Dbfetch
ID AF216834; SV 2; linear; genomic DNA; STD; MUS; 4857 BP. XX AC AF216834; XX DT 11-JUL-2000 (Rel. 64, Created) DT 04-DEC-2002 (Rel. 74, Last updated, Version 2) XX DE Mus musculus ferroportin 1 (Slc39a1) gene, promoter region and partial cds. XX KW . XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-4857 RX DOI; 10.1074/jbc.M000713200. RX PUBMED; 10747949. RA Abboud S., Haile D.J.; RT "A novel mammalian iron-regulated protein involved in intracellular iron RT metabolism"; RL J Biol Chem 275(26):19906-19912(2000). XX RN [2] RP 1-4857 RX PUBMED; 10828623. RA Haile D.J.; RT "Assignment of Slc11a3 to mouse chromosome 1 band 1B and SLC11A3 to human RT chromosome 2q32 by in situ hybridization"; RL Cytogenet. Cell Genet. 88(3-4):328-329(2000). XX RN [3] RP 1-4857 RA Haile D.J.; RT ; RL Submitted (15-DEC-1999) to the INSDC. RL Medicine, UTHSCSA, 7703 Floyd Curl Drive, San Antonio, TX 78229, USA XX RN [4] RC Sequence update by submitter RP 1-4857 RA Haile D.J.; RT ; RL Submitted (09-NOV-2001) to the INSDC. RL Medicine, University of Texas Health Science Center at San Antonio, 7703 RL Floyd Curl Drive, San Antonio, TX 78240, USA XX DR MD5; ca90db544f07fe28d23d783df7698b8c. DR Ensembl-Gn; ENSMUSG00000025993; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0015996; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AJ_G0015980; mus_musculus_aj. DR Ensembl-Gn; MGP_AKRJ_G0015935; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0015934; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0015767; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0016387; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0015349; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0015739; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0015840; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0015842; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0015910; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0015862; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0016434; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0015133; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0015410; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000027137; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0019694; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AJ_T0019671; mus_musculus_aj. DR Ensembl-Tr; MGP_AKRJ_T0019628; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0019620; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0019449; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0020119; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0018956; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0019403; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0019517; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0019523; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0019605; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0019493; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0020173; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0018713; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0019044; mus_musculus_wsbeij. DR RFAM; RF02253; IRE_II. XX CC On Dec 2, 2002 this sequence version replaced gi:8927327. XX FH Key Location/Qualifiers FH FT source 1..4857 FT /organism="Mus musculus" FT /chromosome="1" FT /map="band 1B" FT /strain="129/SvJ" FT /mol_type="genomic DNA" FT /db_xref="taxon:10090" FT misc_feature 1..3772 FT /gene="Slc39a1" FT /note="promoter region" FT mRNA join(3773..4134,4571..