis of normal breast tissue biopsies
transcription profiling by array
Homo sapiens
19
01/01/2019
122
-
Small RNA profiling of sheep lymph nodes from paratuberculosis infected and uninfected animals
RNA-seq of non coding RNA
Ovis aries
36
01/01/2019
-
ENA
46
-
Deep RNA Sequencing of native mouse podocytes and non-podocytes glomerular cells
RNA-seq of coding RNA
Mus musculus
4
01/01/2019
ENA
55
-
High expression of legumain in acute lymphoblastic leukemia is associated with central nervous system involvement at initial presentation
transcription profiling by array
Homo sapiens
164
01/01/2019
-
37
-
Dietary enrichments cause alterations in metabolome, transcriptome and improve freeze-tolerance in larvae of the fruit fly (Drosophila melanogaster)
transcription profiling by array
Drosophila melanogaster
9
01/01/2019
-
35
-
Transduced cord blood CD34+ cells with empty vector, AML1-ETO and ETV6-RUNX1
transcription profiling by array
Homo sapiens
30
01/01/2019
-
98
-
Transcription profiling by array of H. sapiens THP1, SupT1, HeLa cell lines and Monocyte-derived macrophage and dendritic cells to investigate response to stimulatus with IFN beta and gamma
transcription profiling by array
Homo sapiens
40
01/01/2019
41
-
Nicotiana tabacum WT; Xanthi and NtSTOP1-RNAi under Aluminium stress
transcription profiling by array
Nicotiana tabacum
4
31/12/2018
-
6
-
RNA-seq comparison of fadR deletion mutant and the wild type strain
RNA-seq of coding RNA
Sulfolobus acidocaldarius DSM 639
4
31/12/2018
-
ENA
35
-
Chronic fast food intake promotes diet-induced obesity and a feminized hepatic gene-expression pattern in male C57BL/6J mice
transcription profiling by array
Mus musculus
29
31/12/2018
35
-
Transcriptome profiling of Arabidopsis mutants of the chlorophyll degradation PAO/Phyllobilin pathway
RNA-seq of coding RNA
Arabidopsis thaliana
23
31/12/2018
-
ENA
26
-
Identification by ChIP-Seq of the binding sites of the developmental protein WhiH in the genome of Streptomyces venezuelae
ChIP-seq
Streptomyces venezuelae
4
31/12/2018
ENA
26
-
Effects of low protein diet-induced Intra-Uterine Growth Restriction in Rat microglial brain cells at P0 and P4. Double Hit at P4 with subclinical doses of IL1B
transcription profiling by array
Rattus norvegicus
18
31/12/2018
-
20
-
Transcription profiling of human hepatocellular carcinoma cell line HuH7 cells stably knocked down for TFPI2, MAFB or MAFF in the presence of all-trans retinoic acid
transcription profiling by array
Homo sapiens
12
31/12/2018
19
-
Transcriptome of murine DC-like XS52 cells stably overexpressing miRNA 223 compared to control XS52 cells
transcription profiling by array
Mus musculus
2
31/12/2018
23
-
Transcription profiling by array of head and neck squamous cell carcinoma samples with focus on extracellular matrix components in stroma
transcription profiling by array
Homo sapiens
54
31/12/2018
-
21
-
FXR activation inhibits CAF tumor-promoting features
RNA-seq of coding RNA
Homo sapiens
6
31/12/2018
-
ENA
19
-
OncoScan for copy number analysis in Kurkenberg tumor metastasized from gastric carcinoma
comparative genomic hybridization by array
Homo sapiens
106
31/12/2018
-
30
-
Dietary carbohydrates in land-locked Atlantic salmon (Salmo salar L.): impact on hepatic metabolism
transcription profiling by array
Salmo salar
20
31/12/2018
-
15
-
Single-cell RNA-seq of CD4+ Treg and Tmem cells from different tissues in mouse and human
RNA-seq of coding RNA from single cells
Homo sapiens, Mus musculus
4221
31/12/2018
-
ENA
81
-
Inter and intra-lineage genetic diversity of Zika virus differs for American isolates
RNA-seq of coding RNA
Zika virus
14
31/12/2018
-
ENA
18
-
Transcription profiling by array of head and neck squamous cell carcinoma samples with focus on extracellular matrix components in margin of surgical resecate
transcription profiling by array
Homo sapiens
44
31/12/2018
33
-
Kinetics of host transcription in CEFs productively infected with recombinant fowlpox virus vaccine vector FP9
transcription profiling by array
Gallus gallus
24
31/12/2018
8
-
Transcriptomic analyses of anti-adipogenic effects of oleuropein in human mesenchymal stem-cells
transcription profiling by SAGE, RNA-seq of coding RNA
Homo sapiens
3
31/12/2018
-
ENA
21
-
Microenvironment-driven resistance to B-Raf inhibition in a melanoma patient is accompanied by broad changes of gene methylation and expression in distal fibroblasts. Transcriptomic study
transcription profiling by array
Homo sapiens
8
31/12/2018
20
-
Microarray analysis of the effects of TNFAIP8 and RARRES1 on global gene expression in prostate cancer PC3 cells against empty vector control
transcription profiling by array
Homo sapiens
9
30/12/2018
-
22
-
Effects of low protein diet-induced Intra-Uterine Growth Restriction in Rat Whole brain at 28 days, and on microglial brain cells at P4. Double Hit with subclinical doses of IL1B, Rescue by Carbetocin treatment
transcription profiling by array
Rattus norvegicus
24
30/12/2018
-
13
-
RNA-seq analysis of Pseudomonas syringae pv. tomato DC3000
RNA-seq of coding RNA
Pseudomonas syringae pv. tomato
3
30/12/2018
ENA
20
-
Quantitative RT-PCR profiling of miRNA expression of non-small cell lung cancer patients against healthy controls
transcription profiling by RT-PCR
Homo sapiens
30
30/12/2018
30
-
The ChIP-Seq binding peak data of the H4K20me3 in mESCs, Pwp1(-/+) ESCs and Pwp1-overexpressed Pwp1(-/+) ESCs
ChIP-seq
Mus musculus
6
30/12/2018
-
ENA
18
-
Gene expression profiling of Hox-driven AML overexpressing JMJD1C
transcription profiling by array
Mus musculus
8
30/12/2018
-
16
-
Transcriptome analysis of Arabidopsis stem cell nuclei at different developmental stages
RNA-seq of coding RNA
Arabidopsis thaliana
20
30/12/2018
-
ENA
27
-
Proteotranscriptomic view on the role of spider silk glands during the silk spinning process
RNA-seq of coding RNA
Nephila clavipes
1
30/12/2018
-
ENA
22
-
Microenvironment-driven resistance to B-Raf inhibition in a melanoma patient is accompanied by broad changes of gene methylation and expression in distal fibroblasts. Genome methylation study
methylation profiling by array
Homo sapiens
6
30/12/2018
-
21
-
microRNA-seq of miRNAs isolated from control or DIS3L2 knockdown HeLa cells
microRNA profiling by high throughput sequencing
Homo sapiens
4
29/12/2018
ENA
33
-
microRNA-seq of miRNAs from control and DIS3L knockdown HeLa cells
microRNA profiling by high throughput sequencing
Homo sapiens
4
29/12/2018
ENA
32
-
miRNA-seq of microRNAs from control or PARN depleted HeLa cells
microRNA profiling by high throughput sequencing
Homo sapiens
8
29/12/2018
ENA
32
-
A screen of Campylobacter jejuni protein microarrays with antisera to identify immunogenic proteins
proteomic profiling by array
Capra hircus, Homo sapiens, Mus musculus, Oryctolagus cuniculus
5
29/12/2018
-
27
-
Neurotrophic factors and their receptors are altered by the mere partial IGF-1 deficiency
transcription profiling by array
Mus musculus
3
29/12/2018
-
28
-
RNA-seq of liver and pyloric caeca in salmon fry before and after initial feeding
RNA-seq of coding RNA
Salmo salar
16
29/12/2018
-
ENA
25
-
RNA-seq analysis of PROX1 overexpression and knockdown in glioblastoma cell lines
RNA-seq of coding RNA
Homo sapiens
20
29/12/2018
ENA
39
-
