Dbfetch
ID BC147078; SV 1; linear; mRNA; STD; MUS; 1417 BP. XX AC BC147078; XX DT 13-MAY-2008 (Rel. 95, Created) DT 13-MAY-2008 (Rel. 95, Last updated, Version 1) XX DE Mus musculus protein O-fucosyltransferase 2, mRNA (cDNA clone MGC:182169 DE IMAGE:9056063), complete cds. XX KW MGC. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-1417 RX DOI; 10.1073/pnas.242603899. RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1417 RG NIH MGC Project RA ; RT ; RL Submitted (26-JUN-2007) to the INSDC. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR MD5; c2415a81186e88f46eade618878bc3dc. DR Ensembl-Gn; ENSMUSG00000020260; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0017395; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AJ_G0017372; mus_musculus_aj. DR Ensembl-Gn; MGP_AKRJ_G0017333; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0017332; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0017156; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0017790; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0016726; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0017128; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0017233; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0017225; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0017306; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0017254; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0017829; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0016510; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0016789; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000020493; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0025881; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AJ_T0025858; mus_musculus_aj. DR Ensembl-Tr; MGP_AKRJ_T0025819; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0025822; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0025631; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0026318; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0025196; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0025566; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0025680; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0025674; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0025795; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0025676; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0026364; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0024908; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0025172; mus_musculus_wsbeij. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Ambion CC cDNA Library Preparation: British Columbia Cancer Research Center CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson CC Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen CC Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel CC Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave CC Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR CC Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, CC Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: LLDM Plate: 682 Row: e Column: 21. XX FH Key Location/Qualifiers FH FT source 1..1417 FT /organism="Mus musculus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_378" FT /clone="MGC:182169 IMAGE:9056063" FT /tissue_type="Brain, PCR rescued clones" FT /note="Vector: pCR4-TOPO with reversed insert; Clone FT identification sequence tag: TATTACCA" FT /db_xref="taxon:10090" FT gene 1..1417 FT /gene="Pofut2" FT /note="synonyms: C21orf80, FUT13" FT CDS 91..1380 FT /codon_start=1 FT /gene="Pofut2" FT /product="protein O-fucosyltransferase 2" FT /db_xref="GOA:B2RV73" FT /db_xref="InterPro:IPR019378" FT /db_xref="MGI:MGI:1916863" FT /db_xref="UniProtKB/TrEMBL:B2RV73" FT /protein_id="AAI47079.1" FT /translation="MAALSVVCLLLAAASWRPVSASGEEFWPGQSAADILSGAASRRRY FT LLYDVNPPEGFNLRRDVYIRVASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPW FT SEFFDLPSLNKNIPVIEYEQFIAESGGPFIDQVYVLQGYAEGWKEGTWEEKVDARPCID FT PLLYSQDKHEYYRGWFWGYEETRGLNVSCLSVQGSASIVAPVLLKNTSARSVMLDRAEN FT LLHDHYGGREYWDTRRSMVFAKHLRAVGDEFRSQHLNSTDAADKMAPEEDWTKMKVKLG FT SALGGPYLGVHLRRKDFIWGHREDVPSLEGAVKKIRSLMKTHQLDKVFVATDAIRKEQE FT ELRKLLPEMVRFEPTWEELELYKDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREI FT LGLDPKTTYNRFCGDQEKACEQPTHWKIAY" XX SQ Sequence 1417 BP; 301 A; 387 C; 450 G; 279 T; 0 other; gccgtagcta ctggagacgc gctccgtggg gcggacaggc gcacttccgg accggggcgc 60 ggcagccgga agtgcgtggc cgccggggcc atggcggcgc tcagcgtcgt ctgcctgctg 120 ctggcagcgg catcctggcg gccggtctcg gcttcaggag aagaattctg gcctggccag 180 tcggcggcgg acatcctgtc gggggcggca tcccgcagac ggtacctcct gtatgatgtc 240 aaccccccag aaggcttcaa tctccgcagg gatgtctata tccgggtggc atccttgctg 300 aagacgctgt tgaagactga agagtgggtg ctagtcctgc ccccgtgggg ccgcctctac 360 cactggcaaa gccctgacat ccaccaggtc cggattccct ggtccgagtt ttttgacctc 420 ccgagtctca ataaaaacat ccccgttata gagtatgagc agttcattgc agagtccggc 480 gggcccttta tcgaccaggt gtacgtccta caaggttacg ccgagggctg gaaggagggc 540 acctgggagg agaaggtgga cgcacggccc tgtattgacc ctctgctgta ctcgcaggac 600 aagcatgagt attacagagg ctggttttgg ggctacgaag aaacacgggg tctgaatgtc 660 tcctgcctgt ccgtccaggg gtcggcttcc atcgtcgcgc ctgtcctctt aaaaaacaca 720 tctgctcggt ctgtgatgct ggaccgagct gagaatctgc ttcatgacca ctatggaggc 780 cgggagtact gggatacccg gcgcagcatg gtgtttgcaa agcacttgcg ggctgtggga 840 gacgagttta ggagccagca cctcaactcg acggatgccg ctgataagat ggccccggag 900 gaagactgga cgaagatgaa ggtcaaactg ggctcagcac taggcggccc ctacctcgga 960 gtccacctga gaaggaagga cttcatctgg ggccacaggg aggatgtgcc cagcctggag 1020 ggcgccgtga agaagatccg cagcctcatg aagactcatc agctggacaa ggtgttcgtg 1080 gccacagacg ccatcaggaa ggagcaggaa gaattgagga agctgctgcc ggaaatggtg 1140 aggtttgagc ccacgtggga ggagctggag ctgtacaagg acggaggcgt cgccatcatc 1200 gatcagtgga tctgcgctca tgccaggttt tttattggca cctctgtttc cacattttcc 1260 tttcggattc atgaagagag agagatcctg gggttggacc ccaagacaac atacaaccgg 1320 ttttgtggag accaggagaa agcatgtgag cagcccacac actggaagat tgcgtactga 1380 gggccaccta tccaccgcct gccaatcact cggtcac 1417 //