Dbfetch
ID BC049971; SV 1; linear; mRNA; STD; MUS; 2020 BP. XX AC BC049971; XX DT 09-APR-2003 (Rel. 75, Created) DT 24-SEP-2008 (Rel. 97, Last updated, Version 11) XX DE Mus musculus albumin, mRNA (cDNA clone MGC:59023 IMAGE:4161986), complete DE cds. XX KW MGC. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-2020 RX DOI; 10.1073/pnas.242603899. RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2020 RG NIH MGC Project RA ; RT ; RL Submitted (31-MAR-2003) to the INSDC. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR MD5; bb693b2d8ae52fc4608f03bb2bdd9da3. DR Ensembl-Gn; ENSMUSG00000029368; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0029721; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AJ_G0029687; mus_musculus_aj. DR Ensembl-Gn; MGP_AKRJ_G0029633; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0029697; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0029420; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0030151; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0028830; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0029390; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0029534; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0029493; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0029622; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0029522; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0030185; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0028549; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0028909; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000031314; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0072543; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AJ_T0072622; mus_musculus_aj. DR Ensembl-Tr; MGP_AKRJ_T0072536; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0072549; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0072192; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0073016; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0072736; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0072149; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0072280; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0072183; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0072336; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0072185; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0073230; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0072204; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0071339; mus_musculus_wsbeij. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Jeffrey E. Green, M.D. CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: National Institutes of Health Intramural CC Sequencing Center (NISC), CC Gaithersburg, Maryland; CC Web site: http://www.nisc.nih.gov/ CC Contact: nisc_mgc@nhgri.nih.gov CC Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., CC Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., CC Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., CC Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., CC Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., CC McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., CC Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., CC Young,A., Zhang,L.-H. and Green,E.D. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 108 Row: c Column: 8. CC Differences found between this sequence and the mouse C57BL/6J CC genome (build 36) are described in misc_difference features below. XX FH Key Location/Qualifiers FH FT source 1..2020 FT /organism="Mus musculus" FT /lab_host="DH10B" FT /strain="FVB/N" FT /mol_type="mRNA" FT /clone_lib="NCI_CGAP_Li9" FT /clone="MGC:59023 IMAGE:4161986" FT /tissue_type="Liver, normal. 