Dbfetch
ID AK148140; SV 1; linear; mRNA; HTC; MUS; 1577 BP. XX AC AK148140; XX DT 06-SEP-2005 (Rel. 85, Created) DT 07-OCT-2010 (Rel. 106, Last updated, Version 11) XX DE Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, DE clone:G370032C06 product:Adiponectin receptor protein 1, full insert DE sequence. XX KW CAP trapper; HTC; HTC_FLI. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-1577 RA Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., RA Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., RA Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H., Nomura K., RA Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., RA Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.; RT ; RL Submitted (30-MAR-2004) to the INSDC. RL Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical RL Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 RL Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL RL :http://www.osc.riken.jp/ XX RN [2] RX PUBMED; 16141072. RG The FANTOM Consortium, Riken Genome Exploration Research Group and Genome RG Science Group (Genome Network Project Core Group) RA ; RT "The Transcriptional Landscape of the Mammalian Genome"; RL Science, e1252229 309(5740):1559-1563(2005). XX RN [3] RX DOI; 10.1126/science.1112009. RX PUBMED; 16141073. RG RIKEN Genome Exploration Research Group and Genome Science Group (Genome RG Network Project Core Group) and the FANTOM Consortium RA ; RT "Antisense Transcription in the Mammalian Transcriptome"; RL Science, e1252229 309(5740):1564-1566(2005). XX RN [4] RX PUBMED; 12466851. RG The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase RG I and II Team RA ; RT "Analysis of the mouse transcriptome based on functional annotation of RT 60,770 full-length cDNAs"; RL Nature 420(6915):563-573(2002). XX RN [5] RX PUBMED; 11217851. RG The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM RG Consortium RA ; RT "Functional annotation of a full-length mouse cDNA collection"; RL Nature 409(6821):685-690(2001). XX RN [6] RX DOI; 10.1016/S0076-6879(99)03004-9. RX PUBMED; 10349636. RA Carninci P., Hayashizaki Y.; RT "High-efficiency full-length cDNA cloning"; RL Meth. Enzymol. 303:19-44(1999). XX RN [7] RX DOI; 10.1101/gr.145100. RX PUBMED; 11042159. RA Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., RA Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.; RT "Normalization and subtraction of cap-trapper-selected cDNAs to prepare RT full-length cDNA libraries for rapid discovery of new genes"; RL Genome Res. 10(10):1617-1630(2000). XX RN [8] RX DOI; 10.1101/gr.152600. RX PUBMED; 11076861. RA Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., RA Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., RA Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R., RA Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., RA Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., RA Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., RA Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.; RT "RIKEN integrated sequence analysis (RISA) system--384-format sequencing RT pipeline with 384 multicapillary sequencer"; RL Genome Res. 10(11):1757-1771(2000). XX DR MD5; c023c380d21ceea0d265fb4d2588ecdf. DR Ensembl-Gn; ENSMUSG00000026457; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0016507; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AJ_G0016490; mus_musculus_aj. DR Ensembl-Gn; MGP_AKRJ_G0016455; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0016450; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0016276; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0016911; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0015856; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0016249; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0016355; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0016354; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0016426; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0016379; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0016947; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0015642; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0015919; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000027727; mus_musculus. DR Ensembl-Tr; ENSMUST00000112237; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0022230; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AJ_T0022198; mus_musculus_aj. DR