Dbfetch
ID BC057983; SV 2; linear; mRNA; STD; MUS; 4670 BP. XX AC BC057983; XX DT 18-SEP-2003 (Rel. 77, Created) DT 23-JAN-2018 (Rel. 135, Last updated, Version 9) XX DE Mus musculus pregnancy zone protein, mRNA (cDNA clone MGC:65284 DE IMAGE:5134629), complete cds. XX KW MGC. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-4670 RX DOI; 10.1073/pnas.242603899. RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-4670 RG NIH MGC Project RA ; RT ; RL Submitted (08-SEP-2003) to the INSDC. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX RN [3] RC Sequence update by database staff to remove vector contamination RP 1-4670 RG NIH MGC Project RA ; RT ; RL Submitted (19-JAN-2018) to the INSDC. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR MD5; 11510f55b106adf8d86bc32ce7e9e86f. DR Ensembl-Gn; ENSMUSG00000030359; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0031328; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AKRJ_G0031227; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0031306; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0031030; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0031765; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0030411; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0030991; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0031147; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0031097; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0031227; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0031135; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0031798; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0030126; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0030496; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000112132; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0080375; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AKRJ_T0080376; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0080392; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0080015; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0080858; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0080594; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0079966; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0080122; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0080001; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0080160; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0080018; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0081125; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0080017; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0079109; mus_musculus_wsbeij. XX CC On Jan 19, 2018 this sequence version replaced BC057983.1. CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Jeffrey E. Green, M.D. CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: National Institutes of Health Intramural CC Sequencing Center (NISC), CC Gaithersburg, Maryland; CC Web site: http://www.nisc.nih.gov/ CC Contact: nisc_mgc@nhgri.nih.gov CC Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., CC Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., CC Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., CC Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., CC Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., CC McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., CC Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., CC Young,A., Zhang,L.-H. and Green,E.D. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 123 Row: h Column: 6 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 6680607. XX FH Key Location/Qualifiers FH FT source 1..4670 FT /organism="Mus musculus" FT /lab_host="DH10B" FT /strain="FVB/N" FT /mol_type="mRNA" FT /clone_lib="NCI_CGAP_Li9" FT /clone="MGC:65284 IMAGE:5134629" FT /tissue_type="Liver, normal. 5 month old male mouse." FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:10090" FT gene 1..4670 FT /gene="Pzp" FT /gene_synonym="A1m" FT /gene_synonym="MAM" FT CDS 31..4518 FT /codon_start=1 FT /gene="Pzp" FT /gene_synonym="A1m" FT /gene_synonym="MAM" FT /product="pregnancy zone protein" FT /db_xref="GOA:Q61838" FT /db_xref="InterPro:IPR001599" FT /db_xref="InterPro:IPR002890" FT /db_xref="InterPro:IPR008930" FT /db_xref="InterPro:IPR009048" FT /db_xref="InterPro:IPR011625" FT /db_xref="InterPro:IPR011626" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014756" FT /db_xref="InterPro:IPR019742" FT /db_xref="InterPro:IPR036595" FT /db_xref="InterPro:IPR040839" FT /db_xref="InterPro:IPR041555" FT /db_xref="InterPro:IPR041813" FT /db_xref="MGI:MGI:87854" FT /db_xref="UniProtKB/Swiss-Prot:Q61838" FT /protein_id="AAH57983.1" FT /translation="MRRNQLPTPAFLLLFLLLPRDATTATAKPQYVVLVPSEVYSGIPE FT KACVSLNHVNETVMLSLTLEYAMQQTKLLTDQAVDKDSFYCSPFTISGSPLPYTFITVE FT IKGPTQRFIKKKSIQIIKAESPVFVQTDKPIYKPGQIVKFRVVSVDISFRPLNETFPVV FT YIETPKRNRIFQWQNIHLAGGLHQLSFPLSVEPALGIYKVVVQKDSGKKIEHSFEVKEY FT VLPKFEVIIKMQKTMAFLEEELPITACGVYTYGKPVPGLVTLRVCRKYSRYRSTCHNQN FT SMSICEEFSQQADDKGCFRQVVKTKVFQLRQKGHDMKIEVEAKIKEEGTGIELTGIGSC FT EIANALSKLKFTKVNTNYRPGLPFSGQVLLVDEKGKPIPNKNITSVVSPLGYLSIFTTD FT EHGLANISIDTSNFTAPFLRVVVTYKQNHVCYDNWWLDEFHTQADHSATLVFSPSQSYI FT QLELVFGTLACGQTQEIRIHYLLNEDIMKNEKDLTFYYLIKARGSIFNLGSHVLSLEQG FT NMKGVFSLPIQVEPGMAPEAQLLVYAILPNEELVADAQNFEIEKCFANKVNLSFPSAQS FT LPASDTHLKVKAAPLSLCALTAVDQSVLLLKPEAKLSPQSIYNLLPGKTVQGAFFGVPV FT YKDHENCISGEDITHNGIVYTPKHSLGDNDAHSIFQSVGINIFTNSKIHKPRFCQEFQH FT YPAMGGVAPQALAVAASGPGSSFRAMGVPMMGLDYSDEINQVVEVRETVRKYFPETWIW FT DLVPLDVSGDGELAVKVPDTITEWKASAFCLSGTTGLGLSSTISLQAFQPFFLELTLPY FT SVVRGEAFTLKATVLNYMSHCIQIRVDLEISPDFLAVPVGGHENSHCICGNERKTVSWA FT VTPKSLGEVNFTATAEALQSPELCGNKLTEVPALVHKDTVVKSVIVEPEGIEKEQTYNT FT LLCPQDTELQDNWSLELPPNVVEGSARATHSVLGDILGSAMQNLQNLLQMPYGCGEQNM FT VLFVPNIYVLNYLNETQQLTEAIKSKAINYLISGYQRQLNYQHSDGSYSTFGNHGGGNT FT PGNTWLTAFVLKAFAQAQSHIFIEKTHITNAFNWLSMKQKENGCFQQSGYLLNNAMKGG FT VDDEVTLSAYITIALLEMPLPVTHSVVRNALFCLETAWASISQSQESHVYTKALLAYAF