Dbfetch
ID BC034092; SV 1; linear; mRNA; STD; MUS; 3623 BP. XX AC BC034092; XX DT 09-JUL-2002 (Rel. 72, Created) DT 24-SEP-2008 (Rel. 97, Last updated, Version 9) XX DE Mus musculus membrane metallo endopeptidase, mRNA (cDNA clone MGC:31469 DE IMAGE:4483558), complete cds. XX KW MGC. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-3623 RX DOI; 10.1073/pnas.242603899. RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-3623 RA Strausberg R.; RT ; RL Submitted (02-JUL-2002) to the INSDC. RL National Institutes of Health, Mammalian Gene Collection (MGC), Cancer RL Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, RL Bethesda, MD 20892-2590, USA XX DR MD5; 59bf1057ae5b38c25e6bdc8382be75cf. DR Ensembl-Gn; ENSMUSG00000027820; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0027261; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AJ_G0027221; mus_musculus_aj. DR Ensembl-Gn; MGP_AKRJ_G0027191; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0027234; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0026977; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0027680; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0026429; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0026953; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0027087; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0027055; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0027198; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0027072; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0027738; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0026161; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0026503; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000029400; mus_musculus. DR Ensembl-Tr; ENSMUST00000194134; mus_musculus. DR Ensembl-Tr; ENSMUST00000194150; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0061036; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AJ_T0061054; mus_musculus_aj. DR Ensembl-Tr; MGP_AKRJ_T0060989; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0060981; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0060673; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0061459; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0060974; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0060651; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0060742; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0060733; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0060895; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0060700; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0061646; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0060528; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0059953; mus_musculus_wsbeij. DR EuropePMC; PMC1851605; 17389375. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Gilbert Smith, Ph.D. CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 44 Row: b Column: 5 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 6678889. XX FH Key Location/Qualifiers FH FT source 1..3623 FT /organism="Mus musculus" FT /lab_host="DH10B" FT /strain="FVB/N" FT /mol_type="mRNA" FT /clone_lib="NCI_CGAP_Mam1" FT /clone="MGC:31469 IMAGE:4483558" FT /tissue_type="Mammary tumor. Metallothionien-TGF alpha FT model. 10 month old virgin mouse. Taken by biopsy." FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:10090" FT gene 1..3623 FT /gene="Mme" FT /note="synonyms: NEP, CD10, CALLA, 6030454K05Rik" FT CDS 111..2363 FT /codon_start=1 FT /product="Mme protein" FT /db_xref="GOA:Q61391" FT /db_xref="InterPro:IPR000718" FT /db_xref="InterPro:IPR008753" FT /db_xref="InterPro:IPR018497" FT /db_xref="InterPro:IPR024079" FT /db_xref="InterPro:IPR029727" FT /db_xref="InterPro:IPR042089" FT /db_xref="MGI:MGI:97004" FT /db_xref="PDB:2YVC" FT /db_xref="UniProtKB/Swiss-Prot:Q61391" FT /protein_id="AAH34092.1" FT /translation="MGRSESQMDITDINAPKPKKKQRWTPLEISLSVLVLLLTIIAVTM FT IALYATYDDGICKSSDCIKSAARLIQNMDASVEPCTDFFKYACGGWLKRNVIPETSSRY FT SNFDILRDELEVILKDVLQEPKTEDIVAVQKAKTLYRSCINESAIDSRGGQPLLKLLPD FT IYGWPVASDNWDQTYGTSWTAEKSIAQLNSKYGKKVLINFFVGTDDKNSTQHIIHFDQP FT RLGLPSRDYYECTGIYKEACTAYVDFMISVARLIRQEQSLPIDENQLSLEMNKVMELEK FT EIANATTKPEDRNDPMLLYNKMTLAKLQNNFSLEVNGKSFSWSNFTNEIMSTVNINIQN FT EEEVVVYAPEYLTKLKPILTKYSPRDLQNLMSWRFIMDLVSSLSRNYKESRNAFRKALY FT GTTSETATWRRCANYVNGNMENAVGRLYVEAAFAGESKHVVEDLIAQIREVFIQTLDDL FT TWMDAETKKKAEEKALAIKERIGYPDDIISNENKLNNEYLELNYREDEYFENIIQNLKF FT SQSKQLKKLREKVDKDEWISGAAVVNAFYSSGRNQIVFPAGILQPPFFSAQQSNSLNYG FT GIGMVIGHEITHGFDDNGRNFNKDGDLVDWWTQQSANNFKDQSQCMVYQYGNFSWDLAG FT