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Microbiome Informatics

Suite of services for the assembly, archiving, and analysis of microbiome-derived sequence data

HGNC/VGNC


The HUGO Gene Nomenclature Committee (HGNC) is responsible for approving unique symbols and names for human loci, including protein coding genes, ncRNA genes and pseudogenes, to allow unambiguous scientific communication.

For each known human gene we approve a gene name and symbol (short-form abbreviation), as well as a unique HGNC identifier (ID), which are stored in the HGNC database, www.genenames.org. This is a curated online repository of HGNC-approved gene nomenclature, gene groups and associated resources including links to genomic, proteomic and phenotypic information. Ideally, gene symbols are short, memorable and pronounceable, and most gene names are long-form descriptions of the symbol. Names should be brief and specific, and should convey something about the character or function of the gene products but not attempt to describe everything known. Each gene is assigned only one symbol; the HGNC does not routinely name isoforms (that is, alternate transcripts or splice variants). Ideally each symbol maintains parallel construction in different members of a gene family and can also be used in other species, especially across vertebrates. Our gene naming guidelines are discussed in Bruford et al., 2020.

Our sister project, the Vertebrate Gene Nomenclature Committee (VGNC), is responsible for assigning standardized names to genes in selected vertebrate species that currently lack a nomenclature committee. The VGNC aims to harmonize vertebrate gene nomenclature in line with human gene nomenclature, with orthologs being assigned the same nomenclature where possible, and also coordinates with the 5 existing vertebrate nomenclature committees for mouse, rat, chicken, Xenopus and zebrafish.

To read the latest articles from our Genenames blog please click on the links below:

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