Dbfetch
ID AF030199; SV 1; linear; genomic DNA; STD; MUS; 6973 BP. XX AC AF030199; XX DT 26-JAN-1998 (Rel. 54, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 2) XX DE Mus musculus type 1 sigma receptor gene, complete cds. XX KW . XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-6973 RX DOI; 10.1006/bbrc.1997.7840. RX PUBMED; 9425306. RA Seth P., Leibach F.H., Ganapathy V.; RT "Cloning and structural analysis of the cDNA and the gene encoding the RT murine type 1 sigma receptor"; RL Biochem. Biophys. Res. Commun. 241(2):535-540(1997). XX RN [2] RP 1-6973 RA Seth P., Leibach F.H., Ganapathy V.; RT ; RL Submitted (15-OCT-1997) to the INSDC. RL Biochemistry, Molecular Biology, 15th Street, Augusta, GA 30912-2100, USA XX DR MD5; ca14f75fd9f0f758e5fdd5a6841889ec. DR Ensembl-Gn; ENSMUSG00000036078; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0028171; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AJ_G0028129; mus_musculus_aj. DR Ensembl-Gn; MGP_AKRJ_G0028092; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0028142; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0027880; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0028583; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0027325; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0027842; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0027986; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0027953; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0028094; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0027985; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0028641; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0027044; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0027401; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000059354; mus_musculus. DR Ensembl-Tr; ENSMUST00000071561; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0065163; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AJ_T0065196; mus_musculus_aj. DR Ensembl-Tr; MGP_AKRJ_T0065132; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0065117; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0064844; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0065603; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0065156; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0064755; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0064878; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0064826; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0065010; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0064826; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0065820; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0064675; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0064054; mus_musculus_wsbeij. XX FH Key Location/Qualifiers FH FT source 1..6973 FT /organism="Mus musculus" FT /strain="129SV" FT /mol_type="genomic DNA" FT /db_xref="taxon:10090" FT mRNA join(3269..3496,3622..3822,3956..4048,5018..6089) FT /product="type 1 