Dbfetch
ID AY528242; SV 1; linear; mRNA; STD; MUS; 4486 BP. XX AC AY528242; XX DT 08-MAR-2004 (Rel. 79, Created) DT 18-NOV-2008 (Rel. 97, Last updated, Version 4) XX DE Mus musculus neuronal cell adhesion molecule short isoform (Nrcam) mRNA, DE complete cds, alternatively spliced. XX KW . XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RC Publication Status: Available-Online prior to print RP 1-4486 RX PUBMED; 16123759. RA Ishiguro H., Liu Q.R., Gong J.P., Hall F.S., Ujike H., Morales M., RA Sakurai T., Grumet M., Uhl G.R.; RT "NrCAM in Addiction Vulnerability: Positional Cloning, Drug-Regulation, RT Haplotype-Specific Expression, and Altered Drug Reward in Knockout Mice"; RL Neuropsychopharmacology 0:0(2005). XX RN [2] RP 1-4486 RA Liu Q.-R., Uhl G.R.; RT ; RL Submitted (16-JAN-2004) to the INSDC. RL Molecular Neurobiology Branch, National Institute on Drug Abuse/NIH, 333 RL Cassell Drive, Baltimore, MD 21224, USA XX DR MD5; 92ab2bed4cdfa8b8cc9385c569935f46. XX FH Key Location/Qualifiers FH FT source 1..4486 FT /organism="Mus musculus" FT /chromosome="12" FT /map="12A3" FT /strain="C57BL/6J" FT /mol_type="mRNA" FT /db_xref="taxon:10090" FT gene 1..4486 FT /gene="Nrcam" FT CDS 570..1106 FT /codon_start=1 FT /gene="Nrcam" FT /product="neuronal cell adhesion molecule short isoform" FT /note="NrCAM; alternatively spliced" FT /db_xref="GOA:Q6QRP1" FT /db_xref="InterPro:IPR026966" FT /db_xref="MGI:MGI:104750" FT /db_xref="UniProtKB/TrEMBL:Q6QRP1" FT /protein_id="AAS48508.1" FT /translation="MPGTAYKVRVGAEGDSGFVSSEDVFETGPAMASRQVDIATQGWFI FT GLMCAVALLILILLIVCFIRRNKGGKYPVKEKEDAHADPEIQPMKEDDGTFGEYSDAED FT HKPLKKGSRTPSDRTVKKEDSDDSLVDYGEGVNGQFNEDGSFIGQYSGKKEKEPAEGNE FT SSEAPSPVNAMNSFV" FT regulatory 2536..2541 FT /gene="Nrcam" FT /regulatory_class="polyA_signal_sequence" FT polyA_site 2569 FT /gene="Nrcam" FT regulatory 2664..2669 FT /gene="Nrcam" FT /regulatory_class="polyA_signal_sequence" FT polyA_site 2694 FT /gene="Nrcam" FT regulatory 3213..3218 FT /gene="Nrcam" FT /regulatory_class="polyA_signal_sequence" FT polyA_site 3228 FT /gene="Nrcam" FT regulatory 4471..4476 FT /gene="Nrcam" FT /regulatory_class="polyA_signal_sequence" FT polyA_site 4486 FT /gene="Nrcam" XX SQ Sequence 4486 BP; 1283 A; 945 C; 970 G; 1288 T; 0 other; ttcttcttga cctttggtag atcatgtttg accacagcat ttgtacctgt tcctctaaaa 60 tatgctaact attcaacatt atctaatgtg tgagtttctc agcttttaag attctctggc 120 tgtgacttaa aataagtcag aagtcactat tatagaaaat attctttctc ctcccagggt 180 aaattctctg aatacctgca attagaagcc aaataaaatg