Dbfetch
ID BC034064; SV 1; linear; mRNA; STD; MUS; 2869 BP. XX AC BC034064; XX DT 09-JUL-2002 (Rel. 72, Created) DT 24-SEP-2008 (Rel. 97, Last updated, Version 7) XX DE Mus musculus guanylate cyclase 2c, mRNA (cDNA clone IMAGE:4208530), partial DE cds. XX KW . XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-2869 RX DOI; 10.1073/pnas.242603899. RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2869 RA Strausberg R.; RT ; RL Submitted (02-JUL-2002) to the INSDC. RL National Institutes of Health, Mammalian Gene Collection (MGC), Cancer RL Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, RL Bethesda, MD 20892-2590, USA XX DR MD5; 2ca620fae996a5df66196b644eb95014. DR Ensembl-Gn; ENSMUSG00000042638; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0031424; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AJ_G0031400; mus_musculus_aj. DR Ensembl-Gn; MGP_AKRJ_G0031327; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0031407; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0031128; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0031867; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0030497; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0031087; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0031245; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0031195; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0031329; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0031235; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0031899; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0030223; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0030588; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000032338; mus_musculus. DR Ensembl-Tr; ENSMUST00000078095; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0080655; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AJ_T0080744; mus_musculus_aj. DR Ensembl-Tr; MGP_AKRJ_T0080667; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0080682; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0080295; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0081154; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0080851; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0080242; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0080402; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0080283; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0080433; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0080301; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0081422; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0080286; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0079376; mus_musculus_wsbeij. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Jeffrey E. Green, M.D. CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 43 Row: h Column: 12 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: Hexamer frequency ORF CC analysis. XX FH Key Location/Qualifiers FH FT source 1..2869 FT /organism="Mus musculus" FT /lab_host="DH10B" FT /strain="FVB/N" FT /mol_type="mRNA" FT /clone_lib="NCI_CGAP_Co24" FT /clone="IMAGE:4208530" FT /tissue_type="Colon, normal. 5 month old male mouse." FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:10090" FT CDS <1..2265 FT /codon_start=1 FT /gene="Gucy2c" FT /product="Gucy2c protein" FT /db_xref="GOA:Q3UWA6" FT /db_xref="InterPro:IPR000719" FT /db_xref="InterPro:IPR001054" FT /db_xref="InterPro:IPR001245" FT /db_xref="InterPro:IPR001828" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR018297" FT /db_xref="InterPro:IPR028082" FT /db_xref="InterPro:IPR029787" FT /db_xref="MGI:MGI:106903" FT /db_xref="UniProtKB/Swiss-Prot:Q3UWA6" FT /protein_id="AAH34064.1" FT /translation="SDFSLAYLEGTLLFGHMLQTFLENGENVTGPKFARAFRNLTFQGF FT AGPVTLDDSGDIDNIMSFLYVSLDTRKYKVLMKYDTHKNKTIPVAENPNFIWKNHKLPN FT DVPGLGPQILMIAVFTLTGILVVLLLIALLVLRKYRRDHALRQKKWSHIPSENIFPLET FT NETNHISLKIDDDRRRDTIQRVRQCKYDKKKVILKDLKHSDGNFSEKQKIDLNKLLQSD FT YYNLTKFYGTVKLDTRIFGVVEYCERGSLREVLNDTISYPDGTFMDWEFKISVLNDIAK