Dbfetch
ID AF211855; SV 1; linear; mRNA; STD; MUS; 5964 BP. XX AC AF211855; XX DT 31-JUL-2001 (Rel. 68, Created) DT 23-SEP-2008 (Rel. 97, Last updated, Version 6) XX DE Mus musculus K-Cl cotransporter 3b mRNA, complete cds, alternatively DE spliced. XX KW . XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-5964 RX DOI; 10.1016/S0306-4522(00)00567-4. RX PUBMED; 11246162. RA Pearson M.M., Lu J., Mount D.B., Delpire E.; RT "Localization of the K(+)-Cl(-) cotransporter, KCC3, in the central and RT peripheral nervous systems: expression in the choroid plexus, large neurons RT and white matter tracts"; RL Neuroscience 103(2):481-491(2001). XX RN [2] RP 1-5964 RX DOI; 10.1152/ajprenal.00464.2004. RX PUBMED; 16048901. RA Mercado A., Vazquez N., Song L., Cortes R., Enck A.H., Welch R., RA Delpire E., Gamba G., Mount D.B.; RT "NH2-terminal heterogeneity in the KCC3 K+-Cl- cotransporter"; RL Am. J. Physiol. Renal Physiol. 289(6):F1246-F1261(2005). XX RN [3] RP 1-5964 RA Mount D.B., Song L.S., Delpire E.; RT ; RL Submitted (03-DEC-1999) to the INSDC. RL Nephrology, Vanderbilt University Medical Center, S-3223 Medical Center RL North, VUMC, Nashville, TN 37232, USA XX DR MD5; bf0fdf3c64d1b55c45ef56f701e69e96. DR Ensembl-Gn; ENSMUSG00000027130; mus_musculus. DR Ensembl-Gn; MGP_AJ_G0026248; mus_musculus_aj. DR Ensembl-Gn; MGP_BALBcJ_G0026261; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C57BL6NJ_G0026708; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CBAJ_G0025983; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0026122; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0026084; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0026223; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0026103; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0026763; mus_musculus_nzohlltj. DR Ensembl-Tr; ENSMUST00000028549; mus_musculus. DR Ensembl-Tr; ENSMUST00000053666; mus_musculus. DR Ensembl-Tr; MGP_AJ_T0056703; mus_musculus_aj. DR Ensembl-Tr; MGP_BALBcJ_T0056644; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C57BL6NJ_T0057128; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CBAJ_T0056304; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0056413; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0056379; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0056539; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0056355; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0057286; mus_musculus_nzohlltj. XX FH Key Location/Qualifiers FH FT source 1..5964 FT /organism="Mus musculus" FT /strain="C57BL/6J" FT /mol_type="mRNA" FT /db_xref="taxon:10090" FT CDS 1..3300 FT /codon_start=1 FT /product="K-Cl cotransporter 3b" FT /note="KCC3b; includes alternative exon 1b; alternatively FT spliced" FT /db_xref="GOA:Q924N4" FT /db_xref="InterPro:IPR000076" FT /db_xref="InterPro:IPR004841" FT /db_xref="InterPro:IPR004842" FT /db_xref="InterPro:IPR018491" FT /db_xref="InterPro:IPR030364" FT /db_xref="MGI:MGI:2135960" FT /db_xref="UniProtKB/Swiss-Prot:Q924N4" FT /protein_id="AAK81896.1" FT /translation="MPHFTVTKVEDPEEGAAGPLSPEPSSAEVKARIQDPQEPDPSQNS FT ITGEHSQLLDDGHKKARNAYLNNSNYEEGDEYFDKNLALFEEEMDTRPKVSSLLNRMAN FT YTNLTQGAKEHEEAENITEGKKKPTKSPQMGTFMGVYLPCLQNIFGVILFLRLTWVVGT FT AGILQAFAIVLICCCCTMLTAISMSAIATNGVVPAGGSYFMISRALGPEFGGAVGLCFY FT LGTTFAAAMYILGAIEIFLVYIVPRAAIFRSDDALKESAAMLNNMRVYGTAFLVLMVLV FT VFIGVRYVNKFASLFLACVIVSILAIYAGAIKSSFAPPHFPVCMLGNRTLSSRHLDICS FT KTKEVDNMTVPSKLWGFFCNSSQFFNATCDEYFVHNNVISIQGIPGLASGIITENLWSN FT YLPKGEIIEKPSAKSSDVLGNLNHEYVLADITTSFTLLVGIFFPSVTGIMAGSNRSGDL FT KDAQKSIPIGTILAILTTSFVYLSNVVLFGACIEGVVLRDKFGDAVKGNLVVGTLSWPS FT PWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHSKANGEPTWALLLTA FT AIAELGILIASLDLVAPILSMFFLMCYLFVNLACALQTLLRTPNWRPRFRYYHWALSFM FT GMSICLALMFISSWYYAIVAMVIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARFALLRL FT EEGPPHTKNWRPQLLVLLKLDEDLHVKHPRLLTFASQLKAGKGLTIVGSVIVGNFLENY FT GDALAAEQTIKHLMEAEKVKGFCQLVVAAKLKEGISHLIQSCGLGGMKHNTVVMGWPNG FT WRQSEDARAWKTFIGTVRVTTAAHLALLVAKNVSFFPSNVEQFSEGNIDVRWIVHDGGM FT LMLLPFLLKQHKVWRKCSIRIFTVAQLEDNSIQMKKDLATFLYHLRIEAEVEVVEMHDS FT DISAYTYERTLMMEQRSQMLRHMRLSKTERDREAQLVKDRNSMLRLTSIGSDEDEETET FT YQEKVHMTWTKDKYMASRGQKVKSMEGFQDLLNMRPDQSNVRRMHTAVKLNEVIVNKSH FT EAKLVLLNMPGPPRNPEGDENYMEFLEVLTEGLERVLLVRGGGSEVITIYS" XX SQ Sequence 5964 BP; 1608 A; 1385 C; 1347 G; 1624 T; 0 other; atgccacatt ttactgtgac caaggtagaa gacccagagg agggggcagc tggccccctc 60 tctcctgagc ccagctcagc agaagtaaaa gcccggattc aggatcccca agaaccagac 120 ccgagtcaga actccatcac aggggagcac agccagctgt tagatgacgg ccataaaaaa 180 gcccgaaatg cttatctcaa taattccaac tatgaagaag gagacgaata ttttgataaa 240 aatttggcac tctttgagga agaaatggac accagaccaa aggtgtcttc tctcctcaac 300 cgcatggcca actatacaaa tctgacacaa ggagcaaagg aacatgaaga ggcagagaac 360 atcactgaag ggaaaaagaa gcctaccaag agcccccaaa tgggtacttt catgggtgtc 420 tacctcccat gtctacagaa catctttgga gtgatcctct tcctgcgtct tacctgggta 480 gtgggaacag ctggaatcct tcaggccttt gcaattgtcc tcatctgctg ctgctgtaca 540 atgttaactg ccatctccat gagcgccatc gccactaacg gagtggtgcc agctgggggc 600 tcatacttca tgatttccag agccctgggc ccagagtttg gcggggctgt aggcctctgc 660 ttttatcttg gcaccacatt tgcagcagcc atgtatattc ttggtgccat tgaaatcttt 720 ctggtataca ttgtcccccg agctgccatc tttcggagtg acgatgcact caaggagtca 780 gcagctatgc tgaacaacat gcgcgtctat ggtacagcct tcttggtcct catggtcttg 840 gtggtattca tcggcgtacg ctatgtgaat aagtttgcct cactcttcct ggcctgtgta 900 attgtgtcga tcttggctat ctatgctggt gccatcaagt cttcctttgc tccaccacac 960 ttcccggtct gtatgctggg caaccgtacc ctgtcatcaa gacaccttga catttgctct 1020 aagaccaagg aggttgacaa catgacagta ccatcaaagt tatggggatt cttctgcaac 1080 tcgagtcagt tctttaatgc cacctgtgat gagtactttg ttcacaataa cgtcatctca 1140 atccaaggca ttccagggtt