Updates from data resources
MGnify just got bigger – new data, new AI opportunities
New releases: InterPro 93.0 and InterProScan 5.61-93.0
Latest Release of the Single Cell Expression Atlas
New Job Dispatcher website launched
Ensembl 109 has been released
PDCM Finder – an open global cancer research platform for patient-derived cancer models
New releases: InterPro 92.0 and InterProScan 5.60-92.0
First linked dataset on Pathogens Portal
BioModels competition: Showcase your model of the year
Compare experimental and predicted structures with PDBe-KB
Ensembl 108 has been released
New releases: InterPro 91.0 and InterProScan 5.59-91.0
ArrayExpress interface now retired
New releases: InterPro 90.0 and InterProScan 5.57-90.0
Ensembl 107 has been released
Interactive data visualisation for Single Cell Expression Atlas
New releases: InterPro 89.0 and InterProScan 5.56-89.0
ArrayExpress interface to close
2.4 billion sequences now available in the latest MGnify protein database release
Predicted complexes from ModelArchive now on PDBe-KB pages
New release: Ensembl 106
Latest Release of the Single Cell Expression Atlas
New releases: InterPro 88.0 and InterProScan 5.55-88.0
New Expression Atlas release in collaboration with PRIDE
AlphaFold update – neglected tropical diseases
Cow-rumen catalogue v1.0 released in MGnify
UHGG v2.0 released in MGnify
ENA: Improving spatio-temporal annotations
Ensembl 105 has been released
New releases: InterPro 87.0 and InterProScan 5.53-87.0
Enriched metadata fields in MGnify based on text-mining of associated publications
ENA Webin file submission services maintenance downtime
New releases: InterPro 86.0 and InterProScan 5.52-86.0
Ensembl 104 has been released
New releases: InterPro 85.0 and InterProScan 5.51-85.0
New releases: InterPro 84.0 and InterProScan 5.50-84.0
Anatomograms - a new feature in the Single Cell Expression Atlas
New releases: InterPro 83.0 and InterProScan 5.48-83.0
Ensembl 102 has been released!
Read file downloads unavailable Thursday 12th November 2020
New releases: InterPro 82.0 and InterProScan 5.47-82.0
Ensembl 101 has been released!
New releases: InterPro 81.0 and InterProScan 5.46-81.0
Retirement of old ENA Browser on 5th August 2020
Ensembl Rapid Release
Changes to ftp.dcc-private.ebi.ac.uk file download services 1st of September 2020
New tool for sequence similarity searches in Coronaviruses
May 2020 releases: Single Cell Expression Atlas and Expression Atlas
Ensembl launches COVID-19 resource
New releases: InterPro 79.0 and InterProScan 5.44-79.0
Ensembl 100 has been released!
Release 143 of ENA's assembled/annotated sequences is now available
Submissions to ENA through all tools and interfaces are in operation and open for all data types
ENA data submission service disruption
ENA data submission service (“Webin”) disruptions 11th-27th March
VGNC now naming pig genes
Ensembl 99 has been released!
Release 142 of ENA's assembled/annotated sequences is now available
RNAcentral 14: LSU secondary structures and 5 new databases
Retirement of periodic ENA assembled/annotated sequence release in March 2020
New releases: InterPro 77.0 and InterProScan 5.39-77.0
ENA Nucleic Acids Research 2019 paper published
EVA's first non-human RS ID release
Release 141 of ENA's assembled/annotated sequences is now available
New Single Cell Expression Atlas release is live
Release 140 of ENA's assembled/annotated sequences is now available
Enzyme Portal: Facilitating enzyme research
New releases: InterPro 74.0 and InterProScan 5.35-74.0
Release 139 of ENA's assembled/annotated sequences is now available
Ensembl 96 and Ensembl Genomes 43 are out!
