Dbfetch
ID Y08682; SV 1; linear; mRNA; STD; HUM; 2592 BP. XX AC Y08682; XX DT 06-MAR-1997 (Rel. 51, Created) DT 07-OCT-2008 (Rel. 97, Last updated, Version 6) XX DE H.sapiens mRNA for carnitine palmitoyltransferase I type I XX KW carnitine palmitoyltransferase I; CPT1B gene. XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RX DOI; 10.1016/S0167-4781(97)00037-7. RX PUBMED; 9199240. RA van der Leij F.R., Takens J., van der Veen A.Y., Terpstra P., RA Kuipers J.R.G.; RT "Localization and intron usage analysis of the human CPT1B gene for muscle RT type carnitine palmitoyltransferase I"; RL Biochim. Biophys. Acta 1352(2):123-128(1997). XX RN [2] RP 1-2592 RA van der Leij F.R.; RT ; RL Submitted (04-OCT-1996) to the INSDC. RL F.R. van der Leij, Dept of Pediatrics, University of Groningen, Research RL Lab CMCV 2nd floor, PO Box 30 001, 9700 RB Groningen, NETHERLANDS XX DR MD5; c3f619f92e321168ba1a12cac1288e31. DR Ensembl-Gn; ENSG00000205560; homo_sapiens. DR Ensembl-Tr; ENST00000312108; homo_sapiens. DR Ensembl-Tr; ENST00000360719; homo_sapiens. DR Ensembl-Tr; ENST00000395650; homo_sapiens. DR Ensembl-Tr; ENST00000405237; homo_sapiens. DR Ensembl-Tr; ENST00000457250; homo_sapiens. XX CC Related sequences U62317 and D64178 XX FH Key Location/Qualifiers FH FT source 1..2592 FT /organism="Homo sapiens" FT /chromosome="22" FT /map="q telomere" FT /isolate="21 year old caucasian male" FT /mol_type="mRNA" FT /clone_lib="CLONTECH Marathon first strand cDNA, Cat.nr. FT 7413-1" FT /tissue_type="skeletal muscle" FT /db_xref="taxon:9606" FT mRNA join(1..32,33..192,193..332,333..510,511..612,613..750, FT 751..828,829..936,937..1021,1022..1217,1218..1403, FT 1404..1509,1510..1626,1627..1791,1792..1926,1927..2079, FT 2080..2193,2194..2286,2287..2372,2373..2592) FT /gene="CPT1B" FT exon 1..32 FT /number=1 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 33..192 FT /number=2 FT /experiment="experimental evidence, no additional details FT recorded" FT CDS join(52..192,193..332,333..510,511..612,613..750,751..828, FT 829..936,937..1021,1022..1217,1218..1403,1404..1509, FT 1510..1626,1627..1791,1792..1926,1927..2079,2080..2193, FT 2194..2286,2287..2370) FT /gene="CPT1B" FT /product="carnitine palmitoyltransferase I" FT /EC_number="2.3.1.21" FT /note="type I" FT /db_xref="GOA:Q92523" FT /db_xref="H-InvDB:HIT000325465.14" FT /db_xref="HGNC:HGNC:2329" FT /db_xref="InterPro:IPR000542" FT /db_xref="InterPro:IPR032476" FT /db_xref="InterPro:IPR039551" FT /db_xref="InterPro:IPR042231" FT /db_xref="InterPro:IPR042232" FT /db_xref="UniProtKB/Swiss-Prot:Q92523" FT /protein_id="CAA69938.1" FT /translation="MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIR FT IKNGILRGVYPGSPTSWLVVIMATVGSSFCNVDISLGLVSCIQRCLPQGCGPYQTPQTR FT ALLSMAIFSTGVWVTGIFFFRQTLKLLLCYHGWMFEMHGKTSNLTRIWAMCIRLLSSRH FT PMLYSFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKY FT LVLKSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVLIKNTDVQAARLGNIIHAM FT IMYRRKLDREEIKPVMALGIVPMCSYQMERMFNTTRIPGKDTDVLQHLSDSRHVAVYHK FT GRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAF FT FSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCYNRWFDKSFT FT LISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTR FT LQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQL FT AHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQK FT AAKKHQNMYRLAMTGAGIDRHLFCLYLVSKYLGVSSPFLAEVLSEPWRLSTSQIPQSQI FT RMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSETNAQRFGNH FT IRKALLDIADLFQVPKAYS" FT exon 193..332 FT /number=3 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 333..510 FT /number=4 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 511..612 FT /number=5 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 613..750 FT /number=6 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 751..828 FT /number=7 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 829..936 FT /number=8 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 937..1021 FT /number=9 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 1022..1217 FT /number=10 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 1218..1403 FT /number=11 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 