ggctagtggt atcattactg aaaatctttg gagtaattat 1200 ttaccaaagg gtgagataat tgaaaagcca tcagccaagt catctgatgt cttaggcaac 1260 ttaaaccatg aatatgttct tgctgatatc accacctcct tcactctgct ggtggggatc 1320 ttctttccct cggtcacagg tatcatggct gggtcaaaca gatctggaga tctgaaagat 1380 gcccagaagt ctattcccat tgggaccatc cttgccatcc tgaccacatc ctttgtgtat 1440 ttaagcaatg ttgtcctttt tggtgcatgt attgaaggag tcgttctcag agacaaattt 1500 ggggatgctg taaaagggaa tttggttgta ggcaccttat cctggccatc cccgtgggtg 1560 atcgttattg gctccttctt ttcaacatgt ggggctgggc tgcagagcct cacaggtgcg 1620 cctcggctgc tgcaggctat cgccaaggat aacatcatac ctttccttag ggtttttggt 1680 cacagcaaag ctaatgggga acctacctgg gctttacttc taactgctgc catagcagag 1740 ctgggaattc tcatcgcctc cctggatctc gtggccccaa ttctttccat gttttttctc 1800 atgtgttacc tctttgtgaa cttggcttgt gccttgcaaa cattgctgcg aacccccaac 1860 tggaggcctc gattccgcta ttatcactgg gccctctctt tcatgggaat gagtatctgt 1920 ctagctctga tgttcatttc ttcttggtat tatgccattg tagctatggt aatagctggc 1980 atgatctaca agtacattga atatcaaggg gctgagaaag aatgggggga tggtatccgt 2040 gggctgtcgc tcagtgcagc ccgcttcgct ttgctccgtc tagaggaagg acctcctcac 2100 actaaaaact ggaggcctca gctgctcgtc ctactgaagc tggatgaaga tttacacgtc 2160 aagcaccctc gcctcctcac ctttgcctcc cagctcaagg caggaaaggg actcacgatt 2220 gtgggctctg tcatcgtggg gaacttcttg gagaactatg gtgacgcgct cgcggcagag 2280 cagaccatta agcacctaat ggaggcagaa aaggtaaaag gattctgcca attggtggtg 2340 gctgccaagc tgaaagaggg catttcacac ctcatccagt cctgtggcct cggaggcatg 2400 aaacacaaca cagtggtgat gggctggccc aatggctggc gtcagagtga agatgctcgc 2460 gcttggaaga ctttcattgg cacagtacga gtgacaactg ctgcccatct agccctgctg 2520 gtggctaaaa atgtctcctt ctttcccagc aatgtggagc agttttctga gggcaacatt 2580 gatgtgcggt ggattgtgca tgatgggggc atgctcatgc tattaccgtt cctgctgaaa 2640 cagcacaagg tttggcggaa atgcagcata cggatcttca cagtagccca actagaagac 2700 aacagtatcc agatgaagaa ggatctggcc acctttctgt accacctgcg cattgaggca 2760 gaagtggaag tggtggagat gcacgacagt gacatatctg cctatacata tgagcgcacc 2820 ctgatgatgg agcagaggtc ccagatgctt cggcatatgc ggctgtccaa aacagagcga 2880 gacagggagg cacagctggt gaaagatcga aactcaatgc tacgcttgac cagcattggc 2940 tctgatgagg acgaagagac agaaacgtac caggagaagg tgcacatgac ttggaccaag 3000 gataaataca tggcatcccg ggggcaaaag gtcaagtcaa tggaaggatt ccaggaccta 3060 cttaatatgc gtccggacca gtccaacgtg agacggatgc atacagcagt gaagctcaat 3120 gaagttatag tcaacaagtc tcatgaagca aagctggttt tgttgaatat gccaggacca 3180 ccccggaacc ctgaaggtga tgaaaactac atggaatttc tagaagtgct cactgaggga 3240 ttagaacgag tccttcttgt ccggggtggt ggcagtgagg tcatcaccat ttactcataa 3300 tcagctgtgg gagattctgc gtggtccgac ttccctaaga ctcatcgtcc atggagatga 3360 tagctctttc ctaccactcc cactctattc ttgcagagct gagccccatc tatgctcttg 3420 gctgcaacat gatctgccat cccagcagaa acaaataatc cctcaacaga agaatggtca 3480 agtcctaaaa gctatttcta tggcaggaga aggcaagtca aaattaacaa gctaagccaa 3540 agggaacctt ttggcacaca