New releases: InterPro 73.0 and InterProScan 5.34 - 73.0
RNAcentral 11 is live
Rfam 14.1 is now available
New releases: InterPro 72.0 and InterProScan 5.33-72.0
Ensembl 95 has been released
Bone remodelling - BioModels Model of the Month
New releases: InterPro 71.0 and InterProScan 5.32-71.0
Latest ENA Nucleic Acids Research DB issue paper published
Expanded INSDC sequence accession formats in December 2018
New ENA Assembly Submission Tool: Webin-CLI
Increasing the power of the GWAS Catalog for human disease research
European Genome-phenome Archive 10th Anniversary Symposium
ENA Sequence Retrieval Day
UniProt release 2018_06
New releases: InterPro 69.0 and InterProScan 5.30-69.0
ENA release 136
One search - all the data
Highlighting RNA in a protein world
New releases: InterPro 68.0 and InterProScan 5.29-68.0
RNAcentral 9 is available
Ensembl 92 has been released!
UniProt release 2018_03
ENA Release 135
New releases: InterPro 67.0 and InterProScan 5.28-67.0
Forthcoming changes to WGS and TSA sequences
ENA release 134
Europe PMC releases new search snippet feature
ENA services over the holiday period
ENA release 134 expected early January
UniProt release 2017_12
Ensembl release 91
RNAcentral release 8
UniProt release 2017_11
New releases: InterPro 66.0 and InterProScan 5.27-66.0
New literature API: Europe PMC Annotations
BioModels Model of the Month: Calmodulin
UniProt release 2017_10
Read data download issues resolved
ENA read data download issues
ENA Release 133
New releases: InterPro 65.0 and InterProScan 5.26-65.0
EMBL-EBI to be HTTPS by default from 1-October
Ensembl release 90 – Loads more genomes
Submission service maintenance - 14/7/17 to 17/7/17
Update to Aspera server
UniProt Release 2017_07
ENA Release 132
Taxon support for sequence, WGS and assembly in ENA Browser Tools
New releases: InterPro 64.0 and InterProScan 5.25-64.0
Rfam 12.3 has been released
New tools to download data from ENA
Guide to metagenomics data standards and best practice published
SIFT-ing through sequence space in the PDB
RNAcentral Release 7
New releases: InterPro 63.0 and InterProScan 5.24-63.0
New ENA discovery API
ENA Release 131
New releases: InterPro 62.0 and InterProScan 5.23-62.0
UniProt release 2017_02: Freshwater fish see red
Changes to the Trace Archive at ENA
New releases: InterPro 61.0 and InterProScan 5.22-61.0
FTP Service update
ENA Release 130
UniProt Release 2016_11
ENA launches Browser and Advanced Search surveys
Benchmarking data analysis software
UniProt release 2016_10
New releases: InterPro 60.0 and InterProScan 5.21-60.0
ENA release 129
UniProt release 2016_09
Expression Atlas New Release
Reactome milestone: 10,000 human protein records
New releases: InterPro 59.0 and InterProScan 5.20-59.0
UniProt release 2016_08
Maintaining our data centres
Projects and studies merged in the ENA browser
Scheduled disruption to ENA services
European Variation Archive release 3: over 540 million unique variants
Ensembl 85 is out!
GO, slim, GO!
New Protein Data REST API
UniProt release 2016_07
RESTful RNA-seq Analysis API version 1.2 is out
Expression Atlas: new release, new species, new features!
ENA Release 128
RESTful RNA-seq Analysis API version 1.1 is out
New releases: InterPro 58.0 and InterProScan 5.19-58.0
UniProt 2016_06 release
New: RESTful On-the-fly Gene Set Overlap Analysis API
UniProt release 2016_05
Proteomics data on the rise: how can you take part?
ExpressionAtlas: New R package for search and download
ChEBI highlight: phorbol
Expression Atlas: new release is out!
UniProt release 2016_04: over 64 million proteins
Learn ArrayExpress with our new Train online course
ENA Release 127
New releases: InterPro 57.0 and InterProScan 5.18-57.0
Expression Atlas: now with over 2600 datasets
EnsemblGenomes 31 is out!
European Variation Archive release 2: new data, new features
UniProt release 2016_03
Ensembl 84 is out!