sigma receptor" FT exon 3269..3496 FT /number=1 FT CDS join(3346..3496,3622..3822,3956..4048,5018..5244) FT /codon_start=1 FT /product="type 1 sigma receptor" FT /note="mSigmaR1" FT /db_xref="GOA:O55242" FT /db_xref="InterPro:IPR006716" FT /db_xref="MGI:MGI:1195268" FT /db_xref="UniProtKB/Swiss-Prot:O55242" FT /protein_id="AAB97683.1" FT /translation="MPWAAGRRWAWITLILTIIAVLIQAAWLWLGTQNFVFSREEIAQL FT ARQYAGLDHELAFSRLIVELRRLHPGHVLPDEELQWVFVNAGGWMGAMCILHASLSEYV FT LLFGTALGSHGHSGRYWAEISDTIISGTFHQWKEGTTKSEVFYPGETVVHGPGEATALE FT WGPNTWMVEYGRGVIPSTLFFALADTFFSTQDYLTLFYTLRAYARGLRLELTTYLFGQD FT S" FT exon 3622..3822 FT /number=2 FT exon 3956..4048 FT /number=3 FT exon 5018..6089 FT /number=4 XX SQ Sequence 6973 BP; 1753 A; 1675 C; 1648 G; 1896 T; 1 other; ctgggtattg tttgcttaca gcaactaaga ttacataccc taagtcatat agactggagc 60 catgttactg tctatcacac agctagtggt taaggctgag aggacgggat tatttattta 120 tgaggaactg tatttatgat ggaatgtgaa agggcaatga actagagagg tctcagtggt 180 cttagaaaat tgtcaactta gggataacat agaagccagc agctgtttca aaacacgttt 240 cctcaacctt tcatcctcaa ctagattact caaaactaac aaatacacaa cagttcacct 300 ccccagcctc tggtctctgt agcacaatat attgcaacat gggcaagtga aaggcaacag 360 agcaaagact tattagaatg gcttaaaggc ccagatagtc caacaatggc tgcctaccaa 420 tggaaggtcc aagaattcag tttttcagtc caatgaggct gatatctcag cttgtcttca 480 gtatatgctg gaatcccaaa gaagtaagct ctaatgccat gagaaggaat ggacttgcca 540 tcaagagcaa aggcaggtct gcaaagagga ggcacatctc ctacttctgt gtcccttata 600 taggctgcca gcagaaggta tggtccaaaa ttaataatgt atcttcctat ctcaacgatc 660 tggctcagaa gtaagtcttc ccacatcaga tggggttttt ttggttgttg ttgttggttt 720 ttttgttttg ttttgttttt tgttttgttt tgagacaggg cttctctgta tagccctggc 780 tgtcttggaa ctcactttgt agaccaggct ggccttgaac tcagaaatcc gcctgcctct 840 gcctcccgag tgctgggatt aaaggcatgc accaccacgc ccggctcaca tcaaatgatt 900 taattaaaga acaaaataaa ccctcacagg tgttttttga gtttcagatg tagtcaagtt 960 gatgaccaag aagaaccact atattatact tgtagtatta aaatccatcc tgcaagaatt 1020 cctttagcag gatggaaacc aactcaaaac agcttcagga agtccctgaa actgaccaaa 1080 tttactagac tcctccctgc tatagtaagc aataaatgct gagagtccca tttagacaaa 1140 gtgaagccaa gctgcaaaaa agtatcttga gaccagacta gtcctgaaga aacagactag 1200 tcaagctgct tgggagaggt ttagactaga gtctcttgaa aaggacacta caacctgtag 1260 agccttcagg ctgcttccag gttttgtgag ctgtcaccca tgctgggctg ggctttggtg 1320 atgcagctgt ctttgactct gatttctgtt cctgcaagta actcctcacc cacagtccag 1380 caagtaaccc caataaaact cattagttca ccaaattgga ttttggtggt atctgtactt 1440 tcaattgtca taggctccct atctgaagtg tgttgtgttt cctcaggaaa cattttgtca 1500 cacaacaata agtcttctga aattgggcaa aggtgaaaaa gagagaggac agaatttctt 1560 ttttttttaa atatatgtat tggtgttttg cctgcatgta tgccagtata tcatgtgggt 1620 acaattccca cagaggctag aaggagtcaa atctactgga actgagctac aaacagttgt 1680 gagccaccat atgcatgcta tgaatcaaat caagatcctc tggaaaagca gaagagcagc 1740 tagtgctgtt aaccacggag gcatctctcc agcctcaaga tttcacatat ttttagaaac 1800 tagacctgaa aatgtcttac agcatttctg tttccatttt attatctgga ataaaaccac 1860 ctgggtacat ggccccatat acagagatta tagaatgtat tttggtcgct caagagcaaa 