>4638) FT /gene="Slc39a1" FT /product="SLC11A3" FT misc_feature 3794 FT /gene="Slc39a1" FT /note="possible alternative transcription start site" FT CDS join(4092..4134,4571..>4638) FT /codon_start=1 FT /gene="Slc39a1" FT /product="ferroportin 1" FT /note="SLC11A3; IREg1; MTP1" FT /db_xref="GOA:Q9JHI9" FT /db_xref="InterPro:IPR009716" FT /db_xref="InterPro:IPR036259" FT /db_xref="MGI:MGI:1315204" FT /db_xref="UniProtKB/Swiss-Prot:Q9JHI9" FT /protein_id="AAF82036.1" FT /translation="MTKARDQTHQEGCCGSLANYLTSAKFLLYLGHSLSTW" XX SQ Sequence 4857 BP; 1349 A; 950 C; 1143 G; 1407 T; 8 other; tagtaggaat tagcttcaag gggtttctta gaagcaggta tgctgtatgg catgtcggag 60 gcagatgact tgaataggtg tgtacactga gaactctttg gagatatgtg agatctgaga 120 tttatactct cttctgtgag ggcagcaagc aattgagaaa tcaaatgaac agggacctag 180 tgtctgtctg tttggctaag ccctaggatg gcaaggctga gagaggtctt tagggttgta 240 gttagtaagc atccagcttt ggtgtttagc tggaaacaag caataaagga atggacttta 300 tttcataaca gaaataaagt tagacagaaa ggatctatgg caaaagttaa gagaccaaaa 360 tacttattaa gtgaaattca tatatatttt ctggctatat atggagaaaa ttaacaatga 420 acacagctct ctattttagt ttccaatata acgtgcaaga tttgatttct gttttcttct 480 ttctacatat ctttcctata ttaatccctg atttgggaaa atggcagagt ttccttttaa 540 gacactgttt tttgtttgtg tgttttttaa taactgaggt aaaaaaatca catgagataa 600 attcattgtt tatgtcattt taatacagct ttgacacttt ggataattca caatgttgca 660 tcatcaccag tgacaagaca tccatcattt tatgcccagt gcccaggatc ttgtcattac 720 ctactcttct ttcagacctt gaggacaact atgatattat tattattatt attattatta 780 ttattgtata cattattgta acatacacaa tgtatatatt accacgtata taatgtaata 840 aatatatatt taatattcat acacaaatac tatatattat gtataacaca tacttataaa 900 tgtctatata ttatatgtta taaatgttgt ataacaaaat atttatatat aatatataat 960 gtaaataatg tatattacat attaaatata tacttttgaa atattatgca ttcatttttt 1020 aaagctagag atgtatgagg agaatggagg agaggtcacg tatttataca aagcttgcca 1080 aggttgagtt tcttgggata ctcaaccaaa ataaagcgtt atgatgatga tcatctttct 1140 gttcgttgtc tatgacttga agtaagaccc tgaatttgaa tttctcaaga gtctactcag 1200 tttgaagctt atagaagtct cagacagtct tgaaaggcac ttggacagaa ttgtggcttt 1260 gtactgttaa agctttgcat ctgatgggag ctctgtcctc agagctaagg cttcctgtaa 1320 cagtggatga taaccccact gtgttttttc cttttcattt gtcttcacgg ctgtggagta 1380 gtggccattc cctgtgctgt ttttgatctg gagagctggt cagatgcaga agaggcaact 1440 gagggccctg gaggtaagta aaaacacaac ttgaaaggaa agaataagtc cttttattcc 1500 ccaaccataa atatgtgtta acaacttcca atcagagtac attttattct ggctggaaga 1560 tttaaaaggc tcttttaaaa ctaacagact tttaaacagc tcaatagtga cacacgcctg 1620 ttattccagt gctggggaag ctgaggcaga aggattctga gttcagagcc ggtatgagta 1680 acttacattc tgtctcataa ataccatatt gaaatgaatt gagaaatagt tttggggggc 1740 acttattttt tgtttttgaa aactggttta aaacatgcat gactttgttt agttatgatt 1800 acgttgataa gaaagttata tattttctgt tctgagaggg aaaacattgc ttttggatga 1860 aactttactt ttcaatcagt gaaatgtttc tgtggtagga ggaagagcca gtggtgtctt 1920 gtgactgagc tatgctttct aatctggaat gtcaaggcca ggaaactctg tcacttgtgt 1980 actccaagcg ttctgagaat ttttattcca ttttctattt taactccttc tatgtcatga 2040 gctccaacaa tacactaact attcattccc aacgactagg ataggagccc