gaaaagtacc caaagtacct 240 ggaagtctct gatacactct aatagcttct gttctcagga cagttcatca atccccggat 300 gtccatcagt aaatgaagat ggcgatgttt attgggactg gacctaatgg gaagcagttt 360 acattactca gaaaacattc cgtgcagtaa accccaggat cagcaatctc actgccacag 420 ctgccgagac gtatgccaat atcacttggg agtatgaggg accaggacat gtgacgtttt 480 atgttgaata tggtgtagca ggcagcaaag aagaatggag gaaagaaatt gtaaatggtt 540 ctcgaagctt ctttgggtta aagggtctaa tgccaggaac agcatacaaa gttcgagttg 600 gtgctgaggg ggactctggt tttgtgagtt cagaggatgt gtttgagaca ggaccagcaa 660 tggcaagccg gcaagtggat atcgcgaccc aaggctggtt cataggtcta atgtgcgctg 720 ttgctctcct catcttaatt ttgctgattg tttgcttcat cagaagaaac aaaggtggta 780 aatacccagt taaagaaaag gaggatgctc atgcagaccc tgaaatccag cccatgaagg 840 aagatgatgg gacgtttgga gaatacagtg atgcagaaga tcacaagcct ttgaaaaaag 900 gaagtcgaac accttcagac aggactgtga aaaaagaaga tagcgatgat agtctggttg 960 actatggaga gggggtgaac ggccaattca acgaggatgg ctcctttatt ggccaataca 1020 gtggtaagaa agagaaagag ccagcagagg gaaatgaaag ctcagaggcc ccttctcctg 1080 tcaacgcgat gaactccttt gtttaagtct ttaagctctc tgccaatgtc taatctctct 1140 ggaatggttt tcctgaacac ctgtcatccc tctcatacta cggacatatg ggtagaaaga 1200 atgttttttc cggtatatga gtattatgag accagagcaa gaacatgact cagtcaaatg 1260 atacattaat atgaactggg gtgcaaagtg catacgtttt tgttcagagt ggggtttttc 1320 tcaatttcct tggaactgat taaaaagaaa tacaaacatc atcaatagat tacattattc 1380 cctgtgcggg atccagttca atacgatgca tgagacatgc tgcacagagg acacacctgt 1440 gtatgtgact gcgatgtggt tgggtacttt gttggcacta tcctcagctg atccctaaat 1500 atgaattccg ttgtcattgt gaagagtgtt gctgtagtgt tctctagagc ttcaatgtct 1560 ctgtggacat tgttgttaaa ctcgtgacta tgtctagctg gtgttagtct ttttgagaga 1620 ctattaggaa cagtgtgtac agtatatact tgctacatga gttacttatg acagttgcat 1680 ccactaatgc tcgctgagac tctgaaacct gttctttgct cccggacctt cctaggcttt 1740 ttatccttcc gggtgtcaca gcagcagagt cccacttact atactatctg cgttcagtcc 1800 tttggggggc ataaacattg cgtattgtga cacctgctgg catttgtgcc ctactcaaag 1860 aattgaagtc aaagctctca agtgaaattt taaattttag ttcagaaaat gcagggcaag 1920 acacacgcag tgccttcaga caattagcat tccctgactc ctgtactctg tatcagccag 1980 tgtgggcaac ttcatcctac gctactgttg ttggaaagga acttttccaa ggcagagata 2040 attcgaactg aaactgggag cataggaaca actttatttg aagtggtgtt ccccacacaa 2100 atatcaggcc tccaaagctc tgtcattgtc gggtgtacag gatggttttg ttgtcttttg 2160 tggtttctag ccaaacaagt caagttgaaa aaaggaaaaa atggtatggt tggaaatgga 2220 tagaaaaccc aatgattgca gaagtaaaag cgtacaacag catgcctaaa gtactaaatg 2280 attcactctg cctagacaag ctttcaaatt ccgcagcatt cagcaacgtg tatgcaaatt 2340 gcaacaggca cactccagaa