Ensembl-Tr; MGP_AKRJ_T0022166; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0022169; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0021976; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0022682; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0021505; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0021917; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0022046; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0022058; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0022150; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0022029; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0022715; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0021238; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0021553; mus_musculus_wsbeij. XX CC cDNA library was prepared and sequenced in Mouse Genome CC Encyclopedia Project of Genome Exploration Research Group in Riken CC Genomic Sciences Center and Genome Science Laboratory in RIKEN. CC Division of Experimental Animal Research in Riken contributed to CC prepare mouse tissues. CC Cells were provided by Drs. William J Pavan and Stacie Loftus and CC Denise Larson (Division of Intramural Research Genetic Disease CC Research Branch National Human Genome Reseach Institute National CC Institutes of Health (NIH) Building: 49, Room 4A82 49 Convent CC Drive MSC 4472 Bethesda,Maryland U.S.A) whose assistance we CC gratefully acknowledge. CC Please visit our web site for further details. CC URL:http://www.osc.riken.jp/ CC URL:http://fantom.gsc.riken.jp/ CC clone information is available at: CC http://fantom.gsc.riken.jp/3/db/annotate/ CC main.cgi?masterid=G370032C06 XX FH Key Location/Qualifiers FH FT source 1..1577 FT /organism="Mus musculus" FT /strain="C57BL/6J" FT /mol_type="mRNA" FT /clone_lib="RIKEN full-length enriched mouse cDNA library" FT /clone="G370032C06" FT /cell_type="B16 F10Y cells" FT /db_xref="taxon:10090" FT CDS 199..1326 FT /codon_start=1 FT /transl_table=1 FT /note="Adiponectin receptor protein 1 (UniProt|Q91VH1, FT evidence: FASTY, 100%ID, 100%length, match=1125)" FT /note="putative" FT /db_xref="GOA:Q53YY4" FT /db_xref="InterPro:IPR004254" FT /db_xref="MGI:MGI:1919924" FT /db_xref="UniProtKB/TrEMBL:Q53YY4" FT /protein_id="BAE28369.1" FT /translation="MSSHKGSAGAQGNGAPSGNREADTVELAELGPLLEEKGKRAASSP FT AKAEEDQACPVPQEEEEEVRVLTLPLQAHHAMEKMEEFVYKVWEGRWRVIPYDVLPDWL FT KDNDYLLHGHRPPMPSFRACFKSIFRIHTETGNIWTHLLGFVLFLFLGILTMLRPNMYF FT MAPLQEKVVFGMFFLGAVLCLSFSWLFHTVYCHSEKVSRTFSKLDYSGIALLIMGSFVP FT WLYYSFYCSPQPRLIYLSIVCVLGISAIIVAQWDRFATPKHRQTRAGVFLGLGLSGVVP FT TMHFTIAEGFVKATTVGQMGWFFLMAVMYITGAGLYAARIPERFFPGKFDIWFQSHQIF FT HVLVVAAAFVHFYGVSNLQEFRYGLEGGCTDDSLL" XX SQ Sequence 1577 BP; 308 A; 450 C; 442 G; 377 T; 0 other; ggagggcgct gaggatcggg cgcccctcgg ccgcaggccg cctccagtgc cgcgggatgt 60 agcgcccggg cccgcggccc ccagcagagg cagccagcca ggcctgtcca ccatcacagg 120 aagatctctg ccctctgggg ctgagagacc ccaacctttc ttcaagctga agctgccagg 180 cactgaggta ccagccagat gtcttcccac aaaggctctg ccggggcaca aggcaatggg 240 gctccttctg gtaacagaga agctgacaca gtggagctgg ctgagctggg gcccctgctg 300 gaggagaagg gcaagcgggc agccagcagc ccagccaagg ctgaggaaga tcaagcatgc 360 ccggtgcctc aggaagagga ggaggaggtg cgggtgctga cgcttcctct gcaagcccac 420 catgccatgg agaagatgga ggagttcgtg tataaggtct gggagggacg ttggagagtc 480 atcccgtatg atgtgcttcc tgactggctg aaagacaacg actacctgct acatggccac 540 agaccaccta tgccctcctt tcgggcttgc ttcaagagca tcttccgcat ccacacagag 600 actggcaaca tctggacaca tctgcttggt tttgtgctat ttctctttct gggaatcttg 660 acgatgctga gaccaaatat gtacttcatg gctcccctgc aggagaaggt ggtcttcggg 720 atgttcttcc tgggcgcggt gctctgcctc agtttctcct ggctcttcca cactgtctac 780 tgtcattcag agaaggtctc tcggactttt tccaaactgg actattcagg gattgctcta 840 ctgattatgg ggagcttcgt tccctggctc tattactcct tctactgctc cccacagccg 900 cggctcatct acctctccat cgtctgtgtc ctgggcatct ctgccatcat tgtggcacag 960 tgggaccggt ttgccactcc caagcaccgg cagacaagag caggagtgtt cctgggactt 1020 ggcttgagtg gtgttgtacc caccatgcac tttactatcg ctgagggctt tgtcaaggcc 1080 accacggtgg gccagatggg ctggttcttc ctcatggctg tgatgtacat caccggcgcc 1140 ggcctgtatg ctgctcggat tcctgagcgc ttcttccctg gaaaatttga catctggttc 1200 cagtctcatc agattttcca cgtcctggtg gtggcagcag ctttcgtcca cttctatggt 1260 gtgtccaacc ttcaggaatt ccgttatggc ctagaaggtg gctgtaccga cgactccctt 1320 ctctgagcct ccccacctga ggggtggagg aggggcttcc caagtgcttt taaaaataac 1380 ttctttgctg aagtatgagg aagagtctga gttgtctgtt tctagaagaa atctcttaga 1440 gaagtcagta ccagtgacat gtcagctcac tgtcccagcc tccgtccggg cagtacactt 1500 cccatgtgca ttcccggcag tcacctcggc aaggcaactg ctgctccttc acagatagga 1560 cgtgggagct catgttg 1577 //