1920 aggaaagccg ggcatggtgg cgcacacctt taatcccagc actcagaagg cagaagcagg 1980 cagatttctg agttcaaggc cagcctggtc tacaaagtga gttccaggac agccagggct 2040 atacagaaga aaccctgtct caaaacaaaa caaaacaaaa caaaacaacc aaaaaaaaaa 2100 gcaaaaagaa atgtctctgc cacataaaaa tgccatgaaa agccattccc catgtttcgt 2160 gaacccctcc cttatatttg cctgatggat ttcattccat cagttctttg tgttctagct 2220 cctttatggg tttggctgtt gttcttgttg ttgctttaga catggtttcc tgaggcctct 2280 gctgactttt gctatggtga ccttgaactg atcttggtgc cttcccacgt tctagaatta 2340 caagcaatac atgtcttaca ttgtcttttt ctaactaaca tgtataatcc taaccatgtg 2400 ccaggcacta attactttaa aaaattaatt catttaatgt taatcataat gaaggtatgg 2460 gctacgaagc agatactttt taatttagtc tatgttacag ataaagctat caatgcatac 2520 tcttaaatgc tgacacatat gggctctctg tcttagatct tagtccaatt ttgctcccct 2580 cctctattta gcccagaatc attctgtgtc aacatcgaat cccatagctc cccagtggac 2640 aaatctattg gttttcaagg tctttcacac ttttgtgctt cagaacatag aatgaatcat 2700 aggatcggag aaaacactaa gctaaacatg catggtggtg cgcgcccctg atcccagtat 2760 tggagaggca tcgatcgagg ctatcctagt ctataggcta gctaaagttg tctaaaatat 2820 tacaaatata tgtacacata catatataca taaatgcatg tatgctgtct cacactcctc 2880 tgctctttga ctcctggaat agttcccatt gactctctct ctctctcatg gacacttcag 2940 atatcaccgc ttctttccta aggttcccag tggcactatc ttcaacctgc ttctgtgcta 3000 gcagacctag aaagctctac ttctgggctc gctagctcag gtgggccagt ccattctggg 3060 tctccccgct tggggacacc aagattgaac ccaacagggt ggcagccagg aggcgaggcc 3120 ccgcctctca cctctcttgc agaccaagcc actaaaccta cgctctcccc tctagaaaat 3180 ggttcaatcc agaggcggtg ctaggtgacc cggacgttcc gattggcccc ggcgagccgt 3240 accacggtgg cgggggcgac cgtaggcagc ggcttttgag tcgtgaaccc acagcctgtg 3300 gccctagttc ggtcttacgt tggtggtgcc aggctgcccg ctagaatgcc gtgggccgcg 3360 ggacggcggt gggcatggat caccctgatt ctgactatta tcgcagtgct gatccaggcc 3420 gcctggttgt ggctgggcac tcaaaacttc gtcttctcta gagaagaaat agcgcagctt 3480 gctcgacagt atgcgggtga gccggtgagg gcggagagtg gggtggccga cacggagcgg 3540 agccgcgctt tccgagggct ggtcctcgcc aagcttcaga ccgcgggctg gtctcacccg 3600 cgcttctcct ttttgcacca gggctggacc atgagcttgc cttctctcgg ctgatcgtgg 3660 agctgcggag gctgcaccca ggccacgtgc tgccggatga ggagctgcag tgggtatttg 3720 tgaacgcggg cggctggatg ggcgccatgt gtattctgca cgcctcgctg tctgagtacg 3780 tgctgctctt cggcaccgcc ctgggctccc atggccattc gggtcagtgt tggcggtggg 3840 tcggattggg aggctgggac tgttcgaggg ccggtgccct ccattccaag gtttggctgg 3900 gccgtgtatt gacaaggatt ccctgatggt cggtgtctat tttactgtca atcaggacga 3960 tactgggctg agatttctga caccatcatc tctggcacct tccaccaatg gaaagagggc 4020 accacgaaaa gtgaggtctt ctacccaggt gcgtaaggaa gttctgtccg agggggcgcc 4080 ctctagatag ggacgggcat aagacttgga aagggcgtgt ttaagaaggc ctaccagtga 4140 tttccttcct tccctccctg gtaagccaca ggtgtttcgt tagggtcgag ctaggaaccc 4200 tgatgctttc gactgttaag ggaaacagaa cacggcagtt tccaagtcat agagaacttg 4260 atttttttta tcagcctgtt taacccagca attatctggg ttatacccaa aagttaagac 4320 aggcatttgt ttccttaaac tagagtggca gtttggggtt tttgtatttt tgttattgtt 4380 tgtttttatg cgtctgggtt ttgcttacac acaccaaccc cttaactgcc tggtgcctta 4440 aaggccagaa