Dbfetch
ID BC056926; SV 1; linear; mRNA; STD; MUS; 5155 BP. XX AC BC056926; XX DT 18-SEP-2003 (Rel. 77, Created) DT 24-SEP-2008 (Rel. 97, Last updated, Version 4) XX DE Mus musculus brain-specific angiogenesis inhibitor 2, mRNA (cDNA clone DE MGC:66520 IMAGE:5705854), complete cds. XX KW MGC. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-5155 RX DOI; 10.1073/pnas.242603899. RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-5155 RA Strausberg R.; RT ; RL Submitted (25-AUG-2003) to the INSDC. RL National Institutes of Health, Mammalian Gene Collection (MGC), Cancer RL Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, RL Bethesda, MD 20892-2590, USA XX DR MD5; fd73cce9a05d4b02aa0dcf0d889f7171. DR Ensembl-Gn; ENSMUSG00000028782; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0028841; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AJ_G0028800; mus_musculus_aj. DR Ensembl-Gn; MGP_AKRJ_G0028753; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0028823; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0028537; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0029265; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0027969; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0028503; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0028652; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0028619; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0028753; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0028645; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0029303; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0027691; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0028050; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000106015; mus_musculus. DR Ensembl-Tr; ENSMUST00000106017; mus_musculus. DR Ensembl-Tr; ENSMUST00000121049; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0068098; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AJ_T0068155; mus_musculus_aj. DR Ensembl-Tr; MGP_AKRJ_T0068066; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0068077; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0067746; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0068567; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0068180; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0067692; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0067825; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0067738; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0067921; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0067739; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0068749; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0067688; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0066931; mus_musculus_wsbeij. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Jim Lin, University of Iowa CC cDNA Library Preparation: M. Bento Soares, University of Iowa CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, CC Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, CC Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo CC Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven CC Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline CC Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, CC Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, CC George Yang, Scott Zuyderduyn, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 124 Row: j Column: 14 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 27414502. XX FH Key Location/Qualifiers FH FT source 1..5155 FT /organism="Mus musculus" FT /lab_host="DH10B" FT /strain="C57BL/6" FT /mol_type="mRNA" FT /clone_lib="NIH_BMAP_EX0" FT /clone="MGC:66520 IMAGE:5705854" FT /tissue_type="Brain, mouse 15.5 dpc" FT /note="Vector: pYX-ASC" FT /db_xref="taxon:10090" FT gene 1..5155 FT /gene="Bai2" FT CDS 160..4809 FT /codon_start=1 FT /product="Bai2 protein" FT /db_xref="GOA:Q8CGM1" FT /db_xref="InterPro:IPR000203" FT /db_xref="InterPro:IPR000832" FT /db_xref="InterPro:IPR000884" FT /db_xref="InterPro:IPR001879" FT /db_xref="InterPro:IPR008077" FT /db_xref="InterPro:IPR017981" FT /db_xref="InterPro:IPR032471" FT /db_xref="InterPro:IPR036383" FT /db_xref="InterPro:IPR036445" FT /db_xref="MGI:MGI:2451244" FT /db_xref="UniProtKB/Swiss-Prot:Q8CGM1" FT /protein_id="AAH56926.1" FT /translation="MTPACPLLLSVILSLRLATAFDPAPSACSALASGVLYGAFSLQDL FT FPTIASGCSWTLENPDPTKYSLYLRFNRQEQVCTHFAPRLLPLDHYLVNFTCLRPGPEE FT ATARAESEVGRPEEEEEEAAAAASGLELCGGSGPFTFLHFDKNFVQLCLSAEPSEAPRL FT LAPAALAFRFVEVLLINNNNSSQFTCGVLCRWSEECGRAAGRACGFAQPGCSCPGEAGA FT NPATTTSPGPPVAHTLSNALVPGGPAPPAEADLHSGSSNDLFTTEMRYGEEPEEEPKVK FT TQWPRSADEPGLYMAQTGDPAAEEWSPWSVCSLTCGQGLQVRTRSCVSSPYGTLCSGPL FT RETRPCNNSATCPVHGVWEEWGSWSLCSRSCGRGSRSRMRTCVPPQHGGKACEGPELQT FT KLCSMAACPVEGQWLEWGPWGPCSSSCANGTQQRSRKCSVAGPAWATCAGALTDTRECS FT NLDCPATDGKWGPWNAWSLCSKTCDTGWQRRFRMCQASGTQGYPCEGTGEEVKPCSEKR FT CPAFHEMCRDEYVMLMTWKRAAAGEIIYNKCPPNASGSASRRCLLSAQGVAYWGLPSFA FT RCISHEYRYLYLSLREHLAKGQRMLAGEGMSQVVRSLQELLARRTYYSGDLLFSVDILR FT NVTDTFKRATYVPSADDVQRFFQVVSFMVDSENKDKWDDAQQVSPGSVHLLRVVEDFIH FT LVGDALKAFQSSLIVTDNLVISIQREPISAVSSDITFPMRGRRGMKDWVRHSEDRLFLP FT KEVLSLSSPGKPATPGAATAGSPGRGRGPGTVPPGPGHAHQRLLPADPEESSSYFVIGA FT VLYRTLGLILPPPRPPLAVTSRVMTVTVRPPTQPPAEPLITVELSYIINGTTDPHCASW FT DYSRADTNSGDWNTESCQTLETQAAHTRCQCQHLSTFAVLAQPPKDLTLELAGAPSVPL FT VIGCAVSCMALLTLLAIYAAFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGV FT CTMTAAFLHFFFLSSFCWVLTEAWQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSV FT GFTRTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNMLIGIIVFNKLMARDGVSDKSK FT KQRAGRLSWNLWGYGSQLCLFPKLPRASLWSSCVVLPLLALTWMSAVLAMTDRRSVLFQ FT ALFAVFNSAQGFVITAVHCFLRREVQDVVKCQMGVCRADESEDSPDSCKNGQLQILSDF FT EKDVDLACQTVLFKEVNTCNPSTITGTLSRLSLDEDEEPKSCLVGPEGGLSFSPLPGNI FT LVPMAASPGLGEPPPPQETNPVYMCGEGGLRQLDLTWIRQSEPGSEGDYMVLPRRTLSL FT QPGGGGTAGEEAPRARPEGTPRRAAKTVAHTEGYPSFLSVEHSGLGLGPAYGSLQNPYG FT MTFQPPPPTPSARQVPEPGERSRTMPRTVPGSTMKLGSLERKKLRYSDLDFEKVMHTRK FT RHSELYHELNQKFHTFDRYRSQSSAKEKPSPPGGRPGLSQHRRHQSWSTFKSMTLGSLP FT PKPRERLALHRTAAWEPTEPPDGDFQTEV" FT misc_feature 1072..1218 FT /note="TSP1; Region: Thrombospondin type 1 repeats" FT misc_feature 1396..1548 FT /note="TSP1; Region: Thrombospondin type 1 repeats" FT misc_feature 1564..1716 FT /note="TSP1; Region: Thrombospondin type 1 repeats" FT misc_feature 1723..1908 FT /note="HRM; Region: Hormone receptor domain. This FT extracellular domain contains four conserved cysteines that FT probably for disulphide bridges. The domain is found in a FT