Whole exome sequencing of human tumours and cell lines to investigate how ERBB2 and KRAS Alterations mediate response to EGFR inhibitors in early stage Gallbladder Cancer
DNA-seq
Homo sapiens
22
29/12/2018
-
ENA
24
-
Expression profiles of mRNAs and lncRNAs regulated by let-7e in vascular endothelial cells
transcription profiling by array
Homo sapiens
6
29/12/2018
-
26
-
Whole genome sequencing of Mycobacterium tuberculosis strains resistant to D-cycloserine
DNA-seq
Mycobacterium tuberculosis
12
28/12/2018
-
ENA
32
-
Gene expression microarray analysis of ZR75-1 human breast cancer cells ectopically expressing wild-type or mutant GATA3
transcription profiling by array
Homo sapiens
12
27/12/2018
-
29
-
ChIP-seq of H3K4me1, me2 and me3 on mouse salivary gland cancer cells cultured in either adherent or non-adherent conditions
ChIP-seq
Mus musculus
22
24/12/2018
-
ENA
53
-
mRNA-seq of mouse salivary gland cancer cells cultured in adherent or non-adherent culture
RNA-seq of coding RNA
Mus musculus
6
24/12/2018
ENA
48
-
Transcription profiling by array to investigate dose-dependent effects of human recombinant CCL25 on porcine chondrocytes isolated from 3D micromasses
transcription profiling by array
Sus scrofa
7
24/12/2018
-
32
-
Effects of anti-androgenic compounds on zebrafish insulin mutants
RNA-seq of coding RNA
Danio rerio
6
21/12/2018
-
ENA
52
-
Single cell RNA-sequencing of primary mouse Neural Plate Border Stem Cells
RNA-seq of coding RNA from single cells
Mus Musculus
96
20/12/2018
ENA
113
-
Single cell RNA-sequencing of E8.5 stage embryonic neural tissue from mouse
RNA-seq of coding RNA from single cells
Mus musculus
191
20/12/2018
ENA
62
-
Single cell RNA-sequencing of induced Neural Plate Border Stem Cells
RNA-seq of coding RNA from single cells
Homo sapiens
336
20/12/2018
ENA
82
-
Transcriptional profiling of neonatal cord blood from babies born with or without prolonged rupture of membranes
transcription profiling by array
Homo sapiens
51
20/12/2018
59
-
DNA Methylation profiling of human iNBSCs, iPSC-derived NBSCs and adult dermal fibroblasts
methylation profiling by array
Homo sapiens
8
20/12/2018
55
-
RNA Expression profiling of primary mouse Neural Plate Border Stem Cells, differentiated progeny and biological controls
transcription profiling by array
Mus musculus
12
20/12/2018
52
-
RNA Expression profiling of human induced Neural Plate Border Stem Cells, Neural Plate Border Stem Cell progeny and biological controls
transcription profiling by array
Homo sapiens
24
20/12/2018
45
-
The core genome m5C methyltransferase JHP1050 (M.Hpy99III) plays an important role in orchestrating gene expression in Helicobacter pylori
RNA-seq of coding RNA
Helicobacter pylori
11
19/12/2018
-
ENA
45
-
RNA-sequencing for functional prediction of RNAs
RNA-seq of coding RNA from single cells
Mus musculus
598
19/12/2018
-
ENA
105
-
SRS endotype assignment of septic shock patients from the VANISH randomised trial
transcription profiling by array
Homo sapiens
176
18/12/2018
43
-
ATAC-seq for L3.6pl cells
ATAC-seq
Homo sapiens
2
18/12/2018
ENA
54
-
ChIP seq for p63, H3K27ac and BRD4 in L3.6pl, BxPC-3 pancreatic cancer cell lines and ChIP-seq of H3K27ac and BRD4 in Panc-1 pancreatic cell line
ChIP-seq
Homo sapiens
18
18/12/2018
ENA
54
-
RNA-seq of human pancreatic cell lines, L3.6pl and BxPC-3, upon knockdown of p63 for 48 hours compared to siControl
RNA-seq of coding RNA
Homo sapiens
12
18/12/2018
ENA
61
-
Bulk RNA Barcoding and sequencing (BRB-seq) protocol for RNA-seq of 60 human LCL from the 1000G project
RNA-seq of coding RNA
Homo sapiens
61
17/12/2018
-
ENA
82
-
Analysis of gene deletion induced changes in the transcriptome of human macrophage-like cells
RNA-seq of coding RNA
Homo sapiens
8
17/12/2018
ENA
58
-
Defining Gene Signatures for Protective Immunity to Tuberculosis in the Rhesus Macaque Model
transcription profiling by array
Macaca mulatta
8
16/12/2018
-
10
-
RNA-sequencing of Clostridioides difficile WT and luxS mutant both during mono-culture biofilms and co-culture biofilms with Bacteroides fragilis
RNA-seq of coding RNA
Bacteroides fragilis, Clostridioides difficile
21
16/12/2018
ENA
97
-
RNA-sequencing of WT and luxS mutant Clostridioides difficile during planktonic culture
RNA-seq of coding RNA
Clostridioides difficile
6
16/12/2018
-
ENA
67
-
Transcriptional profiling by array of ovaries from aged mice
transcription profiling by array
Mus musculus
3
15/12/2018
-
64
-
A nuclear-localized red fluorescence knock-in reporter allele for mouse pancreatic beta-cells
RNA-seq of coding RNA
Mus musculus
14
15/12/2018
-
ENA
80
-
Transcription profiling by array of adult Drosophila melanogaster with decreased expression of mitofusin (dMfn)
transcription profiling by array
Drosophila melanogaster
8
14/12/2018
-
59
-
Transcriptome of Escherichia coli O157:H7 (Sakai) in response to spinach leaf lysates by RNA-seq
RNA-seq of coding RNA
Escherichia coli
6
13/12/2018
-
ENA
64
-
Targeted DNA-seq of Human HepG2 cells following editing with CRISPR/Cas9
DNA-seq
Homo sapiens
10
13/12/2018
-
ENA
90
-
Targeted DNA-seq of Human HepG2 cells following editing with CRISPR/Cas9 upon chromatin modulation with TSA and EZH2i
DNA-seq
Homo sapiens
30
13/12/2018
-
ENA
81
-
ChIP-seq for TAZ (WWTR1) binding region in C2C12 myoblasts
ChIP-seq
Mus musculus
8
13/12/2018
ENA
48
-
A Liver Hepcidin-Intestinal HIF-2α Axis Regulates Iron Absorption During Systemic Iron Deficiency, Hypoxia and Hemochromatosis
RNA-seq of coding RNA
Mus musculus
12
12/12/2018
-
ENA
60
-
Reverse transcriptase inhibitors in Aicardi-Goutières syndrome
RNA-seq of coding RNA
Homo sapiens
28
12/12/2018
-
ENA
45
-
Wide-ranging analysis of microRNA profiles in sporadic amyotrophic lateral sclerosis using next-generation sequencing
microRNA profiling by high throughput sequencing
Homo sapiens
8
12/12/2018
-
ENA
46
-
Microarray of isolated adipocytes from subcutaneous adipose tissue of severely obese patients compared to lean controls
transcription profiling by array
Homo sapiens
24
12/12/2018
-
46
-
Transcription profiling by array of eWAT from CD1 WT and Irx5-KO mice fed a high fat diet
transcription profiling by array
Mus musculus
12
12/12/2018
-
38
-
Comprehensive transcriptome analysis of synovium and peripheral blood reveals major disease heterogeneity early in the RA disease process prior to therapeutic intervention
RNA-seq of coding RNA
Homo sapiens
154
12/12/2018
-
ENA
59
-
RNA-seq of mouse alveolar macrophages (ADAR1 deficient and WT)
RNA-seq of coding RNA
Mus musculus
2
11/12/2018
-
ENA
56
-
Transcriptome changes in the mice lumbar spinal cord after the 30-day space flight and subsequent 7-day re-adaptation on Earth
transcription profiling by array
Mus musculus
6
08/12/2018
81
-
Transcriptome profiling of human fetal small intestine epithelial cell line FHs 74 int (ATCC CCL-241) in response to human skimmed milk treatment for 12 hours
transcription profiling by array
Homo sapiens
4
07/12/2018
74
-
RNA-seq from cortex and hippocampus of mice harboring heterozygous and homozygous deletion of Kctd13, as well as wild-type controls
RNA-seq of coding RNA
Mus musculus
47
06/12/2018
ENA
82
-
The yeast GG-NER complex evicts histone H2A.Z-containing barrier nucleosomes from CID boundaries during DNA repair
ChIP-seq
Saccharomyces cerevisiae
27
06/12/2018
-
ENA
63
-
Single-cell RNAseq of Tal1 knockout chimeric mouse embryos at embryonic day 8.5 of mouse development