1404..1509 FT /number=12 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 1510..1626 FT /number=13 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 1627..1791 FT /number=14 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 1657..1791 FT /number=14 FT /note="alternative exon" FT /experiment="experimental evidence, no additional details FT recorded" FT exon 1792..1926 FT /number=15 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 1927..2079 FT /number=16 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 2080..2193 FT /number=17 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 2194..2286 FT /number=18 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 2287..2372 FT /number=19 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 2373..2592 FT /number=20 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 2379..2592 FT /number=20 FT /note="alternative exon" FT /experiment="experimental evidence, no additional details FT recorded" FT regulatory 2568..2573 FT /regulatory_class="polyA_signal_sequence" XX SQ Sequence 2592 BP; 560 A; 770 C; 710 G; 552 T; 0 other; gccccacgca cggacaggag tgaacccgag ctgtgccgac caacccccag gatggcggaa 60 gctcaccagg ccgtggcctt ccagttcacg gtgaccccag acggggtcga cttccggctc 120 agtcgggagg ccctgaaaca cgtctacctg tctgggatca actcctggaa gaaacgcctg 180 atccgcatca agaatggcat cctcaggggc gtgtaccctg gcagccccac cagctggctg 240 gtcgtcatca tggcaacagt gggttcctcc ttctgcaacg tggacatctc cttggggctg 300 gtcagttgca tccagagatg cctccctcag gggtgtggcc cctaccagac cccgcagacc 360 cgggcacttc tcagcatggc catcttctcc acgggcgtct gggtgacggg catcttcttc 420 ttccgccaaa ccctgaagct gcttctctgc taccatgggt ggatgtttga gatgcatggc 480 aagaccagca acttgaccag gatctgggct atgtgtatcc gccttctatc cagccggcac 540 cctatgctct acagcttcca gacatctctg cccaagcttc ctgtgcccag ggtgtcagcc 600 acaattcagc ggtacctaga gtctgtgcgc cccttgttgg atgatgagga atattaccgc 660 atggagttgc tggccaaaga attccaggac aagactgccc ccaggctgca gaaatacctg 720 gtgctcaagt catggtgggc aagtaactat gtgagtgact ggtgggaaga gtacatctac 780 cttcgaggca ggagccctct catggtgaac agcaactatt atgtcatgga ccttgtgctc 840 atcaagaata cagacgtgca ggcagcccgc ctgggaaaca tcatccacgc catgatcatg 900 tatcgccgta aactggaccg tgaagaaatc aagcctgtga tggcactggg catagtgcct 960 atgtgctcct accagatgga gaggatgttc aacaccactc ggatcccggg caaggacaca 1020 gatgtgctac agcacctctc agacagccgg cacgtggctg tctaccacaa gggacgcttc 1080 ttcaagctgt ggctctatga gggcgcccgt ctgctcaagc ctcaggatct ggagatgcag 1140 ttccagagga tcctggacga cccctcccca cctcagcctg gggaggagaa gctggcagcc 1200 ctcactgcag gaggaagggt ggagtgggcg caggcacgcc aggccttctt tagctctgga 1260 aagaataagg ctgccttgga ggccatcgag cgtgccgctt tcttcgtggc cctggatgag 1320 gaatcctact cctatgaccc cgaagatgag gccagcctca gcctctatgg caaggccctg 1380 ctacatggca actgctacaa caggtggttt gacaaatcct tcactctcat ttccttcaag 1440 aatggccagt tgggtctcaa tgcagagcat gcgtgggcag atgctcccat cattgggcac 1500 ctctgggagt ttgtcctggg cacagacagc ttccacctgg gctacacgga gaccgggcac 1560 tgcctgggca aaccgaaccc tgcgctcgca cctcctacac ggctgcagtg ggacattcca 1620 aaacagtgcc aggcggtcat cgagagttcc taccaggtgg ccaaggcgtt ggcagacgac 1680 gtggagttgt actgcttcca gttcctgccc tttggcaaag gcctcatcaa gaagtgccgg 1740 accagccctg atgcctttgt gcagatcgcg ctgcagctgg ctcacttccg ggacaggggt 1800 aagttctgcc tgacctatga ggcctcaatg accagaatgt tccgggaggg acggactgag 1860 actgtgcgtt cctgtaccag cgagtccaca gcctttgtgc aggccatgat ggaggggtcc 1920 cacacaaaag cagacctgcg agatctcttc cagaaggctg ctaagaagca ccagaatatg 1980 taccgcctgg ccatgaccgg ggcagggatc gacaggcacc tcttctgcct ttacttggtc 2040 tccaagtacc taggagtcag ctctcctttc cttgctgagg tgctctcgga accctggcgt 2100 ctctccacca gccagatccc ccaatcccag atccgcatgt tcgacccaga gcagcacccc 2160 aatcacctgg gcgctggagg tggctttggc cctgtagcag atgatggcta tggagtttcc 2220 tacatgattg caggcgagaa cacgatcttc ttccacatct ccagcaagtt ctcaagctca 2280 gagacgaacg cccagcgctt tggaaaccac atccgcaaag ccctgctgga cattgctgat 2340 cttttccaag ttcccaaggc ctacagctga agcccttagg tacctgtgtt ttgtttggga 2400 actcggaggc cctccccctc ccccagctca gaccacagag gtggcaagag aagggctgaa 2460 gctggaagac tgttcatgag ggacttgtgt gacctgcttt gaaatgtgtg actctgctga 2520 gtgacgtagg ctctgagata gctgtccacg cccacgtgtt tgcttggaat aaatacttgc 2580 ctcagaacct tc 2592 //