Dbfetch
ID AK040136; SV 1; linear; mRNA; HTC; MUS; 1762 BP. XX AC AK040136; XX DT 18-DEC-2002 (Rel. 74, Created) DT 07-OCT-2010 (Rel. 106, Last updated, Version 15) XX DE Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, DE clone:A430069C18 product:glutathione reductase 1, full insert sequence. XX KW CAP trapper; HTC; HTC_FLI. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-1762 RA Adachi J., Aizawa K., Akimura T., Arakawa T., Bono H., Carninci P., RA Fukuda S., Furuno M., Hanagaki T., Hara A., Hashizume W., Hayashida K., RA Hayatsu N., Hiramoto K., Hiraoka T., Hirozane T., Hori F., Imotani K., RA Ishii Y., Itoh M., Kagawa I., Kasukawa T., Katoh H., Kawai J., Kojima Y., RA Kondo S., Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., RA Miyazaki A., Murata M., Nakamura M., Nishi K., Nomura K., Numazaki R., RA Ohno M., Ohsato N., Okazaki Y., Saito R., Saitoh H., Sakai C., Sakai K., RA Sakazume N., Sano H., Sasaki D., Shibata K., Shinagawa A., Shiraki T., RA Sogabe Y., Tagami M., Tagawa A., Takahashi F., Takaku-Akahira S., RA Takeda Y., Tanaka T., Tomaru A., Toya T., Yasunishi A., Muramatsu M., RA Hayashizaki Y.; RT ; RL Submitted (16-JUL-2001) to the INSDC. RL Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical RL Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 RL Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL RL :http://www.osc.riken.jp/ XX RN [2] RX PUBMED; 16141072. RG The FANTOM Consortium, Riken Genome Exploration Research Group and Genome RG Science Group (Genome Network Project Core Group) RA ; RT "The Transcriptional Landscape of the Mammalian Genome"; RL Science, e1252229 309(5740):1559-1563(2005). XX RN [3] RX DOI; 10.1126/science.1112009. RX PUBMED; 16141073. RG RIKEN Genome Exploration Research Group and Genome Science Group (Genome RG Network Project Core Group) and the FANTOM Consortium RA ; RT "Antisense Transcription in the Mammalian Transcriptome"; RL Science, e1252229 309(5740):1564-1566(2005). XX RN [4] RX PUBMED; 12466851. RG The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase RG I and II Team RA ; RT "Analysis of the mouse transcriptome based on functional annotation of RT 60,770 full-length cDNAs"; RL Nature 420(6915):563-573(2002). XX RN [5] RX PUBMED; 11217851. RG The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM RG Consortium RA ; RT "Functional annotation of a full-length mouse cDNA collection"; RL Nature 409(6821):685-690(2001). XX RN [6] RX DOI; 10.1016/S0076-6879(99)03004-9. RX PUBMED; 10349636. RA Carninci P., Hayashizaki Y.; RT "High-efficiency full-length cDNA cloning"; RL Meth. Enzymol. 303:19-44(1999). XX RN [7] RX DOI; 10.1101/gr.145100. RX PUBMED; 11042159. RA Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., RA Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.; RT "Normalization and subtraction of cap-trapper-selected cDNAs to prepare RT full-length cDNA libraries for rapid discovery of new genes"; RL Genome Res. 10(10):1617-1630(2000). XX RN [8] RX DOI; 10.1101/gr.152600. RX PUBMED; 11076861. RA Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., RA Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., RA Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R., RA Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., RA Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., RA Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., RA Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.; RT "RIKEN integrated sequence analysis (RISA) system--384-format sequencing RT pipeline with 384 multicapillary sequencer"; RL Genome Res. 10(11):1757-1771(2000). XX DR MD5; fdbb8263e91f27b533359ada566c2946. DR Ensembl-Gn; ENSMUSG00000031584; mus_musculus. DR Ensembl-Tr; ENSMUST00000033992; mus_musculus. XX CC cDNA library was prepared and sequenced in Mouse Genome CC Encyclopedia Project of Genome Exploration Research Group in Riken CC Genomic Sciences