Dbfetch
ID BC138062; SV 1; linear; mRNA; STD; MUS; 2159 BP. XX AC BC138062; XX DT 13-MAY-2008 (Rel. 95, Created) DT 13-MAY-2008 (Rel. 95, Last updated, Version 1) XX DE Mus musculus frizzled homolog 8 (Drosophila), mRNA (cDNA clone MGC:169686 DE IMAGE:8861081), complete cds. XX KW MGC. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-2159 RX DOI; 10.1073/pnas.242603899. RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2159 RG NIH MGC Project RA ; RT ; RL Submitted (29-MAR-2007) to the INSDC. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR MD5; 943817cb5c53b5f266f0d9e614faff12. DR Ensembl-Gn; ENSMUSG00000036904; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0024138; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AJ_G0024100; mus_musculus_aj. DR Ensembl-Gn; MGP_AKRJ_G0024067; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0024099; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0023866; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0024544; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0023343; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0023838; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0023967; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0023932; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0024050; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0023961; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0024590; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0023088; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0023409; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000041080; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0048965; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AJ_T0048943; mus_musculus_aj. DR Ensembl-Tr; MGP_AKRJ_T0048902; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0048904; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0048648; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0049398; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0048734; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0048578; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0048679; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0048644; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0048795; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0048648; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0049500; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0048334; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0047953; mus_musculus_wsbeij. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Ambion CC cDNA Library Preparation: British Columbia Cancer Research Center CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson CC Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen CC Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel CC Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave CC Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR CC Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, CC Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: LLDM Plate: 666 Row: e Column: 15. XX FH Key Location/Qualifiers FH FT source 1..2159 FT /organism="Mus musculus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_377" FT /clone="MGC:169686 IMAGE:8861081" FT /tissue_type="Brain, PCR rescued clones" FT /note="Vector: pCR4-TOPO; Clone identification sequence FT tag: TCATCCCC" FT /db_xref="taxon:10090" FT gene 1..2159 FT /gene="Fzd8" FT /note="synonyms: Fz8, mFZ8" FT CDS 65..2122 FT /codon_start=1 FT /gene="Fzd8" FT /product="frizzled homolog 8 (Drosophila)" FT /db_xref="GOA:Q61091" FT /db_xref="InterPro:IPR000539" FT /db_xref="InterPro:IPR015526" FT /db_xref="InterPro:IPR017981" FT /db_xref="InterPro:IPR020067" FT /db_xref="InterPro:IPR036790" FT /db_xref="InterPro:IPR041776" FT /db_xref="MGI:MGI:108460" FT /db_xref="PDB:1IJY" FT /db_xref="PDB:4F0A" FT /db_xref="PDB:6AHY" FT /db_xref="UniProtKB/Swiss-Prot:Q61091" FT /protein_id="AAI38063.1" FT /translation="MEWGYLLEVTSLLAALAVLQRSSGAAAASAKELACQEITVPLCKG FT IGYNYTYMPNQFNHDTQDEAGLEVHQFWPLVEIQCSPDLKFFLCSMYTPICLEDYKKPL FT PPCRSVCERAKAGCAPLMRQYGFAWPDRMRCDRLPEQGNPDTLCMDYNRTDLTTAAPSP FT PRRLPPPPPPGEQPPSGSGHSRPPGARPPHRGGSSRGSGDAAAAPPSRGGKARPPGGGA FT APCEPGCQCRAPMVSVSSERHPLYNRVKTGQIANCALPCHNPFFSQDERAFTVFWIGLW FT SVLCFVSTFATVSTFLIDMERFKYPERPIIFLSACYLFVSVGYLVRLVAGHEKVACSGG FT APGAGGAGGAGGAAAAGAGAAGAGASSPGARGEYEELGAVEQHVRYETTGPALCTVVFL FT LVYFFGMASSIWWVILSLTWFLAAGMKWGNEAIAGYSQYFHLAAWLVPSVKSIAVLALS FT SVDGDPVAGICYVGNQSLDNLRGFVLAPLVIYLFIGTMFLLAGFVSLFRIRSVIKQQGG FT PTKTHKLEKLMIRLGLFTVLYTVPAAVVVACLFYEQHNRPRWEATHNCPCLRDLQPDQA FT RRPDYAVFMLKYFMCLVVGITSGVWVWSGKTLESWRALCTRCCWASKGAAVGAGAGGSG FT PGGSGPGPGGGGGHGGGGGSLYSDVSTGLTWRSGTASSVSYPKQMPLSQV" XX SQ Sequence 2159 BP; 345 A; 701 C; 702 G; 411 T; 0 other; cctcactgca gagccctcct gcgcgccgcc tagagaagga ggacttgggg tcccagcgcg 60 cagcatggag tggggttacc tgttggaagt gacctcgctc ctagccgcct tggcggtgct 120 acagcgctct agcggcgctg ccgcggcttc ggccaaggag ctggcgtgcc aagagatcac 180 ggtgccgttg tgcaaaggca tcggttacaa ctacacttac atgcccaacc agttcaacca 240 cgacacgcaa gatgaggcgg gcctagaggt gcaccagttt tggccgctgg tggagataca 300 gtgctccccg gacctcaagt tctttctgtg tagcatgtac acgcccatct gcctggagga 360 ctacaagaag cctctgccgc cttgtcgctc tgtgtgtgaa cgcgccaagg ccggctgcgc 420 gccgctcatg cgccagtacg gctttgcttg gcctgaccgc atgcgctgcg atcggttgcc 480 ggagcagggc aacccggaca ctctgtgcat ggactacaac cgcaccgacc tcaccacggc 540 cgcgcccagc ccaccgcgcc gcctgcctcc gccgcctcct cccggcgagc agccgccctc 600 tggcagcggc cacagccgcc cgccaggggc caggccccca catcgtggcg gcagcagtag 660 gggcagcggg gacgcggcgg ctgcgccccc ttcgcgcggc gggaaggcga ggccccctgg 720 tggcggcgct gctccctgcg agccggggtg ccagtgccgc gcgcccatgg tgagcgtgtc 780 cagcgaacgc cacccgctct acaaccgcgt caagaccggc cagatcgcca actgtgcgct 840 gccctgccac aaccccttct ttagccagga tgagcgcgcc ttcaccgtct tctggatcgg 900 cctgtggtcg gtgctctgct tcgtctccac cttcgccact gtctctacct tcctcatcga 960 tatggagcgc tttaagtacc cggaacggcc catcatattc ctctccgcct gttacctctt 1020 cgtgtctgtc gggtacctgg tgcgcctggt ggcaggacat gagaaagtgg cctgcagcgg 1080 cggcgctccg ggtgctggcg gagctggggg tgcgggcggc gcggcggcgg ctggcgcagg 1140 ggcagcggga gcgggggcga gcagcccggg cgcgcgcggc gagtacgagg agctgggtgc 1200 agtcgagcag catgttcgct atgaaaccac tggccccgcg ctgtgcacgg tggtctttct 1260 ccttgtctac ttttttggca tggccagctc catctggtgg gtaatcctgt cgctcacgtg 1320 gttcttggca gctggcatga agtggggtaa tgaggccata gcaggctact cgcagtactt 1380 ccacctggcc gcgtggcttg tgcccagcgt caagtccatc gcggtgctgg cgctcagctc 1440 cgtagacggc gacccggtgg cgggcatctg ctacgtgggc aaccagagcc ttgacaacct 1500 acgcggcttt gtgctggcgc cactggttat ctacctcttc attgggacta tgtttctgtt 1560 agctggcttc gtgtcgctgt tccgaatccg ttcagtcatc aagcagcaag gaggcccaac 1620 taagacacac aagctagaaa aactcatgat ccgcttgggc ctcttcaccg tgctctacac 1680 ggtgcccgct gccgtcgttg tcgcctgcct tttctatgag cagcacaacc gaccgcgctg 1740 ggaggccacg cacaactgcc catgccttcg ggacctgcaa ccggaccagg ctcgcaggcc 1800 cgattacgcg gtcttcatgc tcaagtactt catgtgccta gtagtgggca tcacatcggg 1860 cgtgtgggtc tggtccggca agactctgga gtcctggcgc gcgttgtgca ctaggtgctg 1920 ctgggccagc aagggcgctg cagtaggcgc gggcgctgga ggcagcggcc ctgggggcag 1980 tggacccggg cccggcggag gtgggggaca cggcggaggc gggggatccc tctacagcga 2040 cgtcagtacc ggcctgacgt ggcggtctgg cacggccagc tctgtatctt accctaagca 2100 aatgccattg tcccaggtct gaaccctacg tggatgccca gaaggggcgg agaggagtg 2159 //