FT GMSYLHSSKIEVHGRLKSTNCVVDSRMVVKITDFGCNSILPPKKDLWTAPEHLRQATIS FT QKGDVYSFAIIAQEIILRKETFYTLSCRDHNEKIFRVENSYGKPFRPDLFLETADEKEL FT EVYLLVKSCWEEDPEKRPDFKKIESTLAKIFGLFHDQKNESYMDTLIRRLQLYSRNLEH FT LVEERTQLYKAERDRADHLNFMLLPRLVVKSLKEKGIVEPELYEEVTIYFSDIVGFTTI FT CKYSTPMEVVDMLNDIYKSFDQIVDHHDVYKVETIGDAYVVASGLPMRNGNRHAVDISK FT MALDILSFIGTFELEHLPGLPVWIRIGVHSGPCAAGVVGIKMPRYCLFGDTVNTASRME FT STGLPLRIHMSSSTIAILKRTDCQFLYEVRGETYLKGRGTETTYWLTGMKDQEYNLPSP FT PTVENQQRLQTEFSDMIVSALQKRQASGKKSRRPTRVASYKKGFLEYMQLNNSDHDSTY FT F" XX SQ Sequence 2869 BP; 780 A; 681 C; 724 G; 684 T; 0 other; agtgactttt ctctcgctta cttggaggga accttgctat ttggacacat gctgcagacg 60 tttcttgaaa atggagaaaa tgtcacgggt cccaagtttg ctcgtgcatt caggaatctc 120 acttttcaag gctttgcagg acctgtgact ctggatgaca gtggggacat tgacaacatt 180 atgtcctttc tgtatgtgtc tctggatacc aggaaataca aggttcttat gaagtacgac 240 acccacaaaa acaaaactat tccggtggct gagaacccca acttcatctg gaagaaccac 300 aagctcccca atgacgttcc tgggctgggc cctcaaatcc tgatgattgc tgtcttcacg 360 ctcacgggga tcctggtagt tctgctgctg attgccctcc ttgtgctgag aaaatacaga 420 agagatcatg cacttcgaca gaagaaatgg tcccacattc cttctgaaaa catctttcct 480 ctagagacca acgagaccaa ccacatcagc ctgaagattg acgatgacag gagacgagac 540 acaatccaga gagtgcgaca gtgcaaatac gacaagaaga aagtgattct gaaagacctc 600 aagcacagtg acgggaactt cagtgagaag cagaagatag acctgaacaa gttgctgcaa 660 tctgactact acaacttgac caagttctac ggcaccgtga agctggacac caggatcttt 720 ggggtggttg agtactgcga gaggggatcc ctccgggaag tgttaaacga cacaatttcc 780 taccctgacg gcacgttcat ggattgggag tttaagatct ctgtcttaaa tgacatcgct 840 aaggggatgt cctacctgca ctccagtaag attgaagtcc acgggcgtct caaatccacc 900 aactgcgtgg tggacagccg catggtggtg aagatcaccg actttgggtg caattccatc 960 ctgcctccaa agaaagacct gtggacggcc ccggagcacc tgcgccaggc caccatctct 1020 cagaaaggag acgtgtacag cttcgccatc attgcccagg agatcatcct ccgtaaggag 1080 actttctaca cgctgagctg tcgggatcac aatgagaaga ttttcagagt ggaaaattca 1140 tatgggaaac ctttccgccc agacctcttc ctggaaactg cagatgagaa ggagctggag 1200 gtctatctac ttgtcaaaag ctgttgggag gaggatccag aaaagaggcc agatttcaag 1260 aaaatcgaga gcacactggc caagatattt ggccttttcc atgaccagaa aaacgagtct 1320 tacatggaca ccttgatccg acgtctccag ctgtactctc gaaacctgga acatctggtg 1380 gaggaaagga ctcagctgta caaggcggag agggacaggg ctgaccacct taacttcatg 1440 ctcctcccac ggctggtggt aaagtcactg aaggagaaag gcatcgtgga gccagagctg 1500 tacgaagaag tcacaatcta cttcagtgac attgtgggct tcaccaccat ctgcaagtat 1560 agcacaccca tggaggtggt ggacatgctc aacgacatct acaagagctt tgaccagatt 1620 gtggaccacc atgacgtcta caaggtagaa accatcggtg acgcctacgt ggtggccagc 1680 ggtctgccta tgagaaacgg caaccgacac gcggtagaca tttccaagat ggccttggac 1740 atcctcagct tcatagggac ctttgagttg gagcatctcc ctggcctccc cgtgtggatc 1800 cgcattggag ttcattctgg cccctgcgct gctggtgttg tggggatcaa gatgcctcgc 1860 tattgcctgt ttggagacac tgtcaacact gcctccagga tggaatccac cggcctcccc 1920 ttgaggattc acatgagcag ctccaccata gccatcctga agagaacgga ttgtcagttc 1980 ctgtatgaag tgaggggaga aacatactta aagggaagag ggacagaaac cacatactgg 2040 ctgactggga tgaaggacca agaatacaac ctgccatccc caccgacagt ggagaaccaa 2100 cagcgcctgc agactgagtt ctcagacatg atcgttagcg ccttacagaa aagacaggcc 2160 tcgggcaaga agagccggag gcccactcgg gtggccagct ataagaaagg ctttctggaa 2220 tacatgcagc tgaacaattc agaccacgat agcacctatt tttagaccaa gtgaggtctg 2280 agaactgaca gtagcaacct cctatatcat gaatctgtat tttccagaga cctcaacaac 2340 acaggcaagc gcttagcctc agtgccctgc ctggaacgta gaaccaaccc ctcaagtcat 2400 gtgggtgttc tgattttggg ttggtggttg gttggttggt tggttggttt tggttttgtt 2460 gagacagagt ttcgtgtatc ccaagctggc ctcaaaccca ctgtgtagca gcagatgacc 2520 ttggacttct aagatcatcc gtgtgtgttc ctgacagtgt gatgagtgta taggtcagag 2580 ccctgtccca cagttctcca tggagcatca acctgaattg aggagcgagg aggggaatgt 2640 cctgtgctgt acagaacttg gggttttgtt ctaatttcat ctctggtttg gttttgtttt 2700 ctggctcctt ccctctctat gtgtgagaga agtttttaaa ttgtctgaat tgtatgctaa 2760 gtagcttatc tccaagaaag tgtgtttaac tagtgatttt tgcagaaacc atgctggata 2820 ttaggtaaaa aaataaaagt gtttagagtc tgaaaaaaaa aaaaaaaaa 2869 //