Center and Genome Science Laboratory in RIKEN. CC Division of Experimental Animal Research in Riken contributed to CC prepare mouse tissues. CC Please visit our web site for further details. CC URL:http://www.osc.riken.jp/ CC URL:http://fantom.gsc.riken.jp/ CC clone information is available at: CC http://fantom.gsc.riken.jp/3/db/annotate/ CC main.cgi?masterid=A430069C18 XX FH Key Location/Qualifiers FH FT source 1..1762 FT /organism="Mus musculus" FT /strain="C57BL/6J" FT /mol_type="mRNA" FT /dev_stage="0 day neonate" FT /clone_lib="RIKEN full-length enriched mouse cDNA library" FT /clone="A430069C18" FT /tissue_type="thymus" FT /db_xref="taxon:10090" FT CDS 12..1514 FT /codon_start=1 FT /transl_table=1 FT /note="glutathione reductase 1 (MGD|MGI:95804 GB|NM_010344, FT evidence: BLASTN, 98%, match=1640)" FT /note="putative" FT /db_xref="GOA:P47791" FT /db_xref="InterPro:IPR001100" FT /db_xref="InterPro:IPR004099" FT /db_xref="InterPro:IPR006322" FT /db_xref="InterPro:IPR012999" FT /db_xref="InterPro:IPR016156" FT /db_xref="InterPro:IPR023753" FT /db_xref="InterPro:IPR036188" FT /db_xref="MGI:MGI:95804" FT /db_xref="UniProtKB/Swiss-Prot:P47791" FT /protein_id="BAC30518.1" FT /translation="MALLPRALGVGAAPSLRRAARALTCAMASPGEPQPPAPDTSSFDY FT LVIGGGSGGLASARRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDH FT VDYGFQSCEGKFSWHVIKQKRDAYVSRLNTIYQNNLTKSHIEIIHGYATFADGPRPTVE FT VNGKKFTAPHILIATGGVPTVPHESQIPGASLGITSDGFFQLEDLPSRSVIVGAGYIAV FT EIAGILSALGSKTSLMIRHDKVLRNFDSLISSNCTEELENAGVEVLKFTQVKEVKKTSS FT GLELQVVTSVPGRKPTTTMIPDVDCLLWAIGRDPNSKGLNLNKVGIQTDEKGHILVDEF FT QNTNVKGVYAVGDVCGKALLTPVAIAAGRKLAHRLFECKQDSKLDYDNIPTVVFSHPPI FT GTVGLTEDEAVHKYGKDNVKIYSTAFTPMYHAVTTRKTKCVMKMVCANKEEKVVGIHMQ FT GIGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR" XX SQ Sequence 1762 BP; 421 A; 446 C; 498 G; 397 T; 0 other; gacttccgcg catggcgctg ctgccccggg cgctgggcgt gggcgcggcc ccgagcctgc 60 ggcgggcagc gcgcgcgctc acctgcgcca tggcgagtcc cggcgagccg cagcccccgg 120 ccccggacac ctcttccttc gactacctgg tgatcggcgg cggctccggc gggctggcca 180 gcgcgcggcg ggcggcggag ctcggcgcca gggccgcggt ggtggagagt cacaagctgg 240 gtggcacttg cgtgaatgtt ggatgtgtac ccaaaaaggt aatgtggaac acagcagtgc 300 actcggaatt catgcacgat cacgtggatt acggctttca aagctgtgag ggtaaattca 360 gttggcatgt catcaagcag aaaagggatg cctatgtgag ccgcctgaac accatctatc 420 aaaataattt aaccaagtct cacatagaaa ttatccacgg ctatgcaaca ttcgcagatg 480 gtcctcggcc cacggtggaa gtcaatggga aaaagtttac cgctccacac atcctgattg 540 ccacaggagg cgtgcccaca gttcctcacg agagccagat cccaggcgcc agcctgggga 600 tcaccagtga tggcttcttt cagctggagg acttgcccag ccgcagcgtc atcgtggggg 660 ccgggtacat tgctgtggag atcgcgggca tcctctctgc cctgggctcc aagacatctc 720 ttatgatcag gcatgataag gtactgagaa attttgattc actcatcagt tccaactgca 780 ccgaggaact ggagaatgcc ggcgtggagg tgttgaagtt cacacaggtt aaggaagtaa 840 aaaagacatc atcaggcctg gagctccaag tggtgacttc cgtgcctggt aggaagccca 900 ccacgaccat gattccagat gttgactgcc tgctctgggc cattggacgg gacccaaatt 960 ctaagggcct gaatctgaat aaagtgggca ttcagacgga tgaaaagggc cacatcctag 1020 tagacgaatt ccagaatacc aatgtcaaag gcgtctatgc tgtgggagac gtctgtggga 1080 aagcgcttct caccccagtt gcaatcgctg ctggccggaa acttgcccat agactgtttg 1140 aatgcaaaca agattccaaa ttagactatg acaacatccc tactgtggtc ttcagccacc 1200 cccctattgg gaccgtgggg ctcactgaag acgaagctgt tcataagtat gggaaagaca 1260 atgtgaaaat ctactcgact gcctttaccc cgatgtatca cgctgtgacc acgaggaaga 1320 cgaaatgcgt catgaagatg gtttgtgcca acaaagagga aaaggtggtt ggcattcaca 1380 tgcaggggat tggctgtgat gagatgctgc agggcttcgc tgtagcggtg aaaatggggg 1440 ccaccaaggc cgacttcgac aacacagttg ccattcatcc tacctcttca gaggagctgg 1500 tcaccctgcg ctgagagcct ggggacccag gtggctagcg gtgcgaccag caggcctccg 1560 ggaggaaccg atcgagttta cgcccagctt ctacagatct ctgtatttta atcaggaatt 1620 tctggtggtg taaatttcca gctatacaca cgcacagaag aacttatgta tctaatcaga 1680 aggttgtttt gttaatccgg ggttggtttt catttgataa tatttataat taatattttg 1740 atttttttgt tgttgtttaa tt 1762 //