Dbfetch
ID BC138503; SV 1; linear; mRNA; STD; MUS; 1052 BP. XX AC BC138503; XX DT 13-MAY-2008 (Rel. 95, Created) DT 13-MAY-2008 (Rel. 95, Last updated, Version 1) XX DE Mus musculus calcium channel, voltage-dependent, gamma subunit 4, mRNA DE (cDNA clone MGC:170128 IMAGE:8861523), complete cds. XX KW MGC. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-1052 RX DOI; 10.1073/pnas.242603899. RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1052 RG NIH MGC Project RA ; RT ; RL Submitted (29-MAR-2007) to the INSDC. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR MD5; 469f1f07e88a8c38674853e18a7b8f0d. DR Ensembl-Gn; ENSMUSG00000020723; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0019323; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AJ_G0019291; mus_musculus_aj. DR Ensembl-Gn; MGP_AKRJ_G0019260; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0019265; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0019074; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0019715; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0018627; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0019043; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0019155; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0019146; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0019225; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0019176; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0019752; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0018392; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0018678; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000021066; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0033168; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AJ_T0033116; mus_musculus_aj. DR Ensembl-Tr; MGP_AKRJ_T0033101; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0033105; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0032891; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0033604; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0032732; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0032799; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0032951; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0032934; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0033070; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0032934; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0033641; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0032425; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0032355; mus_musculus_wsbeij. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Ambion CC cDNA Library Preparation: British Columbia Cancer Research Center CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson CC Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen CC Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel CC Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave CC Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR CC Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, CC Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: LLDM Plate: 667 Row: h Column: 1. XX FH Key Location/Qualifiers FH FT source 1..1052 FT /organism="Mus musculus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_378" FT /clone="MGC:170128 IMAGE:8861523" FT /tissue_type="Brain, PCR rescued clones" FT /note="Vector: pCR4-TOPO with reversed insert; Clone FT identification sequence tag: CGACTGCA" FT /db_xref="taxon:10090" FT gene 1..1052 FT /gene="Cacng4" FT CDS 20..1003 FT /codon_start=1 FT /gene="Cacng4" FT /product="calcium channel, voltage-dependent, gamma subunit FT 4" FT /db_xref="GOA:A2AAU2" FT /db_xref="InterPro:IPR004031" FT /db_xref="InterPro:IPR005423" FT /db_xref="InterPro:IPR008368" FT /db_xref="MGI:MGI:1859167" FT /db_xref="UniProtKB/TrEMBL:A2AAU2" FT /protein_id="AAI38504.1" FT /translation="MVRCDRGLQMLLTTAGAFAAFSLMAIAIGTDYWLYSSAHICNGTN FT LTMDDGPPPRRARGDLTHSGLWRVCCIEGIYRGHCFRINHFPEDNDYDHDSSEYLLRIV FT RASSVFPILSTILLLLGGLCIGAGRIYSRKNNIVLSAGILFVAAGLSNIIGIIVYISSN FT TGDPSDKRDEDKKNHYNYGWSFYFGALSFIVAETVGVLAVNIYIEKNKELRFKTKREFL FT KASSSSPYARMPSYRYRRRRSRSSSRSTEASPSRDASPVGLKITGAIPMGELSMYTLSR FT EPLKVTTAASYSPDQDAGFLQMHDFFQQDLKEGFHVSMLNRRTTPV" XX SQ Sequence 1052 BP; 221 A; 338 C; 279 G; 214 T; 0 other; ggactatgag gcgcccacca tggtgcgatg cgaccgcggg ctgcagatgc tgctgaccac 60 ggccggagcc ttcgccgcct tctcgctcat ggccatcgcc atcggcaccg actactggct 120 gtactccagc gcgcacatct gcaacggcac caacctgacc atggacgacg ggcccccgcc 180 ccgccgcgct cgcggcgacc tcacccattc gggactgtgg cgggtgtgtt gcatcgaagg 240 catctataga gggcactgct tccggatcaa ccacttccca gaggacaacg attacgacca 300 cgacagctcc gagtacctcc tccgcattgt gcgagcctcc agtgtctttc ccatcctcag 360 caccattctg ctcctgctcg gagggctctg catcggcgct gggaggatct acagccgcaa 420 gaacaatatt gtcctcagcg cgggaatcct ctttgtggcg gcaggcctca gtaatatcat 480 cggtatcatc gtctacattt ccagcaacac gggcgacccc agtgacaaac gtgacgaaga 540 caaaaagaac cattacaact acggctggtc tttttacttt ggagccctgt cgtttattgt 600 ggcggagacc gtgggcgtcc tggctgtaaa catttacatt gagaaaaata aagagttgag 660 gtttaagacc aagcgggagt tccttaaggc ctcttcctcc tctccttacg ccaggatgcc 720 gagctacagg taccggcgac ggcggtccag gtccagttca aggtccacgg aggcctcacc 780 ctccagggat gcatctcccg tgggcctgaa gatcaccgga gccattccca tgggtgagct 840 gtccatgtac acgctatcca gagaacccct taaggtgacc acagctgcga gctacagtcc 900 ggaccaggac gctggcttcc tgcagatgca tgacttcttc caacaggacc taaaggaagg 960 tttccatgtc agcatgctga accggcggac aactcccgtg tgacccgccc acccctctcg 1020 gcacaggcct cccccaaggt ggctgtttgt gt 1052 //