Dbfetch
ID AF186382; SV 1; linear; mRNA; STD; HUM; 3208 BP. XX AC AF186382; XX DT 18-DEC-2000 (Rel. 66, Created) DT 07-OCT-2008 (Rel. 97, Last updated, Version 2) XX DE Homo sapiens vacuolar protein sorting 35 mRNA, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3208 RX DOI; 10.1006/geno.2000.6380. RX PUBMED; 11112353. RA Zhang P., Yu L., Gao J., Fu Q., Dai F., Zhao Y., Zheng L., Zhao S.; RT "Cloning and characterization of human VPS35 and mouse Vps35 and mapping of RT VPS35 to human chromosome 16q13-q21"; RL Genomics 70(2):253-257(2000). XX RN [2] RP 1-3208 RA Yu L.; RT ; RL Submitted (14-SEP-1999) to the INSDC. RL Lab of Human Gene Research, Institute of Genetics, Fudan University, No. RL 220 Handan Rd., Shanghai 200433, P.R.China XX DR MD5; d549bb9ae37ec12660a44d7c668f95b2. DR Ensembl-Gn; ENSG00000069329; homo_sapiens. DR Ensembl-Tr; ENST00000299138; homo_sapiens. XX FH Key Location/Qualifiers FH FT source 1..3208 FT /organism="Homo sapiens" FT /mol_type="mRNA" FT /db_xref="taxon:9606" FT CDS 54..2444 FT /codon_start=1 FT /product="vacuolar protein sorting 35" FT /note="VPS35" FT /db_xref="GOA:Q96QK1" FT /db_xref="H-InvDB:HIT000072918.13" FT /db_xref="HGNC:HGNC:13487" FT /db_xref="InterPro:IPR005378" FT /db_xref="InterPro:IPR016024" FT /db_xref="InterPro:IPR042491" FT /db_xref="PDB:2R17" FT /db_xref="PDB:5F0J" FT /db_xref="PDB:5F0K" FT /db_xref="PDB:5F0L" FT /db_xref="PDB:5F0M" FT /db_xref="PDB:5F0P" FT /db_xref="PDB:5OSH" FT /db_xref="PDB:5OSI" FT /db_xref="UniProtKB/Swiss-Prot:Q96QK1" FT /protein_id="AAG40619.1" FT /translation="MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKH FT ASNMLGELRTSMLSPKSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNI FT IPRLYLLITVGVVYVKSFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPD FT EGEPTDEETTGDISDSMDFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGT FT NLVRLSQLEGVNVERYKQIVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNP FT FLRACAELHQNVNVKNIIIALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQ FT DMPSEDVVSLQVSLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELT FT RLLKIPVDTYNNILTVLKLKHFHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVD FT SIMNLVSTLIQDQPDQPVEDPDPEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHF FT GAGGNQRIRFTLPPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAEL FT AELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTF FT ERMKCFSEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGK FT RVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIRED FT LPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGLIL" FT regulatory 2613..2618 FT /regulatory_class="polyA_signal_sequence" XX SQ Sequence 3208 BP; 959 A; 623 C; 679 G; 947 T; 0 other; ggctatggac gcgcggggcg ggtgctgctt gctgcaggct ctggggagtc gccatgccta 60 caacacagca gtcccctcag gatgagcagg aaaagctctt ggatgaagcc atacaggctg 120 tgaaggtcca gtcattccaa atgaagagat gcctggacaa aaacaagctt atggatgctc 180 taaaacatgc ttctaatatg cttggtgaac tccggacttc tatgttatca ccaaagagtt 240 actatgaact ttatatggcc atttctgatg aactgcacta cttggaggtc tacctgacag 300 atgagtttgc taaaggaagg aaagtggcag atctctacga acttgtacag tatgctggaa 360 acattatccc aaggctttac cttttgatca cagttggagt tgtatatgtc aagtcatttc 420 ctcagtccag gaaggatatt ttgaaagatt tggtagaaat