gaaggtaatg agttagtaaa acatatgcta gaaatgtaac 3600 tggcaacaga aagcaatgtt catatctaac attcaggacg agtttcagaa gacacgggtc 3660 agtgagcacc agaaagttaa caggcagtta agcttcacct tagtaaaaaa tgagttccca 3720 ttatagagac agcctgcagc agccaggatg gaaacaggat actgatatat aaaacctgag 3780 acatagctgc agccactact tcttcctcat ggtttattgt ctgtactgta ccactgtaca 3840 ttttaactgt ctttgtttta aaacccattc tgtggttata atgcagacag tagtgttact 3900 atagaaatgt ttttttgaaa ggctagaaat gttttttcag gttttcaaat gctgaactaa 3960 ggggattcca aagagtgcgt attaaaatat atagaaacac agtggttagc tatgcaacat 4020 aaagcacaca agctattatc ttaacaaatg tgggttgtta tgtagttaac cagaagggtc 4080 tcttctactc ttagtaggca ttggtcttaa aaaccaaaca aaccaaacct gtaaggaaga 4140 gacgccaggg ctgtgtgatg ccacctccaa ggccccaggg ttcagaggtt cagcagtgga 4200 actgggggtg tgaaagccat accctttcca ctgtgccaaa atcgtctgct cactggcaga 4260 caggtttgca agtggcctga cacaagcacc ttttctttca caagaaatcc atctgtggcc 4320 tcttcaccaa agccatagtg cagatttgag gcactcgacc tccatgccca gagcttttcc 4380 cgtctcaata ttattattat tcattctgac ttcggaaact tggctctgaa acaaatggtt 4440 cactaagcta atgatctgct gtattggttt tgctttcaaa aagctctaac tgtgccaagg 4500 aaatacttgt gtaagatcag attttttttt tttttttaat ttactgatca caaacacttg 4560 gcttaccagc ataggcagcc tttgtggctg agcagtattc ccagggtgtg aaacctccat 4620 accctttcca agatagttac tgaagaaact gtcttcttgc ttagattcac ggctgctttt 4680 acatttcctt tcactgacag taaattgtgc cactctccat accctgtagg acaatgaaca 4740 cccagaattc aacccaagac agaagaaaac cctcaaatat ggcttaagaa gctgagtcat 4800 atggtttgtt cttcctcctc ccaggcccac ttgagtagca aaggatccag catgttttcc 4860 tttgcttcct gcagagggta gaaactactc gtagttctct ttccaacact ccattgcata 4920 cttgagtata atcccctagg ctccaaggca ttggagcgcc cattctgtaa aagccagcct 4980 gcccaggaac tgcctaacac atccacccct gaccaaagtg acacatactt tttccatatc 5040 aaacaaacat gggaagagaa taaggtttct ttaagaaagg ctgtttgtgg ttagagctac 5100 ataagaatct gttaaagggt agagtatagt cttcattccc caagataaaa atcactgtta 5160 catggacaaa tggttattag gccagatttg tactcatctc tgtctagaac atttcatgtc 5220 tatgtgttgc ttatgttgtc tgtctgcaaa gtgtcttagc tcttttaatc actgcaaata 5280 aagcaatact gaaaacttga gagagaaaat gcaccttagg ggaaggggcc aaatgtttct 5340 agagggaaga ggaagacctt ctcctgcctt tcttataaga cccagcttgt gtcttaccca 5400 tgagtttatt agcagggcag gctgtaacat tcgttctccc ccaactggtc ctcagccttc 5460 cgtagctacc ttaaaagctg gagtttgaat tgcagggcct ggttgacagg tgccagcttc 5520 ctcgtggcag agcaaaagct gctgcttttc atattctgtg cctccttttc ttgtggcccc 5580 aaggatccca ccaatcctca ttccccctaa atgttaaaag aaaattcctt attgtggata 5640 ttaagttaca ctgtaagcat atttacatgc tctttttccc ccctggtttt tcttttcatc 5700 atgtataatt tgaatccagt gatagtctca catcttccaa aaaagtctgc ttatgtgata 5760 tagaagagaa atattaaagt agactgaagg ggaacttgtg aaacattaag cattgttctc 5820 aaccgtttaa tttattgaaa ggagaagctg ctactgagca gctgctattc ttttgtttac 5880 atagagtctg gttttgtttg ttttgctctg tgctgggaac ataaataaag ttttctacat 5940 tattttcaaa aaaaaaaaaa aaaa 5964 //