RNA-seq of coding RNA from single cells
Mus musculus
80
05/12/2018
ENA
73
-
Single-cell RNAseq of control chimeric mouse embryos at embryonic days 7.5 and 8.5 of mouse development
RNA-seq of coding RNA from single cells
Mus musculus
120
05/12/2018
ENA
62
-
Single-cell RNA-seq of mouse endothelial cells from three distinct embryonic locations
RNA-seq of coding RNA from single cells
Mus musculus
288
05/12/2018
-
ENA
65
-
Single-cell RNAseq of Tal1 knockout chimeric mouse embryos at embryonic days 7.5 and 8.5 of mouse development
RNA-seq of coding RNA
Mus musculus
128
05/12/2018
-
ENA
68
-
Timecourse single-cell RNAseq of whole mouse embryos harvested between days 6.5 and 8.5 of development
RNA-seq of coding RNA from single cells
Mus musculus
2560
05/12/2018
ENA
76
-
Genome-wide screen for regulators of the yeast pleiotropic drug response
genotyping by array
Saccharomyces cerevisiae S288C
72
05/12/2018
-
65
-
Gene expression microarray analysis of whole intestine from Kaiso-/- mice
transcription profiling by array
Mus musculus
6
05/12/2018
-
58
-
RNA-seq expression profiling of humain MAIT cells in blood and liver as compared to mainstream TCD4+ and TCD8+ cells
RNA-seq of coding RNA
Homo sapiens
24
03/12/2018
ENA
59
-
Microarray expression profiling of NKT and MAIT subsets in different organs of B6-MAIT/CAST mice
transcription profiling by array
Mus musculus
42
03/12/2018
65
-
Transcriptomic study of the pathogenic fungus Aspergillus fumigatus during a murine intranasal infection, using the Whole A. fumigatus Genome Expression 44K v.1 microarray (AWAFUGE)
transcription profiling by array
Aspergillus fumigatus Af293
12
03/12/2018
-
62
-
A genomic biomarker signature can predict skin sensitizers using a cell-based in vitro alternative to animal tests
transcription profiling by array
Homo sapiens
137
02/12/2018
186
-
Comprehensive RNA-Seq Profiling of the Lung Transcriptome of Bashbay Sheep in Response to Experimental Mycoplasma ovipneumoniae Infection
RNA-seq of coding RNA
Ovis aries
9
01/12/2018
-
ENA
75
-
Receptor Tyrosine Kinase pathway activation is sufficient to trigger chordoma in zebrafish
RNA-seq of coding RNA
Danio rerio
6
01/12/2018
-
ENA
55
-
RNA-seq of JAK2VF and DNMT3A mutant Myelofibrosis patients
RNA-seq of coding RNA
Homo sapiens
8
01/12/2018
ENA
72
-
MicroRNA-regulated phase change controls reproductive stem elongation (Experiment M2)
transcription profiling by array
Hordeum vulgare
28
01/12/2018
-
62
-
Survey of RNA viruses present in East African maize with symptoms of maize lethal necrosis
RNA-seq of coding RNA
Zea mays
30
01/12/2018
-
ENA
70
-
RNA-seq of zebrafish larvae fed with different diets
RNA-seq of coding RNA
Danio rerio
4
01/12/2018
-
ENA
55
-
The role of the transcription factors GATA2 and FOXA1 in immortalized basal-like prostate epithelial cells
transcription profiling by array
Homo sapiens
23
01/12/2018
-
58
-
Analysis of mouse T cell transcription profile after co-culture with BaF3 cells with or without the oncogenic point mutation JAK2 V617F
transcription profiling by array
Mus musculus
7
01/12/2018
-
44
-
Transcription profiling of human blood eosinophils in eosinophilic asthma patients compared to healthy individuals
transcription profiling by array
Homo sapiens
6
01/12/2018
57
-
Transcriptional profiling by array of fetal and maternal of mesenchymal stem cell (MSC) populations from human term placenta
transcription profiling by array
Homo sapiens
12
01/12/2018
74
-
RNA-seq of the whole retina of rat intravitreally injected with aldosterone
RNA-seq of coding RNA
Rattus norvegicus
6
30/11/2018
ENA
45
-
Corynebacterium Cell Factory Design and Culture Process Optimization for Muconic Acid Biosynthesis
RNA-seq of coding RNA
Corynebacterium glutamicum
2
30/11/2018
-
ENA
49
-
RNA-seq to investigate differential expression of serotype emm1 Streptococcus pyogenes strains S119 and S126
RNA-seq of coding RNA
Streptococcus pyogenes
12
30/11/2018
-
ENA
37
-
Transcription start site profiling of a Streptococcus pyogenes emm1 strain
RNA-seq of coding RNA
Streptococcus pyogenes
2
30/11/2018
-
ENA
38
-
Genomic encoding of transcriptional burst kinetics
RNA-seq of coding RNA from single cells
Mus musculus
480
30/11/2018
-
ENA
40
-
Inducible defense response of C. cinerea against its fungiverous nematode A. avenae in microfluidics device
RNA-seq of coding RNA
Coprinopsis cinerea
12
30/11/2018
ENA
42
-
RNA-seq of mid-gestation mouse mammary tissues from E12.5 stage organs
RNA-seq of coding RNA
Mus musculus
24
30/11/2018
-
ENA
35
-
RNA-seq of embryonic mammary progenitor cell lines (part A)
RNA-seq of coding RNA
Mus musculus
46
30/11/2018
-
ENA
47
-
Embryonic mouse mammary progenitor cells +/-Sox9
RNA-seq of coding RNA
Mus musculus
12
30/11/2018
-
ENA
35
-
Opposing Role of Dpf2 and Eed on Differentiation of Mouse Embryonic Stem Cells via Regulating Tbx3 (4C)
4C
Mus musculus
4
30/11/2018
-
ENA
30
-
Opposing Role of Dpf2 and Eed on Differentiation of Mouse Embryonic Stem Cells via Regulating Tbx3 (RNA-seq)
RNA-seq of coding RNA
Mus musculus
4
30/11/2018
-
ENA
40
-
Role of Anlotinib-induced CCL2 decrease in anti-angiogensis and response prediction for Non-Small Cell Lung Cancer therapy
RNA-seq of coding RNA
Homo sapiens
4
30/11/2018
-
ENA
32
-
Low input Hi-C datasets for a diffuse large B-cell lymphoma sample, healthy control human B-cells and mouse embryonic stem cells
Hi-C
Homo sapiens, Mus musculus
16
30/11/2018
ENA
264
-
Investigating epigenetic effects of activation-induced deaminase in chronic lymphocytic leukemia
methylation profiling by array
Homo sapiens
16
29/11/2018
38
-
Single-cell RNA-seq of mouse developing spinal cord
RNA-seq of coding RNA from single cells
Mus musculus
23
29/11/2018
ENA
27
-
RNA-Seq of full-length RNA from worker and royal jelly of honey bees (Apis mellifera)
RNA-seq of non coding RNA
Apis mellifera
6
29/11/2018
-
ENA
25
-
Response of Escherichia coli after Phage T4 Ghost Adsorption
transcription profiling by array
Escherichia coli K-12
8
29/11/2018
-
16
-
Methylation profiling of human trophoblast organoids providing a model for maternal-fetal interactions in early pregnancy and placenta tissue for comparison
methylation profiling by array
Homo sapiens
18
28/11/2018
-
38
-
Comparison of the gene expression profile of a wild type Pseudo-nitzschia multistriata strain and a strain displaying sex reversal
RNA-seq of coding RNA
Pseudo-nitzschia multistriata
4
28/11/2018
-
ENA
27
-
Transcriptomic profile of human placenta derived trophoblast organoid cultures with its tissue of origin, human placental villi
transcription profiling by array
Homo sapiens
18
28/11/2018
78
-
RNA sequencing of Mus musculus T helper cell type 2 with retroviral overexpression of different genes
RNA-seq of coding RNA
Mus musculus
156
27/11/2018
-
ENA
33
-
RNA-seq of the prototrophic non-hyphal smooth-33 mutant (FKP514) and its prototrophic control strain (FKP391)
RNA-seq of coding RNA
Yarrowia lipolytica
5
26/11/2018
-
ENA
31
-
Transcriptomic profiles of two sponge species upon exposure to microbial-associated molecular patterns (lipopolysaccharide and peptidoglycan) compared against control (sterile artificial seawater)
RNA-seq of coding RNA
Aplysina aerophoba, Dysidea avara
35
26/11/2018
ENA
37
-