variety of hormone receptors. It may be a ligand binding FT domain" FT misc_feature 2749..2910 FT /note="GPS; Region: Latrophilin/CL-1-like GPS domain. FT Domain present in latrophilin/CL-1, sea urchin REJ and FT polycystin" FT misc_feature 2926..3732 FT /note="7tm_2; Region: 7 transmembrane receptor (Secretin FT family)" XX SQ Sequence 5155 BP; 968 A; 1642 C; 1529 G; 1016 T; 0 other; gcggagcggg agcctcgggc ctcggcgcgg ctgcggcgag ctgccctgcg cccagcccgg 60 cccccgcctt agggatggca aacttgcgcc ccgcggccgc ctccactagc gccggccccc 120 gctcctgctg ctgacggcgc ccagggcaag ggacatagga tgaccccagc ctgtcccctc 180 ttactgtctg tgattctgtc cctgcgcctg gccacggcct tcgaccctgc ccccagtgcc 240 tgctctgccc tggcctcggg cgtgctctac ggggccttct cgctgcagga cctctttccc 300 accatcgcct cgggctgctc ctggaccctg gagaacccag accccaccaa gtactccctc 360 tacctgcgct tcaaccggca ggagcaggtt tgcacacact ttgccccgcg cctgctgccc 420 ctggaccact acctggtcaa ctttacctgc ctgcggcctg gtccagagga agccacagcc 480 cgggctgagt cggaggtggg acggccagag gaggaggagg aggaggcggc ggcagcagca 540 tcagggttgg agttgtgtgg tggctcaggc ccctttacct ttctgcactt cgacaagaac 600 tttgtgcagc tgtgcctgtc ggctgagccc tctgaggccc ctcgtctgct agcgcctgct 660 gccctggcct tccgttttgt ggaggtcttg ctgatcaaca acaacaactc cagccagttc 720 acctgtggtg tgctctgccg ctggagtgag gagtgtggcc gggctgcagg cagggcttgt 780 ggctttgcac agccagggtg tagttgtcct ggggaggcag gggccaaccc cgccaccacc 840 acatctccgg ggcctccggt tgcccacacc ctgtccaatg ccctggtgcc cgggggccca 900 gcccctcctg ctgaggccga cttgcactcg gggagcagca atgacctgtt caccaccgag 960 atgagatatg gtgaggagcc ggaagaggaa ccgaaggtga aaacccagtg gccaaggtct 1020 gcagatgagc ctgggctata catggcgcag acaggcgacc cagcagctga ggagtggtcc 1080 ccgtggagcg tgtgttccct gacgtgtggg cagggtctgc aggtgcggac ccgctcctgc 1140 gtgtcctccc cctatgggac cctgtgcagc gggccccttc gggagacccg gccttgcaac 1200 aattcagcca cctgcccagt gcacggcgtg tgggaggagt gggggtcctg gagcctgtgc 1260 tcccgcagct gcgggcgggg gtctcggagc cggatgcgga cctgcgtgcc cccccagcac 1320 ggcggcaagg cctgcgaggg tcccgagctg cagactaaac tctgcagtat ggccgcctgc 1380 ccggtggaag gccagtggct agaatggggt ccctggggcc catgctcatc atcttgtgcc 1440 aatgggaccc agcagcgcag ccggaaatgc agtgtggcgg gtccagcctg ggccacgtgc 1500 gcaggtgccc tcacggatac ccgtgagtgc agcaatctcg attgcccggc cactgacggc 1560 aagtgggggc cgtggaacgc gtggagcctg tgctccaaga cgtgtgacac gggctggcaa 1620 cgccgcttcc gcatgtgcca ggcttctggc acacagggct acccttgcga gggcacagga 1680 gaggaggtga aaccctgcag tgagaagagg tgtccagcct tccatgagat gtgcagggat 1740 gagtacgtga tgttgatgac atggaagagg gcggcagctg gcgagatcat ttacaacaag 1800 tgtcccccta atgcctcggg ttctgctagc cgccgctgtc tcctcagtgc ccagggcgta 1860 gcatactggg gactgcccag ctttgctcgt tgcatatccc atgaataccg ctacctgtac 1920 ctgtcacttc gggaacacct ggctaagggc cagcgcatgc tggcaggtga gggcatgtca 1980 caggtggtgc ggagcctgca ggagctactg gcacggcgca cttactacag cggggacctg 2040 ctcttctctg tggacatcct aaggaacgtc actgacacct tcaagagggc cacctatgtc 2100 ccttccgccg atgacgtgca gcgtttcttc caggtggtga gcttcatggt ggattcagaa 2160 aacaaggaca aatgggatga tgctcagcag gtgtcaccgg gctctgtgca cctgctgcgt 2220 gttgtggaag atttcattca cctcgtgggc gacgctctca aggccttcca gagctctctc 2280 attgtcacgg acaatctggt gatcagcatt cagagagagc ctatctccgc cgtgtccagt 2340 gacatcacgt ttcccatgcg gggccgcagg ggcatgaagg actgggtgcg acactcagag 2400 gatcgtctct ttctacccaa