Thornton Group Structural Tools
Tools from the Thornton research group. Additional resources are available at the Thornton Group.
Annotated enzyme reaction mechanisms.
Structural analysis, including PROCHECK, for user-submitted PDB file.
Visualization of sequence and conservation of pore-lining residues in transmembrane protein structures.
Detection and characterisation of transmembrane protein channels.
Protein function prediction from protein 3D structure.
Sequence Annotated by Structure.
Calculation of residue conservation from multiple sequence alignment.
Tools from the Protein Data Bank in Europe. Additional resources are available at the PDBe homepage.
Secondary Structure Matching service (SSM) for the interactive comparison, alignment and superposition of protein structures in 3D.
Flexible 3D search and analysis of ligands, sequence, structural features and interaction motifs.
Exploration of macromolecular (protein, DNA/RNA and ligand) interfaces and prediction of quarternary structures.