Transcription profiling of colon mucosa from HLAB27 transgenic rats fed extra-virgin olive oil rich in polyphenols
transcription profiling by array
Rattus norvegicus
3
26/11/2018
-
20
-
Sparse feature selection methods identify unexpected global cellular response to strontium-containing materials
transcription profiling by array
Homo sapiens
75
25/11/2018
40
-
RNA-seq of 36 individuals with autism spectrum disorder
RNA-seq of coding RNA
Homo sapiens
36
25/11/2018
ENA
45
-
ChIP-seq of Mus musculus T helper cell type 2 with retroviral overexpression of Bhlhe40 and Pparg
ChIP-seq
Mus musculus
4
23/11/2018
-
ENA
49
-
Opposing Role of Dpf2 and Eed on Differentiation of Mouse Embryonic Stem Cells via Regulating Tbx3 (ChIP-seq)
ChIP-seq
Mus musculus
39
23/11/2018
-
ENA
37
-
RNA-Seq of Danionine species
RNA-seq of coding RNA
Danio aesculapii, Danio albolineatus, Danio rerio
13
22/11/2018
-
ENA
4
-
ChIP-seq of beta-catenin in TCF/LEF or beta-cetenin knockout HEK293T cells to study TCF/LEF dependent and independent regulation of Wnt/beta-catenin transcription
ChIP-seq
Homo sapiens
13
22/11/2018
-
ENA
38
-
Bisulphite-seq to investigate the proto CpG island methylator phenotype of sessile serrated adenoma/polyps
Bisulfite-seq
Homo sapiens
62
22/11/2018
-
ENA
46
-
RNA-seq to investigate the proto CpG island methylator phenotype of sessile serrated adenoma/polyps
RNA-seq of coding RNA
Homo sapiens
62
22/11/2018
-
ENA
45
-
Bisulphite-seq to investigate the proto CpG island methylator phenotype of sessile serrated adenoma/polyps, dataset 2
Bisulfite-seq
Homo sapiens
12
22/11/2018
-
ENA
37
-
RNA-seq expression profiling upon DDX3X or DDX54 knockdown in human breast cancer MCF7 cells
RNA-seq of coding RNA
Homo sapiens
15
21/11/2018
-
ENA
72
-
iCLIP of DDX3X and DDX54 in human breast cancer MCF7 cells
CLIP-seq
Homo sapiens
6
21/11/2018
-
ENA
47
-
Transcription profiling of fibroblasts from a Friedreich Ataxia patient to identify genes involved in Friedreich Ataxia pathophysiology
transcription profiling by array
Homo sapiens
6
21/11/2018
-
42
-
Transcription profiling by array of rat experimental tumours to study the effects of dietary lipids
transcription profiling by array
Rattus norvegicus
30
21/11/2018
-
47
-
Microarray of Saccharomyces cerevisiae grown by inoculation into 2nM rapamycin against untreated cultures
transcription profiling by array
Saccharomyces cerevisiae
16
20/11/2018
-
43
-
Transcriptional profiling of long-term stimulated primary murine intestinal fibroblasts with interleukin-36
RNA-seq of coding RNA
Mus musculus
6
19/11/2018
-
ENA
40
-
Identifying the fitness cost of rifampicin-resistance in Mycobacterium tuberculosis through RNAseq profiling
RNA-seq of coding RNA
Mycobacterium tuberculosis
36
18/11/2018
ENA
49
-
ChIP-chip of primary hippocampal neurons treated with lead against non-treated controls
transcription profiling by array
Rattus norvegicus
6
17/11/2018
-
54
-
RNA-seq comparison of fetal lung and cultured fetal lung derived organoids with pluripotent stem cell derived lung organoids
RNA-seq of coding RNA
Homo sapiens
31
17/11/2018
-
ENA
56
-
Transcriptomics study on the effect of alternative oxidase expression in Bcs1l mutant (S78G) mice (Mus musculus)
RNA-seq of coding RNA
Mus musculus
288
16/11/2018
-
ENA
76
-
Gene expression profiling of patients from the Danish Center for Translational Breast Cancer Research program
transcription profiling by array
Homo sapiens
94
16/11/2018
50
-
Single-cell transcriptional analysis reveals ILC-like cells in zebrafish
RNA-seq of coding RNA from single cells
Danio rerio
4
16/11/2018
-
ENA
43
-
Single-cell transcriptional analysis reveals innate lymphoid cell (ILC)-like cells in zebrafish
RNA-seq of coding RNA from single cells
Danio rerio
1056
16/11/2018
-
ENA
59
-
Transcription profiling by array to investigate susceptibility to multiple azole resistance in Candida glabrata
transcription profiling by array
[Candida] glabrata
8
16/11/2018
-
48
-
RNASeq of multiple Mycoplasma species in wild-type condition including: Mycoplasma pneumoniae, Mycoplasma genitalium, Mycoplasma hyopneumoniae, Mycoplasma capricolum, Mycoplasma gallisepticum, Mycoplasma mycoides
RNA-seq of coding RNA
Mycoplasma capricolum subsp. capricolum ATCC 27343, Mycoplasma gallisepticum str. R(high), Mycoplasma genitalium G37, Mycoplasma hyopneumoniae 168, Mycoplasma mycoides subsp. capri LC str. 95010, Mycoplasma pneumoniae M129
11
16/11/2018
-
ENA
45
-
Single-cell phenotyping and RNA sequencing reveal novel patterns of gene expression heterogeneity and regulation during growth and stress adaptation in a unicellular eukaryote
RNA-seq of coding RNA from single cells
Schizosaccharomyces pombe
2806
14/11/2018
-
ENA
46
-
The effect of micronutrient supplementation on growth and hepatic metabolism in diploid and triploid Atlantic salmon (Salmo salar) parr fed a low marine ingredient diet
transcription profiling by array
Salmo salar
36
14/11/2018
-
52
-
RNA-seq of adipose tissue from pigs divergent in feed efficiency reveals variations in adipose growth, extracellular matrix formation, lipid metabolism and immune response
RNA-seq of coding RNA
Sus scrofa
20
14/11/2018
-
ENA
41
-
MDA-MB-231/1833 bone-metastatic breast cancer cell gene expression after conditioning in conditioned medium from HUVECs conditioned in conditioned medium from static and flow-stimulated MLO-Y4 osteocytes
RNA-seq of coding RNA
Homo sapiens
8
13/11/2018
ENA
49
-
RNA-seq study on time of day specific Glucocorticoid action in mouse liver and lung tissues
RNA-seq of coding RNA
Mus musculus
32
13/11/2018
-
ENA
49
-
RNASeq data analysis of wild type and reverb alpha knockout cells from mouse liver, at different time points, with or without DEX treatment
RNA-seq of coding RNA
Mus musculus
40
13/11/2018
-
ENA
40
-
Histone H3K27ac ChIP-seq binding regions in mouse liver
ChIP-seq
Mus musculus
16
13/11/2018
ENA
39
-
ZEB1 ChIP-seq Data from Control CD8+cDC1
ChIP-seq
Mus musculus
1
13/11/2018
-
ENA
30
-
RNA-seq from ZEB1 Knockdown and Control CD8+cDC1
RNA-seq of coding RNA
Mus musculus
12
13/11/2018
-
ENA
36
-
RNA-seq of human fibroblast cell cultures treated with resveratrol against DMSO treated controls, with and without siRNA treatment targeting SIRT1
RNA-seq of coding RNA
Homo sapiens
8
12/11/2018
ENA
41
-
Selenite treatment of a Candida albicans wild type strain
transcription profiling by array
Candida albicans
32
12/11/2018
-
32
-
Selenite treatment of a Debaryomyces hansenii wild type strain
transcription profiling by array
Debaryomyces hansenii
32
12/11/2018
-
34
-
Selenite treatment of a Kluyveromyces lactis wild type strain
transcription profiling by array
Kluyveromyces lactis
32
12/11/2018
-
32
-
Selenite treatment of a Lachancea kluyveri wild type strain
transcription profiling by array
Lachancea kluyveri
32
12/11/2018
-
33
-
Selenite treatment of a Lachancea thermotolerans wild type strain
transcription profiling by array
Lachancea thermotolerans
32
12/11/2018
-
32
-
Selenite treatment of a Yarrowia lipolytica wild type strain
transcription profiling by array
Yarrowia lipolytica
32
12/11/2018
-
28
-
Transcriptome analyses of the response of C. glabrata wild type cells to iron excess, salt excess, cadmium treatment and iron starvation
transcription profiling by array
[Candida] glabrata
16
12/11/2018
-
26
-
Transcriptome analyses of a C. glabrata strain deleted for the transcription factor Aft2
