Pepinfo (EMBOSS) More Information & Help Documentation

Create a variety of plots that display different amino acid properties, such as hydropathy or charged residues, and their position in the sequence

Launch Pepinfo

Pepstats (EMBOSS) More Information & Help Documentation

Calculate properties of your protein such as molecular weight

Launch Pepstats

Pepwindow (EMBOSS) More Information & Help Documentation

Draw a hydropathy plot for your protein sequence

Launch Pepwindow

SAPS More Information & Help Documentation

Evaluate a wide variety of additional protein sequence properties

Launch SAPS

Cpgplot (EMBOSS) More Information & Help Documentation

Identify and plot CpG islands in nucleotide sequence(s)

Launch Cpgplot

Newcpgreport (EMBOSS) More Information & Help Documentation

Identify CpG islands in nucleotide sequence(s)

Launch Newcpgreport

Isochore (EMBOSS) More Information & Help Documentation

Plot isochores in DNA sequences

Launch Isochore

Dotmatcher (EMBOSS) More Information & Help Documentation

Draw a threshold dotplot of two sequences

Launch Dotmatcher

Dotpath (EMBOSS) More Information & Help Documentation

Draw a non-overlapping wordmatch dotplot of two sequences

Launch Dotpath

Dottup (EMBOSS) More Information & Help Documentation

Display a wordmatch dotplot of two sequences

Launch Dottup

Polydot (EMBOSS) More Information & Help Documentation

Draw dotplots for all-against-all comparison of a sequence set

Launch Polydot

The tools described on this page are provided using Programmatic access to bioinformatics tools from EMBL-EBI update: 2017. If you have any feedback or encounter any issues please let us know via EMBL-EBI support.