gagggcatct gatcccagag actgaagtta tagactgttg tgagccttca 4500 tgtgggtgct gggaagtgaa cctgggtcct ctggagtagg agccagggca cagctgagcc 4560 atctggctag caaactcctg gtggtgtttt tttaatgtac ctctgaatct gtttaaaaga 4620 aaaaaaggcg tgggcttgct ggtgtaaggt taagcatcac actttgtgac tgaacaggcg 4680 catttctcag agagcctggc aagccctgta accacacaga atttccacca gatatgattg 4740 cagcttggaa atgcagatgc cataattcta tacgttagcc tgtagctggg ttggggtggc 4800 cttccaaggg ccaggtgatg ccattggtat aagtgttttg gtctttgtcc tctgatcaag 4860 cagcttggca tagggtagaa gaactttttc ttttcttgaa actgtctttt cattcccctc 4920 ctctccatag atagcccata ggctagacaa atgcagtatg gaaggccagg gcagagctgg 4980 gctcctcatg aggtttctta tcctgtctgt ctcccaggag agacagttgt acacgggcct 5040 ggagaagcaa cggctctgga gtggggacca aacacgtgga tggtggagta cggccggggt 5100 gttattccgt ctaccctgtt ctttgcacta gccgacactt tcttcagcac ccaggactac 5160 ctcacactct tctataccct tcgggcctat gcccggggcc tccggcttga gcttaccacc 5220 tacctctttg gccaagactc ctgaccagcc aggcctgaag gaagatctgt ggatggacag 5280 gagcgcggca ggaccacatc catctctcta ctcgctggaa ctcatattca gacagcagcg 5340 tataccatgc agatattaag tacctgctgt atgaggaagg acatacatac ttgtacatcc 5400 agacacagct cttgggaagc aaatgagaca cagagatgct aagacttgta tgtactgtaa 5460 gatcatgcac tcacatccac ccagaaaggg tcctctacat atactccagg gggccagtca 5520 tgtttgaaca cacatcacaa gcttgactca ctgactcagg ctttcctaga gcctcctgct 5580 ggcattcagg gctctgggat caagggttga ggtagatgtt acacactacc tcactctgat 5640 gcctcattcc tgtagtaatc tctggtgaag ggaaagagga gctgcccttc ggaggtcccc 5700 ttcacctgca gctatgatgc ccttcccttc atccctttcc tcaccatatg ccttatctcc 5760 attccactcc cctgctatgc aaatgccccc ctggcttgtc ctccctgccc ccccccggca 5820 accagttcag ctgggaaagc agaggnatgt agaggatgct aaagggaagg gaggtcctcc 5880 actacggaga cccttgttgg ggttagattg gaaaagctgg ctagtgcccc agggcccagt 5940 tcccaaggag aggacctgga gaagtaagcc ggggtccaag gagccacccc attccaaaag 6000 aagcctttag tgtgtgtgtg cacaccctat cagtttccag acatatctgt tgcaatctct 6060 gtcttcttgt ctctctctgt taataaaaac atattaaaca gtttcgtttc cttatgtgtc 6120 taaacagcag ggaagccagc tgcctcctgg ggcactaaaa ggcctcctgt acaatccagt 6180 ttgtaagaca aggtttagac agaagggagt gtgctaagaa ttactttgaa gtcagccttc 6240 taggggtggt ggtgttaaac ctttggctct agactcagct ctgcctgctg ttggcatctg 6300 agtgttggaa ctggaagtga gcaccaccac acccagagtg ccccccccca ccccccgcaa 6360 tataaagctg acttagaatt tacgatgtga tactgaaatt caccgtgaac ttaacctcca 6420 gcttccactt cctaggactg agaattaagg ccaaggcttt gtgcagtctg ggcaagcgct 6480 gtgctaacca cacccttaga agacagatga gtcactgagg ctggctggct tgcatctata 6540 gagataaatt ttttttttaa ttttatttct ttttttatat gagtacactg cagctgtctt 6600 cagacacaca ctagaagggt gctttggatt ccatgacaga tggttgtgag ctaccatgtg 6660 gttgctggga tttgaactca ggatctctga cagagcagtc agtgttctta tctgctgagc 6720 cgtctctcca gcccctcgag ataagttttt gaatatgaaa aaatgagacc cgtgtgtcta 6780 ctttgctagt ctgtcctaga ggtggtcctg agaacttcac tgcacatggc catggggtgg 6840 cactgtgctc ccacatttga gctgaaacag acctcagctg gttcttccgg gctgacagaa 6900 tagagtacac cactaactgg aacaagagtt cctctgctct ggtttgcctt tgacccagca 6960 cttattgcga gct 6973 //