transcription profiling by array
[Candida] glabrata
8
12/11/2018
-
23
-
Selenite treatment of a Candida glabrata wild type strain
transcription profiling by array
[Candida] glabrata
32
12/11/2018
-
21
-
Selenite treatment of a Saccharomyces cerevisiae wild type strain
transcription profiling by array
Saccharomyces cerevisiae
32
12/11/2018
-
21
-
RNA-seq of wild type Mycobacterium smegmatis mc2 155 (exponential and stationary phase) and Ms1 deletion strain (exponential and stationary phase)
RNA-seq of coding RNA
Mycolicibacterium smegmatis
12
12/11/2018
-
ENA
28
-
Single cell RNA-seq of mouse skin cells
RNA-seq of coding RNA from single cells
Mus musculus
2
11/11/2018
-
ENA
40
-
High content imaging in the screening of biomaterial-induced MSC behavior
transcription profiling by array
Homo sapiens
12
10/11/2018
25
-
Ribosome profiling of NEW1 knock-out of budding yeast Saccharomyces cerevisiae
RNA-seq of coding RNA
Saccharomyces cerevisiae
12
10/11/2018
-
ENA
28
-
Salicylic acid-induced gene expression in wild-type Col-0 and mutant upl3-4 Arabidopsis thaliana plants
RNA-seq of coding RNA
Arabidopsis thaliana
11
09/11/2018
-
ENA
66
-
ChIP-Seq of H3K4me3 in primary unstimulated monocyte subsets from 2 healthy donors buffy coats
ChIP-seq
Homo sapiens
12
09/11/2018
-
ENA
28
-
RNA-seq of primary human monocytes (4 healthy donors)
RNA-seq of coding RNA
Homo sapiens
8
09/11/2018
-
ENA
30
-
ChiP-seq of H3K4me3 in primary unstimulated monocytes from 3 healthy donors buffy coats and from 4 CMML patients
ChIP-seq
Homo sapiens
14
09/11/2018
ENA
32
-
Serum microRNA profiles from the Malmö Diet and Cancer Study - Cardiovascular Cohort
transcription profiling by RT-PCR
Homo sapiens
12
08/11/2018
-
29
-
Gain of chromatin loops marks the exit from naïve pluripotency – in-situ Hi-C data
Hi-C
Mus musculus
16
08/11/2018
-
ENA
42
-
Gain of chromatin loops marks the exit from naive pluripotency - ChIP seq for CTCF and Rad21
ChIP-seq
Mus musculus
12
08/11/2018
-
ENA
61
-
TCC in pluripotent and differentiated cells
DNA-seq
Mus musculus
38
08/11/2018
-
ENA
46
-
RNA-seq of Mus musculus beta cells to determine the role of the miR-200–Zeb1 axis in beta cell tumor development
RNA-seq of coding RNA
Mus musculus
22
07/11/2018
-
ENA
49
-
Transcription profiling of IGR-CaP1 prostate cancer cells resistant to docetaxel compared to non-resistant cells
transcription profiling by array
Homo sapiens
24
07/11/2018
-
40
-
Single-cell analysis of T-cells from mouse neonate thymuses in a wild type control and a placental specific isoform of Igf2 knock-down (igf2-P0)
RNA-seq of coding RNA from single cells
Mus musculus
7
06/11/2018
-
ENA
44
-
Expression profiling of 3 and 24 months mouse skeletal muscle (RNA-seq)
RNA-seq of coding RNA
Mus musculus
2
03/11/2018
-
ENA
77
-
RNA-seq of human ovarian cancer cell line OVSAHO parental and CB-5083-resistant cells
RNA-seq of coding RNA
Homo sapiens
12
02/11/2018
-
ENA
96
-
RNA-seq of TCF/LEF or beta-cetenin knockout HEK293T cells to study TCF/LEF dependent and independent regulation of Wnt/beta-catenin transcription
RNA-seq of coding RNA
Homo sapiens
18
02/11/2018
-
ENA
45
-
Herbal formula YYJD induces lung cancer cell apoptosis via activation of EGR1 (RNA-seq)
RNA-seq of coding RNA
Homo sapiens
3
01/11/2018
-
ENA
119
-
Herbal formula YYJD induces lung cancer cell apoptosis via activation of EGR1
ChIP-seq
Homo sapiens
2
01/11/2018
-
ENA
94
-
Single-cell RNA sequencing of marmoset embryonic development
RNA-seq of coding RNA
Callithrix jacchus
196
01/11/2018
-
ENA
95
-
Microarray gene expression analysis of human melanoma A375 cells treated with 0.5mM phenformin against untreated control
transcription profiling by array
Homo sapiens
4
01/11/2018
-
73
-
Microarray gene expression analysis of human melanoma A375 cells resistant to 0.5mM phenformin against sensitive naive cells
transcription profiling by array
Homo sapiens
4
01/11/2018
-
68
-
RNA-Seq of control, RNPS1 knockdown and rescue in HeLa cells
RNA-seq of coding RNA
Homo sapiens
12
01/11/2018
-
ENA
99
-
Investigation of placental DNA methylation in obese women exposed to Metformin during pregnancy
methylation profiling by array
Homo sapiens
213
01/11/2018
-
55
-
RNA-seq of response to heat stress and lipopolysaccharide in the thymic transcriptome of chicken broiler and fayoumi lines
RNA-seq of coding RNA
Gallus gallus
31
01/11/2018
-
ENA
74
-
Combined transcriptome analysis and polysome profiling of Streptomyces coelicolor MT1110 in SMMS
transcription profiling by array
Streptomyces coelicolor A3(2)
29
01/11/2018
-
50
-
Transcription profiling under heat stress of transgenic Arabidopsis lines in which expression of BPMs were suppressed by an amiRNA
transcription profiling by array
Arabidopsis thaliana
4
01/11/2018
-
51
-
Transcription profiling by array of mesometrial poles of implantation chamber from gestation day 10.5 beta-2-microglobulin knockout mice and wild-type controls
transcription profiling by array
Mus musculus
6
01/11/2018
55
-
Fine control of nuclear confinement identifies a threshold deformation leading to lamina rupture and induction of specific genes
transcription profiling by array
Homo sapiens
4
31/10/2018
66
-
Surface topography guides morphology and spatial patterning of induced pluripotent stem cell colonies
transcription profiling by array
Homo sapiens
12
31/10/2018
47
-
Generation of progesterone-responsive endometrial fibroblasts from human induced pluripotent stem cells: role of the WNT/CTNNB1 pathway
RNA-seq of coding RNA
Homo sapiens
27
31/10/2018
ENA
72
-
Identification of Elg1 interaction partners and effects on post-replication chromatin re-formation
MNase-seq, ChIP-seq
Saccharomyces cerevisiae
38
31/10/2018
-
ENA
52
-
Gene expression profiling of human germ cell cancer
transcription profiling by array
Homo sapiens
34
31/10/2018
-
69
-
Microarray of laser capture microdissected Paneth cells from Atg16l1 T300A and wildtype littermates mice that were either exposed or not with mainstream cigarette smoking for 6 weeks
transcription profiling by array
Mus musculus
32
31/10/2018
-
36
-
16S rRNA sequencing of fecal samples from Atg16l1 T300A and wildtype littermate mice that were exposed to mainstream cigarette smoking co-housed with mice from the same genotype but not exposed to cigarette smoking
DNA-seq
mouse gut metagenome
39
31/10/2018
ENA
59
-
16S rRNA sequencing of fecal samples from Atg16l1 T300A and wildtype littermate mice that were either exposed or not to mainstream cigarette smoking for 6 weeks
DNA-seq
mouse gut metagenome
29
31/10/2018
ENA
48
-
RNA-seq of full thickness small intestine from Atg16l1 T300A and wildtype littermate mice that were either exposed or not with mainstream cigarette smoking for 6 weeks
RNA-seq of coding RNA
Mus musculus
15
31/10/2018
ENA
54
-
Microarray comparison of NK cell from healthy donors and day 14 post stem cell transplantation
transcription profiling by array
Homo sapiens
9
31/10/2018
-
52
-
Transcriptional changes in murine keratinocyte harbouring heterozygous or homozygous R245W p53 mutation in vitro
transcription profiling by array
Mus musculus
24
31/10/2018
-
75
-
Transcription profiling by array of lymphocytes from BRCA1-mutation carriers and controls in response to irradiation
transcription profiling by array
Homo sapiens
36
31/10/2018
-
56
-
