Dbfetch
ID AY243585; SV 1; linear; mRNA; STD; MUS; 1769 BP. XX AC AY243585; XX DT 02-JUL-2003 (Rel. 76, Created) DT 18-NOV-2008 (Rel. 97, Last updated, Version 4) XX DE Mus musculus strain 129S1/SvImJ peroxisome proliferator-activated receptor DE gamma transcript 2 (Pparg) mRNA, complete cds. XX KW . XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RC Publication Status: Online-Only RP 1-1769 RX PUBMED; 12837957. RA Lyons M.A., Wittenburg H., Li R., Walsh K.A., Leonard M.R., Churchill G.A., RA Carey M.C., Paigen B.; RT "New quantitative trait loci that contribute to cholesterol gallstone RT formation detected in an intercross of CAST/Ei and 129S1/SvImJ inbred RT mice"; RL Physiol. Genomics 14(3):225-239(2003). XX RN [2] RP 1-1769 RA Lyons M.A., Wittenburg H., Walsh K.A., Carey M.C., Paigen B.; RT ; RL Submitted (25-FEB-2003) to the INSDC. RL The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA XX DR MD5; 7c8e9cfb3985762f1e02e6b87e81a2d6. DR Ensembl-Gn; ENSMUSG00000000440; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0031148; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AJ_G0031117; mus_musculus_aj. DR Ensembl-Gn; MGP_AKRJ_G0031048; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0031128; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0030580; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0031587; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0030235; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0030814; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0030967; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0030921; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0031047; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0030955; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0031614; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0029951; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0030319; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000000450; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0079461; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AJ_T0079532; mus_musculus_aj. DR Ensembl-Tr; MGP_AKRJ_T0079455; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0079475; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0077821; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0079951; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0079685; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0079060; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0079212; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0079097; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0079245; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0079102; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0080199; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0079112; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0078206; mus_musculus_wsbeij. XX FH Key Location/Qualifiers FH FT source 1..1769 FT /organism="Mus musculus" FT /chromosome="6" FT /map="52.7 cM" FT /strain="129S1/SvImJ" FT /mol_type="mRNA" FT /sex="male" FT /tissue_type="liver" FT /db_xref="taxon:10090" FT gene 1..1769 FT /gene="Pparg" FT CDS 46..1563 FT /codon_start=1 FT /gene="Pparg" FT /product="peroxisome proliferator-activated receptor gamma FT transcript 2" FT /note="ligand-activated transcription factor; Nr1c3" FT /db_xref="GOA:Q6GU14" FT /db_xref="InterPro:IPR000536" FT /db_xref="InterPro:IPR001628" FT /db_xref="InterPro:IPR001723" FT /db_xref="InterPro:IPR003074" FT /db_xref="InterPro:IPR003077" FT /db_xref="InterPro:IPR013088" FT /db_xref="InterPro:IPR022590" FT /db_xref="InterPro:IPR035500" FT /db_xref="MGI:MGI:97747" FT /db_xref="UniProtKB/TrEMBL:Q6GU14" FT /protein_id="AAP42200.1" FT /translation="MGETLGDSPVDPEHGAFADALPMSTSQEITMVDTEMPFWPTNFGI FT SSVDLSVMEDHSHSFDIKPFTTVDFSSISAPHYEDIPFTRADPMVADYKYDLKLQEYQS FT AIKVEPASPPYYSEKTQLYNRPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFF FT RRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLL FT AEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMN FT SLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYAKNIPGFINLDLN FT DQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFA FT VKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQ FT LFAKVLQKMTDLRQIVTEHVQLLHVIKKTETDMSLHPLLQEIYKDLY" XX SQ Sequence 1769 BP; 520 A; 414 C; 386 G; 449 T; 0 other; caaaacacca gtgtgaatta cagcaaatct ctgttttatg ctgttatggg tgaaactctg 60 ggagattctc ctgttgaccc agagcatggt gccttcgctg atgcactgcc tatgagcact 120 tcacaagaaa ttaccatggt tgacacagag atgccattct ggcccaccaa cttcggaatc 180 agctctgtgg acctctccgt gatggaagac cactcgcatt cctttgacat caagcccttt 240 accacagttg atttctccag catttctgct ccacactatg aagacattcc attcacaaga 300 gctgacccaa tggttgctga ttacaaatat gacctgaagc tccaagaata ccaaagtgcg 360 atcaaagtag aacctgcatc tccaccttat tattctgaaa agacccagct ctacaacagg 420 cctcatgaag aaccttctaa ctccctcatg gccattgagt gccgagtctg tggggataaa 480 gcatcaggct tccactatgg agttcatgct tgtgaaggat gcaagggttt tttccgaaga 540 accatccgat tgaagcttat ttatgatagg tgtgatctta actgccggat ccacaaaaaa 600 agtagaaata aatgtcagta ctgtcggttt cagaagtgcc ttgctgtggg gatgtctcac 660 aatgccatca ggtttgggcg gatgccacag gccgagaagg agaagctgtt ggcggagatc 720 tccagtgata tcgaccagct gaacccagag tctgctgatc tgcgagccct ggcaaagcat 780 ttgtatgact catacataaa gtccttcccg ctgaccaaag ccaaggcgag ggcgatcttg 840 acaggaaaga caacggacaa atcaccattt gtcatctacg acatgaattc cttaatgatg 900 ggagaagata aaatcaagtt caaacatatc acccccctgc aggagcagag caaagaggtg 960 gccatccgaa tttttcaagg gtgccagttt cgatccgtag aagccgtgca agagatcaca 1020 gagtatgcca aaaatatccc tggtttcatt aaccttgatt tgaatgacca agtgactctg 1080 ctcaagtatg gtgtccatga gatcatctac acgatgctgg cctccctgat gaataaagat 1140 ggagtcctca tctcagaggg ccaaggattc atgaccaggg agttcctcaa aagcctgcgg 1200 aagccctttg gtgactttat ggagcctaag tttgagtttg ctgtgaagtt caatgcactg 1260 gaattagatg acagtgactt ggctatattt atagctgtca ttattctcag tggagaccgc 1320 ccaggcttgc tgaacgtgaa gcccatcgag gacatccaag acaacctgct gcaggccctg 1380 gaactgcagc tcaagctgaa tcacccagag tcctctcagc tgttcgccaa ggtgctccag 1440 aagatgacag acctcaggca gatcgtcaca gagcacgtgc agctactgca tgtgatcaag 1500 aagacagaga cagacatgag ccttcacccc ctgctccagg agatctacaa ggacttgtat 1560 tagcaggaaa gtcccacccg ctgacaacgt gttccttcta ttgattgcac tattattttg 1620 agggaaaaaa atctgacacc taagaaattt actgtgaaaa agcatttaaa aacaaaaagt 1680 tttagaacat gatctatttt atgcatattg tttataaaga tacatttaca atttactttt 1740 aatattaaaa attaccacat tataaaatt 1769 //