tggccaagtc 2100 ctcagatatt gaatgctttt tctgtctatg aatcttgctt atttgctgct tgcttcactg 2160 taggacccca cctgttctta gcactctcct agtttgggct tctgaggact ccttggtgac 2220 aatggggaac acatcacact tcgaagcacg catcaactga gctcctgttt ctcagagtct 2280 tctgactaga tgtgggggat agctcttaag gcacactgta cttaatgcaa agggcatgga 2340 gatcctgtta ttggcacata tgtgcaggga atcaggatag tttgtattct gaagatcaac 2400 aaaattaaaa gaaaggaagg aagggctggg ggaaacagag agacagacag agagagagag 2460 agacagagag agagagagag agagagagag agagagagag agaaaccgtc agaacttgct 2520 agatgatccc ttcctaagtg cttcatgtaa gcacacttaa agtttactcc aaacgacatt 2580 tggatatact accccatttt gcatcttcag cagacatacc cgaacctgtg atagaggaga 2640 aaggacttaa acgttttgtg tgtcaggaga gagaaaggtt tgcaaaggac aaaaagcggt 2700 tgcagtagca aagccctatc tcggttctgc agacctcatc ctaacgaatc cagctgcacc 2760 ccgcccgcaa agacctttgg ggcttctgat agagagtcca gatacaaggc ctgtgctcat 2820 gagtggctct cttcattacc aggtgtcatt ctggcagggc tggaagagtg caagccggtt 2880 ggagtttcaa tgtgtaggat cactcttgaa gtgttgacaa aactgacaaa ggtaagctaa 2940 gggaagggct gacacaagaa gcaggtatgc cctggggagg aaacggaggt cattagaggc 3000 ttacacctgg tgtgtattca cctgtccccc caggaggcta ccaaaagggc tttatctgca 3060 cggggccaga cccagggtcc caactgggac aaccggtatt cctggttact tcccttcagc 3120 acttggagcc tgtggagtag ccaaagaggc aggagcggct agggttagaa ctcagaggga 3180 aaggacagtg aagggcgctg cctccttgca gtgcctgtgg cacagaaggc ggcctgcgtt 3240 cgatcactgg gctgcgcggg gctacattgt gatctttgag cctgcttcct gagctttgat 3300 tccgcagctt ttgagagaga gccctctcta tagttcggag aaggaaaaca ttctgcgccg 3360 caggcaggcc ggacatgact tgtatttact tagctacctg cattccgaag ggtagctagg 3420 gtgggaggct cctttttttc cgcgccagct cccgctgagc tttgcctagg gactgtccgg 3480 caatctggtg gccagagaga agagcttcct tctagcacct gccaatcgac tttgtgcaaa 3540 atgtttctgt agtgtcccct cggggtccgc atacagtccc cgtcctactg tgcgggccac 3600 cccttggctt ctcctgcggt agcccagcca aagcgcaggt tgtttgcgtc tcctgggagg 3660 gcggtgggag cgtagctggc gcggacctgg acgtccagcc gcgaagggcg gtccctgctc 3720 tctcaagctc cgcccccggc tccctataag ccgctgccct gcccgcggcg gtggcggcgg 3780 cggcggcggc ggcgagagca ggctcggggt ctcctgcggc cggtggatcc tccaacccgc 3840 tcccataagg ctttggcttt ccaacttcag ntacagtgtt agctaagttt ggaaagaaga 3900 caaaaagaag accccgtgac agctttgctg ttgttgtttg ccttagttgt cctttggggt 3960 ctttcggcat aaggctgttg tgcttatagt ggtgntatnt tcggttcctc tcactcctgt 4020 gaacaagctc ccgggcaaga gcagctaaag ctaccagcat cagaacaaac acggggagaa 4080 cgcctggtgt catgaccaag gcaagagatc aaacccatca ggaaggatgc tgtggtgagt 4140 tgagtaatcg aatgtttcaa atggtgggaa tgcaggtggg gacggggaga tgtagttcca 4200 tgagggttga cttgggtttt gatggagggt gaagaagaat atawactcat agtttgaata 4260 aaagaactta catataggca gggatagagt aacctgggca gggtgaaatt tcttgcatta 4320 aaaaaacaaa ccccaccaaa gttaagtaat gttgaaacaa gagtttcttc actgcctgaa 4380 gttggggcgg ttattgacca agagacaacg ctgaatctta agtggatgct attaagtaaa 4440 ctgaatgcat cagtcttgta agtgacctgt tttaaaaaat cacacttaat tacgaccaaa 4500 agcaaattct aatctgagca cattggggtg cttaaacacg ttttttaact tgttctctgt 4560 gcctttctag gatccttagc aaactacctg acctcagcaa aattcctcct ctaccttggc 4620 cactctctct ccacttgggt aagtgagnat gcacacagtt cttgagacat cgtngcacaa 4680 gctgttgttt actctcatcg gagacagttg tattggagaa ctngcagttt tctcattccg 4740 ttaagtaaat aaatcgttct aanacacatg tttcaacaaa aacgttgttt tcttcaaaga 4800 tgtttcccat gagtgttagt aaattttact taatagtgaa attctaaagc taagggc 4857 //