5 month old male mouse." FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:10090" FT gene 1..2020 FT /gene="Alb" FT CDS 21..1847 FT /codon_start=1 FT /gene="Alb" FT /product="albumin" FT /db_xref="GOA:P07724" FT /db_xref="InterPro:IPR000264" FT /db_xref="InterPro:IPR014760" FT /db_xref="InterPro:IPR020857" FT /db_xref="InterPro:IPR020858" FT /db_xref="InterPro:IPR021177" FT /db_xref="MGI:MGI:87991" FT /db_xref="UniProtKB/Swiss-Prot:P07724" FT /protein_id="AAH49971.1" FT /translation="MKWVTFLLLLFVSGSAFSRGVFRREAHKSEIAHRYNDLGEQHFKG FT LVLIAFSQYLQKCSYDEHAKLVQEVTDFAKTCVADESAANCDKSLHTLFGDKLCAIPNL FT RENYGELADCCTKQEPERNECFLQHKDDNPSLPPFERPEAEAMCTSFKENPTTFMGHYL FT HEVARRHPYFYAPELLYYAEQYNEILTQCCAEADKESCLTPKLDGVKEKALVSSVRQRM FT KCSSMQKFGERAFKAWAVARLSQTFPNADFAEITKLATDLTKVNKECCHGDLLECADDR FT AELAKYMCENQATISSKLQTCCDKPLLKKAHCLSEVEHDTMPADLPAIAADFVEDQEVC FT KNYAEAKDVFLGTFLYEYSRRHPDYSVSLLLRLAKKYEATLEKCCAEANPPACYGTVLA FT EFQPLVEEPKNLVKTNCDLYEKLGEYGFQNAILVRYTQKAPQVSTPTLVEAARNLGRVG FT TKCCTLPEDQRLPCVEDYLSAILNRVCLLHEKTPVSEHVTKCCSGSLVERRPCFSALTV FT DETYVPKEFKAETFTFHSDICTLPEKEKQIKKQTALAELVKHKPKATAEQLKTVMDDFA FT QFLDTCCKAADKDTCFSTEGPNLVTRCKDALA" FT misc_difference 2004..2020 FT /gene="Alb" FT /note="polyA tail: 17 bases do not align to the mouse FT genome." XX SQ Sequence 2020 BP; 583 A; 490 C; 465 G; 482 T; 0 other; ccccactagc ctctggcaaa atgaagtggg taacctttct cctcctcctc ttcgtctccg 60 gctctgcttt ttccaggggt gtgtttcgcc gagaagcaca caagagtgag atcgcccatc 120 ggtataatga tttgggagaa caacatttca aaggcctagt cctgattgcc ttttcccagt 180 atctccagaa atgctcatac gatgagcatg ccaaattagt gcaggaagta acagactttg 240 caaagacgtg tgttgccgat gagtctgccg ccaactgtga caaatccctt cacactcttt 300 ttggagataa gttgtgtgcc attccaaacc tccgtgaaaa ctatggtgaa ctggctgact 360 gctgtacaaa acaagagccc gaaagaaacg aatgtttcct gcaacacaaa gatgacaacc 420 ccagcctgcc accatttgaa aggccagagg ctgaggccat gtgcacctcc tttaaggaaa 480 acccaaccac ctttatggga cactatttgc atgaagttgc cagaagacat ccttatttct 540 atgccccaga acttctttac tatgctgagc agtacaatga gattctgacc cagtgttgtg 600 cagaggctga caaggaaagc tgcctgaccc cgaagcttga tggtgtgaag gagaaagcat 660 tggtctcatc tgtccgtcag agaatgaagt gctccagtat gcagaagttt ggagagagag 720 cttttaaagc atgggcagta gctcgtctga gccagacatt ccccaatgct gactttgcag 780 aaatcaccaa attggcaaca gacctgacca aagtcaacaa ggagtgctgc catggtgacc 840 tgctggaatg cgcagatgac agggcggaac ttgccaagta catgtgtgaa aaccaggcga 900 ctatctccag caaactgcag acttgctgcg ataaaccact gttgaagaaa gcccactgtc 960 ttagtgaggt ggagcatgac accatgcctg ctgatctgcc tgccattgct gctgattttg 1020 ttgaggacca ggaagtgtgc aagaactatg ctgaggccaa ggatgtcttc ctgggcacgt 1080 tcttgtatga atattcaaga agacaccctg attactctgt atccctgttg ctgagacttg 1140 ctaagaaata tgaagccact ctggaaaagt gctgcgctga agccaatcct cccgcatgct 1200 acggcacagt gcttgctgaa tttcagcctc ttgtagaaga gcctaagaac ttggtcaaaa 1260 ccaactgtga tctttacgag aagcttggag aatatggatt ccaaaatgcc attctagttc 1320 gctacaccca gaaagcacct caggtgtcaa ccccaactct cgtggaggct gcaagaaacc 1380 taggaagagt gggcaccaag tgttgtacac ttcctgaaga tcagagactg ccttgtgtgg 1440 aagactatct gtctgcaatc ctgaaccgtg tgtgtctgct gcatgagaag accccagtga 1500 gtgagcatgt taccaagtgc tgtagtggat ccctggtgga aaggcggcca tgcttctctg 1560 ctctgacagt tgatgaaaca tatgtcccca aagagtttaa agctgagacc ttcaccttcc 1620 actctgatat ctgcacactt ccagagaagg agaagcagat taagaaacaa acggctcttg 1680 ctgagctggt gaagcacaag cccaaggcta cagcggagca actgaagact gtcatggatg 1740 actttgcaca gttcctggat acatgttgca aggctgctga caaggacacc tgcttctcga 1800 ctgagggtcc aaaccttgtc actagatgca aagacgcctt agcctaaaca catcacaacc 1860 acaaccttct caggctaccc tgagaaaaaa agacatgaag actcaggact catcttttct 1920 gttggtgtaa aatcaacacc ctaaggaaca caaatttctt taaacatttg acttcttgtc 1980 tctgtgctgc aattaataaa aaaaaaaaaa aaaaaaaaaa 2020 //