A-GEOD-10558 - Illumina HumanHT-12 V4.0 expression beadchip

Homo sapiens
Array Manufacturer: Illumina Inc., Distribution: commercial, Technology: oligonucleotide beads, The HumanHT-12 v4 Expression BeadChip provides high throughput processing of 12 samples per BeadChip without the need for expensive, specialized automation. The BeadChip is designed to support flexible usage across a wide-spectrum of experiments. The updated content on the HumanHT-12 v4 Expression BeadChips provides more biologically meaningful results through genome-wide transcriptional coverage of well-characterized genes, gene candidates, and splice variants. Each array on the HumanHT-12 v4 Expression BeadChip targets more than 31,000 annotated genes with more than 47,000 probes derived from the National Center for Biotechnology Information Reference Sequence (NCBI) RefSeq Release 38 (November 7, 2009) and other sources. Please use the GEO Data Submission Report Plug-in v1.0 for Gene Expression which may be downloaded from
to format the normalized and raw data. These should be submitted as part of a GEOarchive. Instructions for assembling a GEOarchive may be found at

Reporter Name = Unique identifier for the probe (across all products and species)

Comment[Source] = Transcript sequence source name

Comment[Search_Key] = Internal id useful for custom design array

Comment[Transcript] = Internal transcript id

Comment[ILMN_Gene] = Internal gene symbol

Comment[Source_Reference_ID] = Id in the source database

Comment[RefSeq_ID] = Refseq id

Comment[Unigene_ID] = Unigene id

Comment[Entrez_Gene_ID] = Entrez gene id

Reporter Database Entry [gi] = Genbank id

Comment[Accession] = Genbank accession number

Comment[Symbol] = Gene symbol from the source database

Comment[Protein_Product] = Genbank protein accession number

Comment[Array_Address_Id] = Decoder id

Comment[Probe_Type] = Information about what this probe is targeting

Comment[Probe_Start] = Position of the probe relative to the 5' of the source transcript sequence

Reporter Sequence = Probe sequence

Comment[Chromosome] = Chromosome

Comment[Probe_Chr_Orientation] = Orientation on the NCBI genome built

Comment[Probe_Coordinates] = genomic position of the probe on the NCBI genome built

Comment[Definition] = Gene description from the source

Comment[Ontology_Component] = Cellular component annotations from Gene Ontology project

Comment[Ontology_Process] = Biological process annotations from Gene Ontology project

Comment[Ontology_Function] = Molecular function annotations from Gene Ontology project

Comment[Synonyms] = Gene symbol synonyms from Refseq

Comment[Obsolete_Probe_Id] = Identifier of probe id before bgx time

Reporter Database Entry [genbank] = LINK_PRE:
Illumina Inc.(expression@illumina.com, techsupport@illumina.com)
All 1303 experiments done using A-GEOD-10558