FT ALAGNKAKRSELLESLNKDAVKEEDSLHWQRPGDVQKVKALSFYQPRAPSAEVEMTAYV FT LLAYLTSESSRPTRDLSSSDLSTASKIVKWISKQQNSHGGFSSTQDTVVALQALSKYGA FT ATFTRSQKEVLVTIESSGTFSKTFHVNSGNRLLLQEVRLPDLPGNYVTKGSGSGCVYLQ FT TSLKYNILPVADGKAPFALQVNTLPLNFDKAGDHRTFQIRINVSYTGERPSSNMVIVDV FT KMVSGFIPMKPSVKKLQDQPNIQRTEVNTNHVLIYIEKLTNQTLGFSFAVEQDIPVKNL FT KPAPIKVYDYYETDEFTVEEYSAPFSDGSEQGNA" XX SQ Sequence 4670 BP; 1342 A; 1159 C; 1045 G; 1124 T; 0 other; gctcagacgt tcttctctgc cctctccacc atgaggagaa accagctgcc cacaccagct 60 tttcttttac tgttcctgct tcttcccaga gatgccacca cagctactgc aaaaccacaa 120 tatgtggtgc tggtcccgtc agaggtctat tcaggaatcc ctgaaaaggc ctgtgtcagc 180 ctcaaccatg tgaatgagac tgtgatgctc agcttaactc tagagtatgc aatgcagcaa 240 acgaagctcc tcacagacca ggctgtggat aaggactcct tctactgcag ccccttcacg 300 atctcaggtt cacctttacc ctacacattc attactgtgg agataaaagg accaacgcag 360 cgcttcataa agaagaagtc aatacaaata ataaaagctg agagcccagt ctttgtccag 420 acagacaaac ccatatacaa accaggacag atagtgaaat tccgagttgt ttctgtggac 480 atcagttttc gcccattgaa tgaaacgttc cctgtcgttt atattgagac tcccaagagg 540 aaccgaattt ttcaatggca aaatatccat ctggcaggag gactccacca gctctctttc 600 ccactgtctg ttgagccagc tctgggtatc tacaaggttg tagtgcagaa ggactcaggg 660 aagaaaatag aacactcctt tgaggtgaag gaatacgttt tacccaaatt tgaggtgata 720 ataaaaatgc agaagactat ggctttcctg gaagaggaac ttcctataac tgcttgtggc 780 gtatacacat atggaaagcc tgttcccggt ctggtgacat tgagagtgtg cagaaaatat 840 tcacgatacc gctccacctg ccataaccaa aactcaatga gtatctgtga agaattcagc 900 caacaggcag atgataaagg atgtttcaga caagttgtaa aaaccaaagt attccagctc 960 agacaaaaag gccacgacat gaagatagag gtggaagcca aaatcaaaga ggagggaaca 1020 ggaatagaac taactggtat tggatcatgt gaaatagcaa atgccttaag caaactgaaa 1080 tttactaaag taaatacaaa ttacaggcct gggctacctt tctctggaca ggttcttctt 1140 gttgatgaga agggtaaacc aatccccaac aaaaacataa cttccgtcgt gtctccactt 1200 gggtacctgt ccatttttac tacggatgag catggcttgg ccaacatttc cattgacact 1260 tccaacttca cagctccgtt tttgagagtt gtggtcacct acaagcagaa ccatgtctgc 1320 tatgataact ggtggcttga tgaatttcac acacaggcag accattctgc aactctagtc 1380 ttttctccaa gccagagtta tattcaactt gaacttgttt ttggtacttt ggcctgtggg 1440 caaactcagg agattcggat acactacctc ttgaatgaag atatcatgaa gaatgaaaaa 1500 gacttaacct tttactatct gatcaaagca aggggaagca tcttcaactt aggaagccat 1560 gtgttgtcgc ttgaacaagg aaacatgaaa ggagtctttt ccctcccaat tcaagtggag 1620 ccaggcatgg ctcccgaggc tcagctgctc gtttatgcta ttttacctaa tgaagaactt 1680 gtcgctgatg ctcagaattt tgaaatcgag aagtgttttg ccaacaaggt aaatttgagt 1740 ttcccatcag cacagagcct gccagcctct gacacccacc tgaaggtcaa agccgcgcct 1800 ctgtccctct gtgccctcac tgcagtagac cagagtgtgc tgctactgaa gcccgaagcc 1860 aagctctcac ctcagtcaat ctacaatttg ctgccaggaa agactgtcca gggtgccttc 1920 tttggtgtcc cagtgtacaa agaccatgag aactgcatca gcggagaaga catcactcac 1980 aatgggatcg tgtacacgcc aaagcactct ctgggcgata atgatgcaca cagcattttt 2040 cagtctgtag gaataaatat ttttaccaac tccaaaatcc acaaaccacg cttttgtcaa 2100 gagtttcaac actatccggc aatgggagga gtggcacctc aagccttagc tgtggctgct 2160 tcaggcccag