New: RESTful RNA-seq Analysis API
A new view on proteins
New releases: InterPro 56.0 and InterProScan 5.17-56.0
UniProt release 2016_02
Environmental data curation: new publication
Changes to WGS and TSA sequences in the ENA browser
ChEBI entity of the month: S-Propyl propanethiosulfinate and plants
Open Author Profiles at Europe PMC: ORCIDs in Action
UniProt 2016_01 release
Assembly XML now available from ENA
ENA launches comprehensive CRAM indexing
Ensembl Genomes 30 is out!
UniProt 2015_12 release
ENA Release 126
Ensembl 83 is out!
InterPro 55.0 and InterProScan 5.16-55.0 released
Proposed improvements to the GWAS Catalog: REST API and genomic mapping
UniProt 2015_11 release
Change to Globus endpoint for public ENA data
Ensembl Genomes 29 is out!
New version of UniProtJAPI client released
Reactome Pathway Browser: packed with new features
UniProt release 2015_10
New releases: InterPro 54.0 and InterProScan 5.15-54.0
Ensembl version 82 release
ENA Release 125
GWAS Catalog
Further tools retirements
Lanosterol and cataracts: ChEBI entity of the month
European Variation Archive version 1.0
Ensembl Genomes release 28
New releases: InterPro 53.0 and InterProScan 5.14-53.0
Ensembl version 81 release
Reactome releases knowledgebase version 53
ENA release 124
ChEBI's entity of the month: Butyl anthranilate
UniProt release 2015_07
Sample Checklist Updates - June 2015
Ensembl Genomes release 27 is out!
Changes to read data submission services 1st of October 2015
ChEBI's entity of the month: Oleocanthal
UniProt 2015_06 release
Ensembl version 80 released
New releases: InterPro 52.0 and InterProScan 5.12-52.0
ChEBI's entity of the month: Neonicotinoid insectides
UniProt Release 2015_05
UniProt release 2015_04
Fireworks: Reactome's new Pathway Overview feature
Expression Atlas release
ENA release 123
New releases: InterPro 51.0 and InterProScan 5.11-51.0
UniProt release 2015_03
Ensembl release 79
Upcoming tools retirements in 2015
Planned changes to ENA sequence search
UniProt 2015_02 released
New releases: InterPro 50.0 and InterProScan 5.10-50.0
ChEMBL 20 takes the HELM
UniProt release 2015_01
Reactome releases knowledgebase version 51
ENA release 122
UniProt release 2014_11 now available
Ensembl 78 release
IntAct December update
Simplification of data release procedures
ENA/EMG Sample Record Annotation Workshop
New releases: InterProScan 5.8-49.0 and InterPro 49.0
Big (protein) data to knowledge
UniProt release 2014_10
After 10 years, Reactome hits 50!
Release 2014_09 and evidences in flat files
Ensembl version 77 release
Rfam 12.0 released
ENA release 121
UniProt release 2014_08 and new website
Read data through Globus GridFTP
DAS services to retire
Changes to SRA XML 1.5
Ensembl version 76 release
IntAct dataset of the month: the Human Proteostasis network
ChEMBL_19 Released - Now with Crop Protection Data!
Reactome: new publications available
New Reactome Pathway Analysis Portal
A baker's dozen: new pathways in Reactome release 49
UniProt release 2014_07
World-wide Protein Data Bank improves representation of large structures
New releases: InterProScan 5.5-48.0 and InterPro 48.0
ENA release 120
New Analysis Tools for Reactome
Over 1 billion biological data records publicly searchable
UniProt release 2014_06
Change to date format for advanced search
Dionysian mysteries: The aldehyde dehydrogenase family
InterProScan 5.4-47.0 and InterPro 47.0 released
New in InterPro: Search by domain organisation
Update to the ENA SAMPLE checklist
UniProt release 2014_05
MD5 sequence checksums in Coding flat files
Protein Data Bank in Europe to incorporate OpenEye cheminformatics software
Proteomic Services: supporting research into cardiac disease
IntAct Update: May 2014
ChEBI: April's entity of the month
ChEBI moves to weekly updates
UniProt release 2014_04
Are you good at predicting protein interactions?
