Dbfetch
ID BC146001; SV 1; linear; mRNA; STD; MUS; 1849 BP. XX AC BC146001; XX DT 17-JUN-2007 (Rel. 92, Created) DT 14-JUL-2007 (Rel. 92, Last updated, Version 2) XX DE Mus musculus 3-phosphoinositide dependent protein kinase-1, mRNA (cDNA DE clone MGC:175888 IMAGE:40131304), complete cds. XX KW MGC. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-1849 RX DOI; 10.1073/pnas.242603899. RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1849 RG NIH MGC Project RA ; RT ; RL Submitted (12-JUN-2007) to the INSDC. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR MD5; 15f9008addf982ba9b2619cdf0b988bd. DR Ensembl-Gn; ENSMUSG00000024122; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0023288; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AJ_G0023248; mus_musculus_aj. DR Ensembl-Gn; MGP_AKRJ_G0023215; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0023253; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0023013; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0023696; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0022515; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0022989; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0023118; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0023088; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0023195; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0023107; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0023734; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0022264; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0022578; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000102927; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0045881; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AJ_T0045859; mus_musculus_aj. DR Ensembl-Tr; MGP_AKRJ_T0045812; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0045824; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0045556; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0046309; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0045662; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0045487; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0045609; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0045577; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0045711; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0045551; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0046392; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0045247; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0044932; mus_musculus_wsbeij. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Ambion CC cDNA Library Preparation: British Columbia Cancer Research Center CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson CC Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen CC Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel CC Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave CC Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR CC Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, CC Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRCK Plate: 7 Row: P Column: 1. XX FH Key Location/Qualifiers FH FT source 1..1849 FT /organism="Mus musculus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_378" FT /clone="MGC:175888 IMAGE:40131304" FT /tissue_type="Brain, PCR rescued clones" FT /note="Vector: pCR4-TOPO with reversed insert; Clone FT identification sequence tag: TTATGGTC" FT /db_xref="taxon:10090" FT gene 1..1849 FT /gene="Pdpk1" FT /note="synonym: Pdk1" FT CDS 72..1751 FT /codon_start=1 FT /gene="Pdpk1" FT /product="3-phosphoinositide dependent protein kinase-1" FT /db_xref="GOA:Q9Z2A0" FT /db_xref="InterPro:IPR000719" FT /db_xref="InterPro:IPR008271" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR011993" FT /db_xref="InterPro:IPR017441" FT /db_xref="InterPro:IPR033931" FT /db_xref="InterPro:IPR039046" FT /db_xref="MGI:MGI:1338068" FT /db_xref="UniProtKB/Swiss-Prot:Q9Z2A0" FT /protein_id="AAI46002.1" FT /translation="MARTTSQLYDAVPIQSSVVLCSCPSPSMVRSQTEPGSSPGIPSGV FT SRQGSTMDGTTAEARPSTNPLQQHPAQLPPQPRKKRPEDFKFGKILGEGSFSTVVLARE FT LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS FT YAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI FT QITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG FT LPPFRAGNEYLIFQKIIKLEYHFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLK FT AHPFFETITWENLHQQTPPKLTAYLPAMSEDDEDCYGNYDNLLSQFGFMQVSSSSSSHS FT LSTVETSLPQRSGSNIEQYIHDLDTNSFELDLQFSEDEKRLLLEKQAGGNPWHQFVENN FT LILKMGPVDKRKGLFARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQELRPEAKNFKTF FT FVHTPNRTYYLMDPSGNAHKWCRKIQEVWRQQYQSNPDAAVQ" XX SQ Sequence 1849 BP; 511 A; 463 C; 444 G; 431 T; 0 other; ggatgaggac gctgaggagg cgccgagcag cgcaacgctg cgggggaggc gcccgcgccg 60 acttggggct catggccagg accaccagcc agctgtatga cgctgtgccc attcagtcca 120 gtgtggtgct atgttcctgc ccatccccat caatggtgag gtcccagact gagcccggtt 180 cgtcccctgg cattcctagt ggtgttagca ggcagggatc caccatggat ggcaccacag 240 ctgaagcccg accaagcacc aaccccttgc agcagcaccc tgcccagctg ccaccacagc 300 ctcgcaagaa acgccctgaa gacttcaagt ttgggaaaat tcttggcgag ggctcttttt 360 caacagttgt tctggcccga gaactggcca cttccagaga atatgctatt aaaattctgg 420 agaaacgtca tattataaaa gaaaacaaag ttccgtatgt aactagagag agagatgtga 480 tgtcacgcct ggatcacccc ttctttgtga aactttattt tacatttcag gacgacgaaa 540 agctgtattt tggccttagt tatgccaaaa atggagagct acttaaatac atccgcaaaa 600 ttggctcatt tgatgagacc tgtacccggt tttacacggc tgagattgtg tctgctttag 660 agtacttgca tggcaagggc atcattcaca gagaccttaa accagaaaac attttgttaa 720 atgaagacat gcacatccag atcacagatt ttggaacagc aaaagtgtta tccccagaga 780 gcaaacaagc cagggccaac tcatttgtag gaacagcaca gtatgtttct ccagagctgc 840 tcacagagaa gtcggcgtgt aaaagttcag acctttgggc ccttggatgt ataatctatc 900 agctcgtggc aggactccca ccattcagag ccgggaatga atatcttata tttcagaaga 960 tcattaagct ggaatatcat ttcccagaaa aattcttccc taaggctaga gatcttgtgg 1020 aaaaactctt ggttttagat gccacaaagc gtttaggctg tgaagagatg gaagggtacg 1080 ggcctctcaa agctcatcca ttctttgaga ccatcacttg ggagaatttg caccagcaga 1140 cacctccgaa gctcacagct tacctaccag ccatgtcaga ggatgatgaa gactgctatg 1200 gcaactacga caatctcctg agccagtttg gcttcatgca ggtgtcatcc tcctcctctt 1260 cccactccct gtctacggtg gaaaccagcc tgccccagag gtcgggcagc aacatagagc 1320 agtacatcca tgatttggac actaactctt ttgaactaga cttacagttt tcagaagatg 1380 aaaaaaggtt gttattggaa aagcaagccg gtggaaaccc ttggcaccag tttgtagaaa 1440 ataatctaat attaaaaatg ggtccagtgg ataagcgaaa gggtttattt gcaagacgac 1500 gacagttatt actcacagaa gggccacatt tatattatgt tgatcctgtc aacaaggtct 1560 tgaaaggtga aatcccatgg tcacaagaac tccgaccaga agccaagaat tttaaaactt 1620 tctttgtcca cacgcctaac aggacgtact acctgatgga tccaagcggg aatgctcaca 1680 agtggtgcag aaagatccag gaggtttgga ggcagcagta ccagagcaat ccagatgctg 1740 ctgtgcagtg acgtggcctg cggccgggct gcctattgct gccaggatac ctgccccagc 1800 gcggctcggc cgccacccag gacgcttcca gaccacctgc cagccatct 1849 //