gatccagctt cagagcaatg ggcgtgccga tgatggggtt ggactactct 2220 gatgaaatta atcaggtggt ggaagtaaga gagacagtgc ggaagtactt ccctgagacc 2280 tggatctggg acctggtgcc actggacgta tccggggacg gtgaattggc ggtaaaggtc 2340 cccgacacca tcactgagtg gaaggccagt gcattctgct tgtctggaac cactggcctt 2400 ggcctctcct ccaccatctc ccttcaagcc ttccagccct tcttcttgga gctcactctc 2460 ccatactctg tggtgcgagg ggaagccttt accctcaaag ccaccgtgct caattacatg 2520 tctcactgca ttcagatccg agtggaccta gagatttctc ctgatttcct ggcagtccca 2580 gtggggggcc atgaaaactc tcattgcatc tgtggaaatg aaaggaaaac cgtgtcctgg 2640 gctgtgaccc caaagtcgct gggggaggtg aacttcacag ctaccgcaga agccttgcag 2700 tctccagaat tgtgtggcaa taagttgaca gaagtgccag cccttgtaca caaggacact 2760 gtggtgaagt ccgtaatagt tgagcctgaa ggaattgaga aggagcaaac gtacaacaca 2820 ctgttatgcc cacaagatac tgagttacaa gataattggt cactggagct tccacccaat 2880 gtggttgaag gatctgccag ggctacacat tccgttttgg gtgatatact gggctctgca 2940 atgcaaaacc tccagaatct tctccagatg ccctatggct gtggggaaca aaacatggtc 3000 ctttttgtcc ctaacatcta tgttctgaac tatctgaacg agacacagca gctgacagag 3060 gcgatcaagt ccaaagccat taactacctc atcagtgggt accagaggca gctgaactat 3120 cagcacagtg atggctcgta cagcacattc gggaaccatg gtggtggcaa cactccggga 3180 aatacttggc tcactgcgtt tgtgctcaag gcctttgctc aagctcagtc gcacatcttt 3240 atagagaaga cacacatcac aaatgctttc aactggctct ccatgaaaca aaaggagaat 3300 ggctgtttcc aacagtctgg atatctgctt aacaacgcga tgaagggtgg tgtggatgat 3360 gaagtgactc tctctgccta catcaccatt gctctgctgg agatgcccct gcctgtcacg 3420 cacagtgttg tgcgcaatgc tctgttttgc ctggaaacgg cctgggcctc catctcacag 3480 agccaggaaa gtcatgtcta taccaaggca ttgctggcct atgcctttgc cctggcagga 3540 aacaaggcca agagaagcga actgcttgaa tccctaaaca aagatgctgt gaaggaagag 3600 gattcactgc actggcaacg ccctggggat gttcagaaag tgaaggcctt atctttctat 3660 caacctcggg ccccttctgc cgaagtggag atgacagctt acgtgcttct cgcctatcta 3720 acctctgagt cttcccggcc cacacgggac ctgtcttcat cagacctgtc cacagcatcc 3780 aagattgtga agtggatcag caagcaacaa aactcccacg ggggcttctc ctccactcag 3840 gatacagtgg tggctctcca agccctctcc aaatatggag ctgccacttt tacgagaagt 3900 cagaaagaag tgttggtcac catcgagtct tcagggacct tctctaagac tttccatgtt 3960 aacagtggca atcgcctgct gctgcaggaa gtcaggctgc cagatctgcc cggaaattac 4020 gtcaccaaag ggtcaggatc aggatgtgtg taccttcaga catctctaaa gtacaacatc 4080 ctcccagtgg cagatggaaa agcacccttc gctctgcaag tcaacactct cccactaaac 4140 tttgacaagg caggagatca cagaacattc cagattcgca tcaacgtaag ctacactgga 4200 gaacgaccca gctccaacat ggtcattgtt gatgtgaaga tggtatcagg cttcatacct 4260 atgaagccat ccgtgaaaaa gctccaagac cagcctaaca ttcagaggac tgaagtgaac 4320 accaaccatg ttctaatcta cattgaaaag ctaaccaatc aaaccctcgg tttctccttc 4380 gcggtggaac aagacatccc agtaaagaac ttaaaaccag cccccataaa agtctatgat 4440 tattatgaga cagatgaatt caccgttgaa gaatacagtg cccctttcag tgatggctct 4500 gaacaaggaa atgcttaaaa gtcggaacct atagatgtcc tcagaaggac tcctccacac 4560 atgaagaacc aagaagaaag acagcaagat aaatggaagg gaattaaaaa accataacat 4620 ttatatgttg aataaagtta tgacatttac atctgaaaaa aaaaaaaaaa 4670 //