Multiple Sequence Alignment

MUSCLE stands for MUltiple Sequence Comparison by Log- Expectation. MUSCLE is claimed to achieve both better average accuracy and better speed than ClustalW2 or T-Coffee, depending on the chosen options.

Important note: This tool can align up to 500 sequences or a maximum file size of 1 MB.

STEP 1 - Enter your input sequences

a set of sequences in any supported format:

Or a file:

STEP 2 - Set your Parameters
STEP 3 - Submit your job
(Tick this box if you want to be notified by email when the results are available)
If available, the title will be included in the subject of the notification email and can be used as a way to identify your analysis

If you plan to use these services during a course please contact us.