gtgccgtggt gtgcaacatc 480 ccttgagggg tctgtttctt cgaaattacc ttcttcagtg taccagaaat atcttacctg 540 atgaaggaga gccaacagat gaagaaacaa ctggtgacat cagtgattcc atggattttg 600 tactgctcaa ctttgcagaa atgaacaagc tctgggtgcg aatgcagcat cagggacata 660 gccgagatag agaaaaaaga gaacgagaaa gacaagaact gagaatttta gtgggaacaa 720 atttggtgcg cctcagtcag ttggaaggtg taaatgtgga acgttacaaa cagattgttt 780 tgactggcat attggagcaa gttgtaaact gtagggatgc tttggctcaa gaatatctca 840 tggagtgtat tattcaggtt ttccctgatg aatttcacct ccagactttg aatccttttc 900 ttcgggcctg tgctgagtta caccagaatg taaatgtgaa gaacataatc attgctttaa 960 ttgatagatt agctttattt gctcaccgtg aagatggacc tggaatccca gcggatatta 1020 aactttttga tatattttca cagcaggtgg ctacagtgat acagtctaga caagacatgc 1080 cttcagagga tgttgtatct ttacaagtct ctctgattaa tcttgccatg aaatgttacc 1140 ctgatcgtgt ggactatgtt gataaagttc tagaaacaac agtggagata ttcaataagc 1200 tcaaccttga acatattgct accagtagtg cagtttcaaa ggaactcacc agacttttga 1260 aaataccagt tgacacttac aacaatattt taacagtctt gaaattaaaa cattttcacc 1320 cactctttga gtactttgac tacgagtcca gaaagagcat gagttgttat gtgcttagta 1380 atgttctgga ttataacaca gaaattgtct ctcaagacca ggtggattcc ataatgaatt 1440 tggtatccac gttgattcaa gatcagccag atcaacctgt agaagaccct gatccagaag 1500 attttgctga tgagcagagc cttgtgggcc gcttcattca tctgctgcgc tctgaggacc 1560 ctgaccagca gtacttgatt ttgaacacag cacgaaaaca ttttggagct ggtggaaatc 1620 agcggattcg cttcacactg ccacctttgg tatttgcagc ttaccagctg gcttttcgat 1680 ataaagagaa ttctaaagtg gatgacaaat gggaaaagaa atgccagaag attttttcat 1740 ttgcccacca gactatcagt gctttgatca aagcagagct ggcagaattg cccttaagac 1800 tttttcttca aggagcacta gctgctgggg aaattggttt tgaaaatcat gagacagtcg 1860 catatgaatt catgtcccag gcattttctc tgtatgaaga tgaaatcagc gattccaaag 1920 cacagctagc tgccatcacc ttgatcattg gcacttttga aaggatgaag tgcttcagtg 1980 aagagaatca tgaacctctg aggactcagt gtgcccttgc tgcatccaaa cttctaaaga 2040 aacctgatca gggccgagct gtgagcacct gtgcacatct cttctggtct ggcagaaaca 2100 cggacaaaaa tggggaggag cttcacggag gcaagagggt aatggagtgc ctaaaaaaag 2160 ctctaaaaat agcaaatcag tgcatggacc cctctctaca agtgcagctt tttatagaaa 2220 ttctgaacag atatatctat ttttatgaaa aggaaaatga tgcggtaaca attcaggttt 2280 taaaccagct tatccaaaag attcgagaag acctcccgaa tcttgaatcc agtgaagaaa 2340 cagagcagat taacaaacat tttcataaca cactggagca tttgcgcttg cggcgggaat 2400 caccagaatc cgaggggcca atttatgaag gtctcatcct ttaaaaagga aatagctcac 2460 catactcctt tccatgtaca tccagtgagg gttttattac gctaggtttc ccttccatag 2520 attgtgcctt tcagaaatgc tgaggtaggt ttcccatttc ttacctgtga tgtgttttac 2580 ccagcactcc ggacactcac cttcaggacc ttaataaaat tattcacttg gtaagtgttc 2640 aagtctttct gatcacccca agtagcatga ctgatctgca atttaaaatt cctgtgatct 2700 gtagcactta tcttggctac taatgaagct ctcctttttt ttgtttgttt gtttgcttca 2760 ttgttgattg tgtattttct tcattcctgg ggagtactaa cccaaaagcg tctgtctctt 2820 gttttctagt ccagtttgag attaatttag aagaaaggaa tactgtatgt gaaattcatc 2880 ttgggctttc ccctaaattg caagataagg ccatgtgtaa gattttccct aaaactagaa 2940 tatattaatg catgtttgag aattttaaag caccatggtc aaaaccagaa gctatatttt 3000 gcatatttgg actcagccat ccattaagaa cccatgttgt cctctggaca tatttatcaa 3060 tataattggg ttttaaatag tataaaagaa aacttgtgat ctatataatt tatgtatcac 3120 cttcattgta aatttagcag gaaatgcatc acaattatga tttttttttt tgcaccagtg 3180 aaacaataaa gatgctatta acaaaaaa 3208 //