cctgagaaac ctgaccagtg cttaattagg ccagcagtca 2400 aagagattac acctcgagtc taaagaacaa tactatatcc tatcatagcc ataaacaatg 2460 tgtgtgaaat ggcttacctc caatatagaa acctatgacc acctatggtt gaagggatgc 2520 tcagtttcat ttgccaataa attggtttct cataacttgc atcaagttta attttaagta 2580 aagcctttta tatgtaggta ttctgttgaa tttgtaaata tacttagagt gtagaagcta 2640 tatgctcata ggtattacgt gcaaataaac atgcaatcaa tgtttatgtt ctcctgtgtg 2700 agaagcaggc tagttgatga atgtagtagt atgtgggacg aggaaacatc caaatgtctt 2760 tcgtggtgtt tcggatttaa tttttttccc cactctattt ttgtttgtga aactgaaata 2820 gtgaactccg tgccccccac ccctttcttc agcctgttgc tggctgaaag cctcagtgtt 2880 ttgccaatgg agtacattag ggtttgccac ctgacacctt tgatgtgtac aggtaaagct 2940 tgttttaaag tgattcccca aatgaagtgg ccctaaatac tctcatcttt tcatattcac 3000 tctccacaaa ctagcctatc gattgaaaat acaaaataac acacaggctt gcctcaacat 3060 aacaaagcac aaagacaaaa gttcctttca agtcatcaat gccttcagtg aaagacaaat 3120 gtgaagtctc tgctcatcta taactatgga tgctaaattt ctctgtgcat gaagaagtca 3180 cgcctgtaga taactacaga ttttctatta aaaatgaaaa attgagtgtg gttttaaagc 3240 cccccccccc cactccttgt acttagtcat gttccctggg ggggggggtg gggggagggt 3300 gggtgtgtag caggtgtacc cggcagcaca atgcttgtgg acttccatct gaaaagggaa 3360 tggtaaacag cccagctctc ctcagtttca ggttcttcaa acctgtactt ccaaagattt 3420 ttgaacaaat tcagacaatt ttgtttcgtt tttaaaaaga ctttggattt tatcgccaac 3480 gtaaaaataa gaattagaat caggaattat tttttttttt ccgagacagg gtttctctgt 3540 gtagtcttgg ctgtcctgga actcattctg cagaccaggc tggcctggaa ctcagaaatc 3600 tgcctgcctc tgcttcccaa gtgctgggaa aggcgtgagc caccaccgcc cggtgaaatc 3660 aggaactttt aaatcaaagg ttagggctag ttacgcagga atagatagca agagtccttt 3720 gaaaacaggt gaacaaatct ggttcctttg tcgagtctca caatagacca actgctggtg 3780 ccctgtccat acaaccagtg ggacctcctc gctactcagc catggtcaat ttatatttct 3840 taacatggct acatgatgag agtttgaaca ctcatacata ttacaaatat gtcatctgct 3900 tccttttctc caccttcatt cttctgtctc catccaagcc tagcaattat ccacattcca 3960 ccacttgccc cttggtcact gacccctggt cccagcagtg catccaggag aactacctgc 4020 cttgtgctct cagagttatt tagacagcat gctatgaaag tgaatcggag atgccataga 4080 gagagagctc agaattcctc tcacagagga catgttggct gctttctcgg accctccctt 4140 ctgtcctcac tgtgggccaa attaacaaac cttagcctca ctctacatca tgacacggct 4200 ccgtggcaac aggaactttg aaactttaag catgacctca gaaaaaatct tgtagttata 4260 aacctttata aaccatcttc ttcattgggt tttaaggact ttcgaggtaa ggggagtcta 4320 agaactcagg gattttcagt cacaaaatga gtcacttccg cttgagatgt ttccgcagct 4380 gaccaccaga gggcgcctgt gctttatcct gcgtcgaaga aacttgctag agaaagcagg 4440 ctaatgaccc tggctggatc ggttttggat aattaaatga tgaccc 4486 //