Dbfetch
ID X03069; SV 1; linear; mRNA; STD; HUM; 1182 BP. XX AC X03069; XX DT 02-JUL-1986 (Rel. 09, Created) DT 17-JUN-2008 (Rel. 96, Last updated, Version 5) XX DE Human mRNA for HLA-D class II antigen DR1 beta chain XX KW class II antigen; glycoprotein; major histocompatibility complex; KW signal peptide. XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1182 RX PUBMED; 2998758. RA Tonnelle C., DeMars R., Long E.O.; RT "DO beta: a new beta chain gene in HLA-D with a distinct regulation of RT expression"; RL EMBO J. 4(11):2839-2847(1985). XX DR MD5; 23021a781144408bcb89c5a271fb7e9d. DR IMGT/HLA; HLA-DRB1*01:01:01; HLA00664. XX CC Data kindly reviewed (08-OCT-1986) by E. Long XX FH Key Location/Qualifiers FH FT source 1..1182 FT /organism="Homo sapiens" FT /mol_type="mRNA" FT /db_xref="taxon:9606" FT CDS 63..863 FT /note="precursor" FT /db_xref="GOA:P04229" FT /db_xref="H-InvDB:HIT000320962.14" FT /db_xref="HGNC:HGNC:4948" FT /db_xref="InterPro:IPR000353" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR011162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014745" FT /db_xref="InterPro:IPR036179" FT /db_xref="PDB:1AQD" FT /db_xref="PDB:1DLH" FT /db_xref="PDB:1FYT" FT /db_xref="PDB:1HXY" FT /db_xref="PDB:1JWM" FT /db_xref="PDB:1JWS" FT /db_xref="PDB:1JWU" FT /db_xref="PDB:1KG0" FT /db_xref="PDB:1KLG" FT /db_xref="PDB:1KLU" FT /db_xref="PDB:1LO5" FT /db_xref="PDB:1PYW" FT /db_xref="PDB:1R5I" FT /db_xref="PDB:1SEB" FT /db_xref="PDB:1SJE" FT /db_xref="PDB:1SJH" FT /db_xref="PDB:1T5W" FT /db_xref="PDB:1T5X" FT /db_xref="PDB:2FSE" FT /db_xref="PDB:2G9H" FT /db_xref="PDB:2IAM" FT /db_xref="PDB:2IAN" FT /db_xref="PDB:2ICW" FT /db_xref="PDB:2IPK" FT /db_xref="PDB:2OJE" FT /db_xref="PDB:2XN9" FT /db_xref="PDB:3L6F" FT /db_xref="PDB:3PDO" FT /db_xref="PDB:3PGC" FT /db_xref="PDB:3PGD" FT /db_xref="PDB:3QXA" FT /db_xref="PDB:3QXD" FT /db_xref="PDB:3S4S" FT /db_xref="PDB:3S5L" FT /db_xref="PDB:4AEN" FT /db_xref="PDB:4AH2" FT /db_xref="PDB:4C56" FT /db_xref="PDB:4E41" FT /db_xref="PDB:4FQX" FT /db_xref="PDB:4GBX" FT /db_xref="PDB:4I5B" FT /db_xref="PDB:4OV5" FT /db_xref="PDB:4X5W" FT /db_xref="PDB:4X5X" FT /db_xref="PDB:6CQJ" FT /db_xref="PDB:6CQR" FT /db_xref="UniProtKB/Swiss-Prot:P04229" FT /protein_id="CAA26873.1" FT /translation="MVCLKLPGGSCMTALTVTLMVLSSPLALAGDTRPRFLWQLKFECH FT FFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQRRAAV FT DTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRN FT GQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRARSE FT SAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPTGFLS" FT sig_peptide 63..149 FT /note="put. signal peptide (aa -29 to -1)" FT mat_peptide 150..860 FT /note="DR1 beta (aa 1-237)" FT misc_feature 162..163 FT /note="put. splice site (exon 1/2)" FT misc_feature 432..433 FT /note="put. splice site (exon 2/3)" FT misc_feature 714..715 FT /note="put. splice site (exon 3/4)" FT misc_feature 825..826 FT /note="put. splice site (exon 4/5)" FT misc_feature 849..850 FT /note="put. splice site (exon 5/6)" FT misc_feature 1157..1162 FT /note="put. polyadenylation signal" XX SQ Sequence 1182 BP; 250 A; 312 C; 340 G; 280 T; 0 other; tagttctccc tgagtgagac ttgcctgctt ctctggcccc tggtcctgtc ctgttctcca 60 gcatggtgtg tctgaagctc cctggaggct cctgcatgac agcgctgaca gtgacactga 120 tggtgctgag ctccccactg gctttggctg gggacacccg accacgtttc ttgtggcagc 180 ttaagtttga atgtcatttc ttcaatggga cggagcgggt gcggttgctg gaaagatgca 240 tctataacca agaggagtcc gtgcgcttcg acagcgacgt gggggagtac cgggcggtga 300 cggagctggg gcggcctgat gccgagtact ggaacagcca gaaggacctc ctggagcaga 360 ggcgggccgc ggtggacacc tactgcagac acaactacgg ggttggtgag agcttcacag 420 tgcagcggcg agttgagcct aaggtgactg tgtatccttc aaagacccag cccctgcagc 480 accacaacct cctggtctgc tctgtgagtg gtttctatcc aggcagcatt gaagtcaggt 540 ggttccggaa cggccaggaa gagaaggctg gggtggtgtc cacaggcctg atccagaatg 600 gagattggac cttccagacc ctggtgatgc tggaaacagt tcctcggagt ggagaggttt 660 acacctgcca agtggagcac ccaagtgtga cgagccctct cacagtggaa tggagagcac 720 ggtctgaatc tgcacagagc aagatgctga gtggagtcgg gggcttcgtg ctgggcctgc 780 tcttccttgg ggccgggctg ttcatctact tcaggaatca gaaaggacac tctggacttc 840 agccaacagg attcctgagc tgaaatgcag atgaccacat tcaaggaaga accttctgtc 900 ccagctttgc agaatgaaaa gctttcctgc ttggcagtta ttcttccaca agagagggct 960 ttctcaggac ctggttgcta ctggttcggc aactgcagaa aatgtcctcc cttgtggctt 1020 cctcagctcc tgcccttggc ctgaagtccc agcattgatg acagcgcctc atcttcaact 1080 tttgtgctcc cctttgccta aaccgtatgg cctcccgtgc atctgtactc accctgtacg 1140 acaaacacat tacattatta aatgtttctc aaagatggag tt 1182 //