Transcriptional Profiling of Human Airway Smooth muscle cells from subjects with and without asthma-effects of mimicking viral challenge
transcription profiling by array
Homo sapiens
18
29/10/2018
4
-
Exome-seq of Jak2VF erythroid progenitors cells transduced with Dnmt3a-Cas9-GFP lentivirus vs. emp-Cas9-GFP controls 17 weeks post transplantation
DNA-seq
Mus musculus
8
29/10/2018
-
ENA
38
-
RNAseq analysis of IKKbeta knockdown EDC4 knockdown irradiated and untreated
RNA-seq of coding RNA
Homo sapiens
16
29/10/2018
ENA
59
-
Single-cell RNA-seq on Drisophila melanogaster wild type third instar eye discs
RNA-seq of coding RNA from single cells
Drosophila melanogaster
11
29/10/2018
ENA
33
-
RNA-seq in GR18 cell line to identify genes regulated by the Glucocorticoid Receptor
RNA-seq of coding RNA
Homo sapiens
6
29/10/2018
ENA
51
-
synSTARR-seq with Glucocorticoid Receptor synthetic binding sites in GR18 cell line
RNA-seq of coding RNA
Homo sapiens
12
29/10/2018
ENA
44
-
ATAC-seq of Jak2VF LSK cells transduced with Dnmt3a-Cas9-GFP lentivirus vs. emp-Cas9-GFP controls 8 weeks post transplantation
ATAC-seq
Mus musculus
16
29/10/2018
ENA
34
-
RNA-seq of Jak2VF LSK cells transduced with Dnmt3a-Cas9-GFP lentivirus vs. emp-Cas9-GFP controls 8 weeks post transplantation
RNA-seq of coding RNA
Mus musculus
28
29/10/2018
ENA
31
-
RNA-seq of Jak2VF LSK cells transduced with Dnmt3a-Cas9-GFP lentivirus vs. emp-Cas9-GFP controls one week and five weeks post methylcellulose plating
RNA-seq of coding RNA
Mus musculus
36
29/10/2018
-
ENA
35
-
RNA-seq of total royal jelly and MRJP-3-bound RNA
RNA-seq of coding RNA
Apis mellifera
5
28/10/2018
-
ENA
31
-
Transcriptional Profiling of cultured human airway smooth cells from subjects with and without asthma
transcription profiling by array
Homo sapiens
11
27/10/2018
46
-
RNA-seq of primary mouse monocytes from miR-150 knockout and Tet3 knockout mice compared to wild type controls
RNA-seq of coding RNA
Mus musculus
22
26/10/2018
-
ENA
37
-
Genome-wide maps of nuclear lamina interactions in HeLa cells identified using MethylAdenine IDentification (MadID)
MeDIP-seq
Homo sapiens
6
26/10/2018
ENA
97
-
RNA-seq from soleus muscle of NO66-/- and NO66F/F mice
RNA-seq of coding RNA
Mus musculus
2
25/10/2018
ENA
33
-
Drop-seq analysis of bleomycin-treated and control mouse lung single-cell suspensions
RNA-seq of coding RNA from single cells
Mus musculus
10
25/10/2018
ENA
41
-
SLIC-CAGE (Super-Low Input Carrier-CAGE) application on mouse primordial germ cells isolated from embryonic day E11.5
RNA-seq of coding RNA
Mus musculus
6
25/10/2018
-
ENA
35
-
SLIC-CAGE (Super-Low Input Carrier-CAGE) development: comparison with Saccharomyces cerevisiae nAnTi-CAGE and nanoCAGE libraries and validation of SLIC-CAGE on Mus musculus total RNA
RNA-seq of coding RNA
Mus musculus, Saccharomyces cerevisiae S288C
35
25/10/2018
-
ENA
33
-
RNA-seq of human cancer cell line OVCA420* following TIGAR knockdown with shRNA
RNA-seq of coding RNA
Homo sapiens
6
24/10/2018
-
ENA
60
-
Gene expression microarray analysis of lncRNA TCAM1P-004-knockdown or RP11-598D14.1-knockdown in MIHA cells
transcription profiling by array
Homo sapiens
3
24/10/2018
-
62
-
RNA-Seq of human fetal hearts at 9, 12 and 16 weeks of gestation
RNA-seq of coding RNA
Homo sapiens
9
24/10/2018
-
ENA
66
-
CAGE on Drosophila mesodermal and whole embryo samples
RNA-seq of coding RNA
Drosophila melanogaster
6
24/10/2018
-
ENA
48
-
Total and nuclear RNA-seq of whole-embryo and mesodermal cells
RNA-seq of coding RNA
Drosophila melanogaster
11
24/10/2018
-
ENA
45
-
DNA-methylation profiling of human induced pluripotent stem cell -derived intestinal epithelial organoids
methylation profiling by array
Homo sapiens
6
23/10/2018
-
55
-
RNA-seq of mouse hypothalamus to investigate effect of high vs low fat diet
RNA-seq of coding RNA
Mus musculus
16
23/10/2018
ENA
50
-
Rpd3L HDAC links H3K4me3 to transcriptional repression memory
RNA-seq of coding RNA
Saccharomyces cerevisiae
16
23/10/2018
-
ENA
57
-
Microarray of iPSC-derived macrophages generated in a bioreactor process compared to PBMC-derived macrophages and exposed to P. aeruginosa
transcription profiling by array
Homo sapiens
10
23/10/2018
-
61
-
RNA-sequencing of human induced pluripotent stem cell-derived intestinal epithelial organoids
RNA-seq of coding RNA
Homo sapiens
4
22/10/2018
-
ENA
53
-
Regional CNS immune fingerprint in chronic peripheral inflammation
RNA-seq of coding RNA
Mus musculus
34
22/10/2018
-
ENA
52
-
mRNA-seq of HCT116 RNF40 knockdown cells upon TNF-alpha stimulation
RNA-seq of coding RNA
Homo sapiens
12
22/10/2018
ENA
62
-
DNA- and RNA-seq to study the impact of 5-formylcytosine on nucleosome organization and gene expression in embryonic mouse tissues and stem cells
MNase-seq, ChIP-seq, DNA-seq, RNA-seq of coding RNA
Mus musculus, synthetic construct
150
22/10/2018
-
ENA
50
-
RNA-seq of the human breast cancer ERα-suppressed MCF-7(MCF-7/SP10+) cells and of their internal control MCF-7 (MCF-7/C) cells
RNA-seq of coding RNA
Homo sapiens
6
22/10/2018
-
ENA
69
-
Transcription profiling of Populus x canescens developing and mature xylem under short-days and drought stress treatment
RNA-seq of coding RNA
Populus tremula x Populus alba
32
21/10/2018
-
ENA
55
-
DNA methylation of longitudinal samples from The Swedish Adoption/Twin Study of Aging (SATSA)
methylation profiling by array
Homo sapiens
2144
20/10/2018
-
78
-
Microarray analysis comparing zebrafish insulin knockout mutants to non homozygous controls
transcription profiling by array
Danio rerio
2
20/10/2018
-
71
-
Transcription profiling by array to identify Sex-Specific Transcriptome Responses to Polychlorinated Biphenyls (PCBs)
transcription profiling by array
Homo sapiens
232
20/10/2018
87
-
Whole-exome sequencing of genomic DNA extracted from patient-derived melanoma cell lines resistant to vemurafenib (PLX) or trametinib (TRA)
DNA-seq
Homo sapiens
7
20/10/2018
ENA
87
-
Transcription profiling by array of HPV16-positive OPSCC samples from human donors
transcription profiling by array
Homo sapiens
33
20/10/2018
102
-
Human primary adipose-derived stem cells (hpASC) differentiated to white adipocytes stimulated with norepinephrine 3h
RNA-seq of coding RNA
Homo sapiens
8
20/10/2018
-
ENA
61
-
Differential regulation of SGK1 by progesterone activates AP-1/NDRG1 genomic axis in PR-positive and negative breast cancer cells
transcription profiling by array
Homo sapiens
18
19/10/2018
90
-
Ribo-Seq transcriptomic analysis of human RD cells infected with enterovirus strains EV7, EV71, and PV1
RNA-seq of coding RNA
Homo sapiens
12
19/10/2018
-
ENA
109
-
ChIP-seq for H3K27ac and H3K27me3 histone marks in B lymphoblasts derived from control donors or patients with loss of function mutations in TTC7A
ChIP-seq
Homo sapiens
18
19/10/2018
-
ENA
54
-
ChIP-seq for TTC7A binding to chromatin in B lymphoblasts derived from control donors
ChIP-seq
Homo sapiens
3
19/10/2018
-
ENA
67
-
Periosteum contains skeletal stem cells with high bone regenerative potential controlled by Periostin
transcription profiling by array
Mus musculus
16
18/10/2018
-
61
-
Reconstructing the human first trimester fetal-maternal interface using single cell transcriptomics - whole genome sequencing
genotyping by high throughput sequencing
Homo sapiens
54
17/10/2018
-
ENA
134
-