IntAct April 2014: Dataset of the month
Reactome releases knowledgebase version 48
Retirement of legacy file report URL in July 2014
UniProt release 2014_03
Change of ENA release FTP location in September 2014
ENA release 119
IntAct March 2014: Dataset of the month and service updates
Ensembl version 75 release
NGS data CRAMming, Archiving & Exploring course
UniProt release 2014_02
NGS data CRAMming, Archiving & Exploring course on April 2nd 2014
CRAM 2.1
IntAct Update: February 2014
Change to coding results in ENA Browser
The Pistoia Alliance and EMBL-EBI announce HELM collaboration for cheminformatics
InterProScan 5.3-46.0 and InterPro 46.0 released
UniProt release 2014_01
Change in CDS FTP products
Mapping structural data to biological pathways
Reactome releases knowledgebase version 47
Webin authentication
ENA release 118
IntAct Update: December 2013
Ensembl version 74 release
InterProScan 5.2-45.0 and InterPro 45.0 released
UniProt release 2013_11
IntAct Update: November 2013
BioLayout Express 3D for visualising biological networks
First bulk CRAM submission to ENA
First bulk CRAM submission to ENA
UniProt release 2013_10
Reactome releases knowledgebase version 46
IntAct: October 2013 Update
Reactome launches new web interface
InterProScan 5 and InterPro 44.0 released
ENA Release 117
Ensembl version 73 release
IntAct: September 2013 Update
ISCB Wikipedia Competition
IntAct: August 2013 Update
New in InterPro: release 43.1
Webinar on the GWAS Catalog
EMBL-EBI staff at ISMB/ECCB 2013, Berlin
Change to EMBL-Bank flat file AC lines
UniProt 2013_07 release
ENA release 116
IntAct: July 2013 Update
The Naming of Things
Reactome release 45
Ensembl version 72 release
Expression Atlas Linked Data
BioModels announces Release 25
CRAM 2.0 launch
IntAct release 165 highlight: the SH3 interactome
New in InterPro: release 43.0
UniProt 2013_06 release
IntAct Release 164b
UniProt 2013_05 release
InterPro 42.0 released
CRAM 2.0: pre-launch of compression format and toolkit
New IntAct release
CRAM 2.0 pre-launch
New to Reactome: Binding and uptake of ligands by scavenger receptors
ChEBI release 101 is now available, with 31651 fully annotated entities
Changes to EMBL-CDS FTP products
UniProt News: The smoke's devils
Gene Ontology Annotation (UniProt-GOA) database updated
SwissProt and TrEMBL Protein database release
ChEBI release 100 is now available, with 31,222 fully annotated entities
IntAct release 161 now contains 305,888 binary interactions from 6177 manually curated publications
The latest Ensembl update (e!67) has just gone live
UniProt 2013_01 is out
SwissProt and TrEMBL Protein database release
Gene Ontology Annotation (UniProt-GOA) Database updated
ChEBI release 99 is now available, with 30,797 fully annotated entities
Release 114 of the EMBL Nucleotide Sequence Database
Reactome Version 43
IntAct release 160 now contains 304.562 binary interactions from 6006 manually curated publications
24th release of BioModels Database
ChEBI release 98 is now available, with 30,537 fully annotated entities
CRAM launches...
RESTful and Query builder interfaces to ENA launched in beta
Approaching full production for CRAM
Just published: 'The future of DNA sequence archiving'
ENA policy relating to compression of submitted data
CRAM 0.8 released
CRAM toolkit 0.7 released
The future of sequence archiving
CRAM toolkit 0.6 released
ENA training videos now available on the EMBL-EBI YouTube Channel
ENA data go Galactic
CRAM toolkit 0.5 released
CRAM toolkit 0.3 released
ArchiveBAM 1.0 specification
ENA User Survey 2011 now available
Next Generation Sequencing Workshop at EBI
EMBL-EBI and Sequence Read Archive
MIENS specification
SRA article