GQHLNGINTLGENIADNGGIGQAYRAYQNYVKKNGEEKLLPGLDLNHKQLFFLNFAQVW FT CGTYRPEYAVNSIKTDVHSPGNFRIIGTLQNSAEFADAFHCRKNSYMNPERKCRVW" FT misc_feature 324..2360 FT /note="PepO; Region: Predicted metalloendopeptidase FT [Posttranslational modification, protein turnover, FT chaperones]" XX SQ Sequence 3623 BP; 1259 A; 679 C; 732 G; 953 T; 0 other; gtgaccgaga gcagcgctgc caaattgcac cggggttcat ttgggggctg ggaattggcc 60 attccgctgt acagacactg tttttatttt aaaaaacaag attttaggtg atgggaagat 120 cagaaagtca gatggatata actgatatca atgctccaaa gccaaagaag aaacagcgat 180 ggactcccct ggagatcagc ctctctgtgc ttgtcttgct cctgactatc atagcggtga 240 caatgatcgc tctctatgca acctatgatg atggcatttg caaatcatca gactgcataa 300 aatcagctgc tcgactgatt cagaatatgg atgcctctgt tgagccatgt acagacttct 360 tcaagtatgc ttgtggaggc tggttgaaac gcaacgtcat tcccgagacc agttcccgat 420 acagtaattt tgacatttta agagatgagc tagaagtcat tttgaaagat gtccttcaag 480 aacccaaaac tgaagacata gtagcagtgc agaaagcaaa aaccttgtac agatcgtgta 540 taaatgagtc tgctattgat agcagaggcg gacaacctct actcaaactg ttaccagata 600 tatatgggtg gccagtagca tcagataact gggatcaaac atatggcact tcttggacag 660 ctgagaaatc cattgcacaa ctgaattcta aatatgggaa aaaggtcctc attaattttt 720 ttgttggcac tgatgataag aattctaccc agcatataat tcattttgac cagcctcgac 780 ttggcctccc ttccagagac tactatgagt gcactggaat atataaagag gcttgcacag 840 catatgtgga ttttatgatt tctgtggcca gactgattcg tcaggaacaa agtttgccta 900 ttgatgaaaa ccagctctct ttggaaatga ataaagttat ggaattggaa aaagaaattg 960 ccaatgctac aactaaacca gaagaccgaa atgacccaat gctgctttat aacaaaatga 1020 cattggccaa gctgcagaac aacttttccc tggaggtcaa tgggaagtca ttcagctggt 1080 caaatttcac aaatgaaatc atgtcaactg tgaatattaa tattcaaaat gaggaagaag 1140 ttgttgtcta tgctccagaa tatttaacca aacttaagcc tattcttacc aaatattctc 1200 ccagagatct tcaaaattta atgtcctgga ggttcataat ggatcttgta agcagcctca 1260 gccgaaacta caaggagtcc agaaatgctt tccgcaaggc cctttatggg actacatcag 1320 aaactgcaac atggagacgg tgtgctaact acgtcaatgg gaatatggag aatgctgtgg 1380 ggaggcttta tgtggaagcg gcttttgctg gagagagcaa gcacgtggtt gaagacttga 1440 ttgcacaaat ccgggaagtt tttattcaga ctttggatga ccttacttgg atggatgctg 1500 agacaaaaaa gaaagctgaa gaaaaggcct tggcaattaa agaaaggatt ggctatcctg 1560 atgacatcat ttccaatgag aacaaactga ataatgagta tcttgagttg aactacaggg 1620 aagatgaata ctttgagaac ataattcaaa atttgaaatt cagccaaagc aagcagctaa 1680 agaagctccg agaaaaagtg gacaaagatg agtggataag tggagcagct gtagtcaatg 1740 cattttattc ctcaggccga aatcagatag tcttccccgc tggcattttg cagcccccat 1800 tcttcagtgc tcagcaatcc aactcattga actatggggg catcggcatg gtcattggac 1860 atgaaatcac acatggattt gatgacaatg gaagaaattt caataaagat ggagacctcg 1920 ttgactggtg gacgcagcag tcggcaaata attttaaaga ccaatcccag tgtatggtat 1980 accagtatgg aaacttttcc tgggacctag caggtggaca gcatctcaat ggaattaata 2040 cactaggaga aaacattgct gataatggag gtattggcca agcatacaga gcctatcaga 2100 attatgttaa aaagaatggt gaagaaaaat tactccctgg acttgacctc aatcacaaac 2160 aactattttt cctgaacttt gcccaggtgt ggtgtgggac ctaccggcca gagtatgcag 2220 tcaattctat taaaacagat gtacacagtc ctggaaattt caggatcatt gggactttgc 2280 agaactctgc cgagtttgca gatgcctttc attgccgcaa gaattcatac atgaatccag 2340 aaaggaaatg tcgggtttgg tgatcttcac aagatactga acatccacgg caagatttgc 2400 caaagccacg gaaacaggaa ctcttccctc agagaaactg ggccccggaa gtttcttcag 2460 cttcctgggg ggcaattcac agagacgagc atgagctaac ataaatgaaa ttagattatt 2520 aaatctgctg tgaatgaaag gggagggagc ctacgatcta gcaaatcaat cacttcactg 2580 tgtaaataat gattactttc caacggtagt actaccgttc acttctgttt ctcacacaga 2640 ctgcagcttt catgttgtct gtagagagga gtgttaacac ttaaagcaga ctatgacttc 2700 tgatcaaaaa gaggacgatg ctcagtacag cagggcacca aagcacagat ttgcccctca 2760 gcactcactt ttgtttgcaa cattcatgct ccttccaaac tctcccaaag aactcccata 2820 cagactgtgg ccttcaggct cgtgcagttt tgaactcatt ttaccataca taagttattc 2880 attcattcca catcaattta gtttgaacac tcttagagct taaactagag tatctgaaac 2940 ggttccccta tttcacccac tttagtgatg ttgagattct tgaacccccc tgcagatctt 3000 tgagcaattt cttgctcttg ctgcccctca gactcagtct tttaaaggat ttgtagtaat 3060 gtataaagaa taattctata tttaattatt aactacattt atgactgaat aaaccattgc 3120 tataggtaat cattgaatat tgaagttata tggccaagat agttttgaag atctgtaaca 3180 tgatatacag acaaaaattt gagactcttt aaatctgtaa atcatattga tgaaaagctt 3240 taagtacaaa ctctgggggt gagcattacc attggacggg tgtcttgaga tacataatag 3300 ttgtggttta caaacagcat tttcaagatt aagtctgtcc ctagtggcta agaaagggtc 3360 taactgtatc tgtgttgctc catgaatgct tagccttcag gtttgtcatc aaatgaaaat 3420 attttgataa taaattgacg ttgtgagccc cttaaaaaaa aaaaaaaaaa aaaaaaaaaa 3480 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3540 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3600 aaaaaaaaaa aaaaaaaaaa aaa 3623 //