Single cell sequencing of iPSC-dopamine neurons reconstructs disease progression and identifies HDAC4 as a regulator of Parkinson cell phenotypes
RNA-seq of coding RNA from single cells
Homo sapiens
568
17/10/2018
-
ENA
90
-
ChIP-seq of Pbx1, Prep1 and Sp2 in WT MEFs, Sp2ko MEFs and in Sp2ko MEFs ectopically expressing Flag-tagged full length Sp2; and ChIPexo of Sp2 in WT and Sp2ko MEFs
ChIP-seq
Mus musculus
9
17/10/2018
-
ENA
73
-
Transcription profiling of Spunta WT and SP6Aox leaves under warm temperatures
transcription profiling by array
Solanum tuberosum
12
17/10/2018
-
73
-
Reconstructing the human first trimester fetal-maternal interface using single cell transcriptomics - Smartseq 2 data
RNA-seq of coding RNA
Homo sapiens
7597
17/10/2018
ENA
148
-
Transcription profiling by array of Andigena SP5G RNAi leaves, tubers and tuber sprouts
transcription profiling by array
Solanum tuberosum
16
17/10/2018
-
58
-
mRNA expression changes in chicken livers associated with field exposure to DDTs in KwaZulu-Natal, South Africa
transcription profiling by array
Gallus gallus
2
16/10/2018
67
-
Structural and non-structural genes contribute to the genetic diversity of RNA viruses
RNA-seq of coding RNA
Yellow fever virus
16
16/10/2018
-
ENA
88
-
ChIP-seq of neuroblastoma IMR-32, CLB-GA, NGP, IMR-5/75, GI-M-EN, CHP-212, and IMR-5 cell lines to identify TBX2, MYCN, H3K27ac, H3K4me1 and H3K4me3 binding sites
ChIP-seq
Homo sapiens
66
16/10/2018
ENA
113
-
RNA-seq of estrogen (E2) induced changes of mRNA expression in Sus scrofa male and female blastocysts derived from embryonic day 10
RNA-seq of coding RNA
Sus scrofa
36
16/10/2018
ENA
64
-
RNA-seq of estrogen (E2) induced changes of mRNA expression in early pregnant Sus scrofa endometrium
RNA-seq of coding RNA
Sus scrofa
16
16/10/2018
ENA
71
-
mRNAseq of Drosophila S2 cells after knockdown of EJC components
RNA-seq of coding RNA
Drosophila melanogaster
9
15/10/2018
-
ENA
74
-
Transcriptional profiling of autophagy proficient and compromised cell lines, determined by expression levels of Atg5
transcription profiling by array
Mus musculus
6
15/10/2018
-
87
-
DNA-seq of Sus scrofa psoas major muscle tissue to investigate functional dissection of QTL-region affecting fat-deposition
DNA-seq
Sus scrofa
32
15/10/2018
ENA
241
-
PRPF8 iCLIP on HeLa cells in response to eIF4A3 Knockdown
CLIP-seq
Homo sapiens
8
14/10/2018
-
ENA
80
-
Chip-seq to identify HrdB regulated genes in Streptomyces coelicolor
ChIP-seq
Streptomyces coelicolor A3(2)
5
14/10/2018
-
ENA
68
-
Nus factors prevent premature transcription termination of bacterial CRISPR arrays
ChIP-seq
Salmonella enterica subsp. enterica serovar Typhimurium
28
13/10/2018
-
ENA
87
-
RNA-seq analysis of HeLa cells treated with GapmeR antisense oligonucleotides
RNA-seq of coding RNA
Homo sapiens
2
12/10/2018
-
ENA
82
-
Genome-wide ChIP seq analysis of Aspergillus nidulans reveals deregulation of fungal nitrogen metabolism triggered by Streptomyces rapamycinicus
ChIP-seq
Aspergillus nidulans
19
12/10/2018
ENA
72
-
RNA-seq for identifying toxin MazF and MqsR cleavage sites in toxin expression and subsequent recovery cultures of Escherichia coli (mRNA and ncRNA excluding rRNA)
RNA-seq of coding RNA
Escherichia coli K-12
10
11/10/2018
ENA
85
-
Gene expression assessed by microarrays in smoothhead sculpin, sailfin sculpin and Pacific Staghorn sculpin exposed to hypoxia over time
transcription profiling by array
Artedius lateralis, Leptocottus armatus, Nautichthys oculofasciatus
98
11/10/2018
-
67
-
A simple and robust plate-based single-cell ATAC-seq on various tissues and cell lines
ATAC-seq
Homo sapiens, Mus musculus, mixed sample
7104
10/10/2018
-
ENA
120
-
RNA-seq of muscle from pigs divergent in feed efficiency and product quality
RNA-seq of coding RNA
Sus scrofa
20
10/10/2018
-
ENA
79
-
RNA-Seq study of lipid regulation in Aphis gossypii parasitized by Lysiphlebia japonica
RNA-seq of coding RNA
Aphis gossypii
6
10/10/2018
-
ENA
56
-
RNA-Seq study of 3-days larva and pupa in Lysiphlebia japonica
RNA-seq of coding RNA
Lysiphlebia japonica
6
10/10/2018
-
ENA
70
-
Bulk RNA-Seq of whole testis sampled from juvenile mice
RNA-seq of coding RNA
Mus musculus
90
09/10/2018
ENA
75
-
Whole-genome sequencing of the 5T and 5T33 murine models for multiple myeloma
DNA-seq
Mus musculus
7
09/10/2018
-
ENA
80
-
Whole-exome sequencing of the 5T and 5T33 murine models for multiple myeloma
DNA-seq
Mus musculus
7
09/10/2018
-
ENA
56
-
RNA-seq of 5 populations from the regenerative region of the brain of young and old mice
RNA-seq of coding RNA
Mus musculus
40
08/10/2018
-
ENA
82
-
Global transcriptional response of a Bordetella bronchiseptica Bvg- phase-locked mutant (delta_bvgS) after exposure to blood
transcription profiling by array
Bordetella bronchiseptica
3
07/10/2018
58
-
Global transcriptional response of Bordetella bronchiseptica after exposure to serum
transcription profiling by array
Bordetella bronchiseptica
3
07/10/2018
49
-
Global transcriptional response of Bordetella bronchiseptica after exposure to blood
transcription profiling by array
Bordetella bronchiseptica
3
07/10/2018
55
-
Time course ChIP-seq analysis of the human GM12878 lymphoblasts upon Sendai Virus infection
ChIP-seq
Homo sapiens
10
07/10/2018
-
ENA
63
-
Time course GRO-seq analysis of the human GM12878 lymphoblasts upon Sendai Virus infection
GRO-seq
Homo sapiens
12
07/10/2018
-
ENA
62
-
Pro-osteogenic trophic effects by PKA activation in human mesenchymal stromal cells
transcription profiling by array
Homo sapiens
12
06/10/2018
64
-
A calcium-induced signaling cascade leading to osteogenic differentiation of human bone marrow-derived mesenchymal stromal cells
transcription profiling by array
Homo sapiens
6
06/10/2018
67
-
Overexpression of spliced XBP1 in in vitro Th2 cells, and comparison to 4u8c treatment
RNA-seq of coding RNA
Mus musculus
30
06/10/2018
-
ENA
55
-
The IRE1a-XBP1 pathway promotes T helper cell differentiation by resolving secretory stress and accelerating proliferation (ChIP-seq)
ChIP-seq
Mus musculus
8
06/10/2018
-
ENA
70
-
Single cell sequencing of 43,168 cells during the differentiation from human induced pluripotent stem cells to cardiomyocytes
RNA-seq of coding RNA from single cells
Homo sapiens
10
06/10/2018
-
77
-
Transcription profiling by array of MG-63 cells grown on different biomaterials used in bone grafts
transcription profiling by array
Homo sapiens
69
05/10/2018
70
-
RNA-seq of group 1 Innate Lymphoid Cells (ILCs) in the mouse uterus and liver
RNA-seq of coding RNA
Mus musculus
13
05/10/2018
-
ENA
50
-
Predicting the therapeutic efficacy of MSC in bone tissue engineering using the molecular marker CADM1
transcription profiling by array
Homo sapiens
72
04/10/2018
45
-
A small molecule approach to engineering vascularized tissue
transcription profiling by array
Homo sapiens
23
04/10/2018
48
-
Zygotic expression after parental early life stress
RNA-seq of coding RNA
Mus musculus
16
03/10/2018
-
ENA
64
-
4-cell embryonic expression after zygotic injection with fragmented sperm long RNA of mice exposed to early life stress
RNA-seq of coding RNA
Mus musculus
8
03/10/2018
-
ENA
61
-
Transcription profiling by array of rat microglial cells grown in C6 glioma cell conditioned media compared to untreated controls at 6, 24 and 48 hours
transcription profiling by array
