Thomas Keane

Thomas Keane
Team Leader, EGA and Archive Infrastructure

Before joining EMBL-EBI as Team Leader in 2016, Thomas led the Sequence Variation Infrastructure group in the Computational Genomics programme at the Wellcome Trust Sanger Institute. His interests are in using genomic technologies to learn about biological processes, with a particular focus on mouse and human disease.

ORCID iD: 0000-0001-7532-6898

Tel:+ 44 (0) 1223 49 4349 / Fax:

Keane team

European Variation Archive

The European Variation Archive is an open-access database of all types of genetic variation data, from all species. The EVA provides access to highly detailed, granular, raw variant data from human, animal and plant species. All users can download data from any study, or submit their own data to the archive. You can also query all variants in the EVA by study, gene, chromosomal location or dbSNP identifier using our VCF Browser. The EVA maintains and makes regular new releases of locus accessions (rs IDs) for all non-human species.

The European Genome-phenome Archive

The European Genome-phenome Archive (EGA) contains human data collected from research participants whose consent agreements authorise data release only to bona fide researchers and possibly for specific uses. Strict protocols govern how information is managed, stored and distributed by the EGA project. The EGA help desk provides service for both data submitters and those seeking access to the available datasets.

The European Nucleotide Archive

The European Nucleotide Archive (ENA) captures and presents information relating to experimental workflows that are based around nucleotide sequencing. The ENA is a partner in the International Nucleotide Sequence Database Collaboration (INSDC) to provide worldwide exchange and replication of all public nucleotide sequences.

Publications

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Team members

  • Jeff Almeida-King
  • Pablo Arce Garcia
  • Declan Bennett
  • Iain Cleland
  • Minjie Ding
  • Anthony Doran
  • Cristina Yenyxe Gonzalez
  • Neil Goodgame
  • Jorge Izquierdo Ciges
  • Selvakumar Kamatchinathan
  • Jag Kandasamy
  • Giselle Kerry
  • Rasko Leinonen
  • Jingtao Lilue
  • Zhicheng Liu
  • Jose Miguel Mut Lopez
  • Swapna Pallreddy
  • Gary Saunders
  • Alexander Senf
  • Dmitriy Smirnov
  • Dylan Spalding
  • Saif Ur-Rehman
  • Sundararaman Venkataraman
  • Senthilnathan Vijayaraja
  • Alexander Vikhorev
  • Josue Martinez Villacorta