ggaggtgctc agcctgtcct ccccaggaaa gccagccaca 2460 cctggggcag ccacagcagg cagcccgggc agggggaggg gcccaggaac ggtgccccct 2520 ggcccaggcc acgcccacca gcgccttctc ccagctgacc ccgaagagtc ctcctcctac 2580 tttgtgatcg gtgctgtgct ctaccgcacc cttggcctca tcctgccgcc ccccaggcct 2640 ccacttgctg tcacctcccg ggtgatgaca gtgactgtgc gtccccccac ccagcctcca 2700 gctgagcccc tcattacagt ggaactctcg tacatcatca atggcaccac cgatccccac 2760 tgtgccagct gggactactc cagagcagat accaactcgg gggactggaa cactgagagc 2820 tgccagacct tggagaccca ggcggctcac acccgctgcc agtgccagca cctgtccacc 2880 tttgccgtcc tggcccagcc acccaaggac ctgaccctgg agctggcagg tgctccctct 2940 gtccccctgg tgatcggctg tgcagtgtcc tgcatggctc tgctcaccct gctggccatc 3000 tatgcagcct tctggaggtt tataaaatca gaacgctcca tcatcttgct gaacttctgc 3060 ctgtccatcc tggcttccaa cattctgatc ctggtgggcc agtcccgggt gctgagcaag 3120 ggcgtatgca ccatgacggc tgccttccta cacttcttct ttctgtcctc cttttgctgg 3180 gtgcttacag aggcctggca atcctatctg gctgtcatcg ggcggatgcg cacccgcctg 3240 gttcgcaagc gcttcctctg cctgggctgg ggtctacctg ccctggtggt ggctgtgtct 3300 gttggcttta ctcgcaccaa aggatatggt acatccagct actgctggct gtccctagag 3360 ggcggcctgc tctatgcctt cgtgggtcca gcagcagtca ttgtcctggt gaacatgctc 3420 atcgggatta tcgtcttcaa caagctcatg gctcgcgatg gcgtctcaga caaatctaag 3480 aagcagaggg ctggccgact gtcttggaat ctctggggat atggctctca actgtgtctt 3540 tttccaaagc ttccaagggc ttcactctgg agttcctgcg tggtactgcc tctcctggcg 3600 cttacctgga tgtctgccgt cctggccatg acagatcgcc gctccgtcct cttccaggca 3660 ctctttgccg ttttcaactc tgcacaaggc tttgtcatca ccgctgtgca ctgcttcctg 3720 cgccgagagg tccaggatgt ggtaaagtgt cagatgggtg tgtgtcgggc tgatgagagt 3780 gaagactccc cagactcgtg caagaacggg cagctgcaga tcctgtcaga ctttgaaaag 3840 gacgtggatc tggcttgtca gacagttctg ttcaaggagg tcaacacctg caacccgtcc 3900 accattaccg gcactctgtc ccgcctgtct ctggatgagg atgaggagcc caagtcctgt 3960 ctcgtgggtc ctgagggtgg cctcagcttc tcaccactgc ctgggaacat cctggtaccc 4020 atggcagcct caccaggtct aggggagcca ccaccacccc aggagaccaa ccctgtgtac 4080 atgtgtgggg agggtggcct gcggcagttg gaccttacat ggatacggca gagtgaacca 4140 ggctctgagg gggactacat ggttctgccc cggcggactt tgagcctgca gcctggtggt 4200 gggggtacag cgggtgagga ggccccaagg gcccggcctg aggggacccc ccggcgggct 4260 gccaaaacgg tagcccacac tgaaggctac cccagcttcc tgtctgtgga gcactcgggt 4320 ctagggctgg gccctgccta tgggtctctc cagaacccgt atggaatgac cttccaacca 4380 ccaccaccaa cacccagcgc ccgccaagta ccagagccag gagaacgtag ccggaccatg 4440 ccccgtacag tgcctggttc caccatgaag ctgggctccc ttgagcgaaa gaagcttcgg 4500 tattcggact tggactttga gaaggtgatg cacactcgga aacggcactc ggaactctac 4560 cacgaactca accagaagtt ccacactttc gaccgctacc gtagccagtc ctcagccaag 4620 gagaaaccca gcccccccgg gggacgccct ggcttgtccc agcacaggag gcatcaaagc 4680 tggagcacct tcaaatctat gacactgggc tcactgcccc ccaagccccg agaacggctg 4740 gccctgcacc ggacagcagc ctgggagccc acagaaccgc cagacggcga cttccagaca 4800 gaggtgtgag tgccacgccg gactgcccac tgcacagaaa tatatatcta ttttcacact 4860 ccactttgga actaccagga gccagcgccc ctccccctcc cgaggctggg caggaggcgc 4920 agaggactca gcctggctgg gggcagccag actggcaggg cctggggggc cagggcccct 4980 ccttgttctc agaggtccct tagccaccca ctggagcctc atctttgccc cggcctgtct 5040 gtccctgtcc tgggctgggg aggggggagg gaaactttgt tgggaataaa cttcactctg 5100 tggaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa 5155 //