Rattus norvegicus
12
03/10/2018
-
76
-
Total RNA-seq of Black6/C57 adult mouse sperm including either exposed to early life stress or control conditions
RNA-seq of coding RNA
Mus musculus
11
03/10/2018
-
ENA
56
-
H3K27ac ChIP-Seq of pancreatic islets derived from mice fed a long-term high-fat diet (HFD) against chow-fed controls
ChIP-seq
Mus musculus
2
02/10/2018
ENA
62
-
RNA-Seq of pancreatic islets derived from mice fed a long-term high-fat diet against chow-fed controls
RNA-seq of coding RNA
Mus musculus
2
02/10/2018
ENA
72
-
Reconstructing the human first trimester fetal-maternal interface using single cell transcriptomics - 10x data
RNA-seq of coding RNA
Homo sapiens
31
02/10/2018
ENA
158
-
Transcription profiling by array of palate from mouse embryos expressing activated Smoothened to study the role of Shh signalling during secondary palate development
transcription profiling by array
Mus musculus
6
02/10/2018
51
-
A Transcript and Metabolite Atlas of Blackcurrant Fruit Development Highlights Hormonal Regulation and Reveals the Role of Key Transcription Factors
transcription profiling by array
Ribes nigrum
18
01/10/2018
-
53
-
RNA-sequencing of the mRNA transcriptome in blood, across three time-points in severe psoriasis patients treated with the tumor necrosis factor (TNF) inhibitor, etanercept
RNA-seq of coding RNA
Homo sapiens
30
01/10/2018
ENA
77
-
Transcription profiling by array of pre-cancerous lesions and tumours formed by subcutaneous injection of mtDNA depleted (rho0) 4T1 cells into BALB/c mice recovered at different time points
transcription profiling by array
Mus musculus
24
01/10/2018
-
79
-
Single-cell ATAC-seq of a mixture of three oesophageal tissue (HET1A, OE33, OE19) derived cell lines
ATAC-seq
Homo sapiens
192
01/10/2018
-
ENA
75
-
Response of several cell lines originated from liver, skin and colon to stimulation by IFNg, hyper-IL6, IL27 and OSM, investigated at mRNA level
transcription profiling by array
Homo sapiens
86
01/10/2018
-
84
-
RNA-seq of Streptococcus equi strains with and without csrRS SNPs
RNA-seq of coding RNA
Streptococcus equi
33
01/10/2018
-
ENA
44
-
Mycobacterial tuberculosis infection in hypoxia-inducible factor-1alpha deficient macrophages
transcription profiling by array
Mus musculus
2
30/09/2018
-
47
-
RNA-seq of med14-3 and uvh6-3 mutants in heat stress (37°C) and control stress (23°C), with WT controls. RNA-seq of double mutants: med14-3 or uvh6-3 combined with either ddm1-2 or mom1-2 mutants. Bisulfite-seq of WT samples subjected to control or heat stress. Bisulfite-seq of med14-3 and WT samples in control stress
RNA-seq of coding RNA
Arabidopsis thaliana
22
30/09/2018
-
ENA
58
-
RNA-seq analysis of Coprinopsis cinerea mycelium challenged with gram negative and gram positive bacteria
RNA-seq of coding RNA
Coprinopsis cinerea
9
30/09/2018
ENA
47
-
BRAFV600E FRO cells treated with BRAF inhibitor (vemurafenib) for 4, 15, 24 h
transcription profiling by array
Homo sapiens
12
30/09/2018
109
-
In vivo cleavage rules and target repertoire of RNase III in Escherichia coli
RNA-seq of coding RNA, RNA-seq of non coding RNA
Escherichia coli str. K-12 substr. MG1655
37
30/09/2018
-
ENA
57
-
Single-cell RNA-seq of mouse embryonic stem cells to study the genomic encoding of transcriptional burst kinetics
RNA-seq of coding RNA from single cells
Mus musculus
609
30/09/2018
ENA
62
-
Transcription profiling by array to investigate effect of repeated cigarette exposure on three-dimensional human bronchial epithelial cultures
transcription profiling by array
Homo sapiens
12
30/09/2018
-
78
-
RNA-Seq of neuroblastoma Th-MYCN mouse model, samples sensitive to chemotherapy, and those with chemotherapy resistance
RNA-seq of coding RNA
Mus musculus
9
30/09/2018
-
ENA
68
-
Transcription profiling by array of Anopheles gambiae: Tiassale following Met knockdown by RNA interference
transcription profiling by array
Anopheles gambiae
5
30/09/2018
-
54
-
miRNA profiling of sarcoidosis Treg cells
microRNA profiling by array
Homo sapiens
27
29/09/2018
-
50
-
RNA seq experiment of Treg cells isolated from peripheral blood of patients with pulmonary sarcoidosis compared to Treg cells from peripheral blood of healthy individuals
RNA-seq of coding RNA
Homo sapiens
12
29/09/2018
-
ENA
44
-
The effect of cold and hydrogen peroxide in wheat
transcription profiling by array
Triticum aestivum
24
28/09/2018
-
81
-
High resolution SNP-Array analysis in a Chronic lymphocytic leukemia (CLL) patient
genotyping by array
Homo sapiens
1
28/09/2018
-
105
-
Whole exome sequencing and transcription profiling of a patient cohort of oral cavity squamous cell carcinomas
DNA-seq, RNA-seq of coding RNA
Homo sapiens
86
28/09/2018
-
ENA
237
-
Single-cell RNA-seq profiling of Drosphila melanogaster Rbf mutant third intsar eye discs
RNA-seq of coding RNA from single cells
Drosophila melanogaster
10
27/09/2018
ENA
60
-
Dietary cholesterol promotes fatty liver-associated liver cancer by inducing aberrant genomic expression and mutations
transcription profiling by array
Mus musculus
8
27/09/2018
-
116
-
ChIP-Seq mapping of histone modifications at multiple DNA Double Strand Breaks
ChIP-seq
Homo sapiens
51
27/09/2018
-
ENA
62
-
Investigation of titanium coated imprinted polystyrene surfaces
transcription profiling by array
Homo sapiens
24
25/09/2018
73
-
NGS data from ‘Treatment of a metabolic liver disease by in vivo genome base editing in adult mice’
genotyping by high throughput sequencing
Homo sapiens, Mus musculus
165
25/09/2018
ENA
100
-
The diurnal transcriptional landscape of the microalga Tetradesmus obliquus
RNA-seq of coding RNA
Tetradesmus obliquus
73
24/09/2018
-
ENA
76
-
RNA-sequencing of the mRNA transcriptome in lesional and non-lesional skin, across three time-points in severe psoriasis patients treated with the tumor necrosis factor (TNF) inhibitor, etanercept
RNA-seq of coding RNA
Homo sapiens
59
21/09/2018
ENA
132
-
RNA-sequencing of the small-RNA transcriptome in blood, across three time-points in severe psoriasis patients treated with the tumor necrosis factor (TNF) inhibitor, etanercept
microRNA profiling by high throughput sequencing
Homo sapiens
30
21/09/2018
-
ENA
114
-
Surface topography enhances differentiation of mesenchymal stem cells towards osteogenic and adipogenic lineages
transcription profiling by array
Homo sapiens
9
20/09/2018
79
-
RNA-seq of Chenopodium quinoa salt glands compared to whole leaves with or without salt glands
RNA-seq of coding RNA
Chenopodium quinoa
12
20/09/2018
-
ENA
77
-
Differential gene expression study in brain samples from patients suffering distinct frontotemporal lobar degeneration (FTLD) conditions
transcription profiling by array
Homo sapiens
30
19/09/2018
-
88
-
Bulk segregant analysis of 3D growth defective mutant in Physcomitrella patens (Vx501)
DNA-seq
Physcomitrella patens
4
19/09/2018
-
ENA
77
-
Cell-free serum miRNA signature of synovial sarcoma
transcription profiling by array
Homo sapiens
15
19/09/2018
115
-
RNAseq of murine brown fat, white fat and skeletal muscle
RNA-seq of coding RNA
Mus musculus
9
18/09/2018
-
ENA
109
-
Gene expression microarray of human pulmonary endothelial cells from patients with Chronic Obstructive Pulmonary Disease in comparison with normal controls
transcription profiling by array
Homo sapiens
14
18/09/2018
92
-