Dbfetch
ID AB259049; SV 1; linear; mRNA; STD; MUS; 6510 BP. XX AC AB259049; XX DT 19-AUG-2006 (Rel. 88, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 3) XX DE Mus musculus CaV1.2-a mRNA for voltage-dependent calcium channel splice DE variant 1.2-a, complete cds. XX KW . XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-6510 RA Murakami M.; RT ; RL Submitted (03-MAY-2006) to the INSDC. RL Manabu Murakami, Akita University School of Medicine, Deaprtment of RL Pharmacology; 1-1-1 Hondoh, Akita 010-8543, Japan RL (E-mail:mmura0123@hotmail.co.jp, Tel:81-18-884-6067, Fax:81-18-836-2603) XX RN [2] RX DOI; 10.1016/j.yjmcc.2006.05.002. RX PUBMED; 16787652. RA Murakami M., Ohba T., Takahashi Y., Watanabe H., Miyoshi I., Nakayama S., RA Ono K., Ito H., Iijima T.; RT "Identification of a cardiac isoform of the murine calcium channel alpha1C RT (Cav1.2-a) subunit and its preferential binding with the beta2 subunit"; RL J. Mol. Cell. Cardiol. 41(1):115-125(2006). XX DR MD5; e2b1efe1bf8096488f7a8bd53b1f5cbc. DR Ensembl-Gn; ENSMUSG00000051331; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0031189; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AJ_G0031158; mus_musculus_aj. DR Ensembl-Gn; MGP_AKRJ_G0031089; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0031169; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0030540; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0031627; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0030276; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0030852; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0031008; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0030960; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0031087; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0030994; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0031656; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0029991; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0030359; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000186889; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0079664; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AJ_T0079727; mus_musculus_aj. DR Ensembl-Tr; MGP_AKRJ_T0079653; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0079671; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0077610; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0080144; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0079884; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0079251; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0079407; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0079290; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0079443; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0079298; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0080396; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0079313; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0078403; mus_musculus_wsbeij. XX FH Key Location/Qualifiers FH FT source 1..6510 FT /organism="Mus musculus" FT /mol_type="mRNA" FT /tissue_type="heart" FT /db_xref="taxon:10090" FT CDS 1..6510 FT /gene="CaV1.2-a" FT /product="voltage-dependent calcium channel splice variant FT 1.2-a" FT /db_xref="GOA:Q0PCR6" FT /db_xref="InterPro:IPR002077" FT /db_xref="InterPro:IPR005446" FT /db_xref="InterPro:IPR005451" FT /db_xref="InterPro:IPR005821" FT /db_xref="InterPro:IPR014873" FT /db_xref="InterPro:IPR027359" FT /db_xref="InterPro:IPR031649" FT /db_xref="InterPro:IPR031688" FT /db_xref="MGI:MGI:103013" FT /db_xref="UniProtKB/TrEMBL:Q0PCR6" FT /protein_id="BAF03165.1" FT /translation="MIRAFVQPSTPPYQPLSSHSSEETERKFKGKVVHEAQLNCFYISP FT GGSNYGSPRPAHANMNANAAAGLAPEHIPTPGAALSWQAAIDAARQAKLMGSAGNATIS FT TVSSTQRKRQQYGKPKKQGGTTATRPPRALLCLTLKNPIRRACISIVEWKPFEIIILLT FT IFANCVALAIYIPFPEDDSNATNSNLERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLR FT NGWNLLDFIIVVVGLFSAILEQATKADGANALGGKGAGFDVKALRAFRVLRPLRLVSGV FT PSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTCYNQEGIIDVPAE FT EDPSPCALETGHGRQCQNGTVCKPGWDGPKHGITNFDNFAFAMLTVFQCITMEGWTDVL FT YWMQDAMGYELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQ FT QLEEDLKGYLDWITQAEDIDPENEDEGMDEDKPRNMSMPTSETESVNTENVAGGDIEGE FT NCGARLAHRISKSKFSRYWRRWNRFCRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHY FT NQPHWLTEVQDTANKALLALFTAEMLLKMYSLGLQAYFVSLFNRFDCFIVCGGILETIL FT VETKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIII FT FSLLGMQLFGGKFNFDEMQTRRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPS FT FPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEEKERKKLARTA FT SPEKKQEVMEKPAVEESKEEKIELKSITADGESPPTTKINMDDLQPSENEDKSPHSNPD FT TAGEEDEEEPEMPVGPRPRPLSELHLKEKAVPMPEASAFFIFSPNNRFRLQCHRIVNDT FT IFTNLILFFILLSSISLAAEDPVQHTSFRNHILGNADYVFTSIFTLEIILKMTAYGAFL FT HKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKILRVLRVLRPLRAINRAKGLKHV FT VQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKLYTCSDSSKQTEAECKGNYITYK FT DGEVDHPIIQPRSWENSKFDFDNVLAAMMALFTVSTFEGWPELLYRSIDSHTEDKGPIY FT NYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALK FT ARPLRRYIPKNQHQYKVWYVVNSTYFEYLMFVLILLNTICLAMQHYGQSCLFKIAMNIL FT NMLFTGLFTVEMILKLIAFKPKGYFSDPWNVFDFLIVIGSIIDVILSETNPAEHTQCSP FT SMSAEENSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFF FT IYAVIGMQVFGKIALNDTTEINRNNNFQTFPQAVLLLFRCATGEAWQDIMLACMPGKKC FT APESEPSNSTEGETPCGSSFAVFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILG FT PHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMP FT LNSDGTVMFNATLFALVRTALRIKTEGNLEQANEELRAIIKKIWKRTSMKLLDQVVPPA FT GDDEVTVGKFYATFLIQEYFRKFKKRKEQGLVGKPSQRNALSLQAGLRTLHDIGPEIRR FT AISGDLTAEEELDKAMKEAVSAASEDDIFRRAGGLFGNHVTYYQSDSRGNFPQTFATQR FT PLHINKTGNNQADTESPSHEKLVDSTFTPSSYSSTGSNANINNANNTALGRFPHPAGYS FT STVSTVEGHGPPLSPAVRVQEAAWKLSSKRCHSRESQGATVNQEIFPDETRSVRMSEEA FT EYCSEPSLLSTDMFSYQEDEHRQLTCPEEDKREIQPSPKRSFLRSASLGRRASFHLECL FT KRQKDQGGDISQKTALPLHLVHHQALAVAGLSPLLQRSHSPTTFPRPCPTPPVTPGSRG FT RPLRPIPTLRLEGAESSEKLNSSFPSIHCSSWSEETTACSGSSSMARRARPVSLTVPSQ FT AGAPGRQFHGSASSLVEAVLISEGLGQFAQDPKFIEVTTQELADACDMTIEEMENAADN FT ILSGGAQQSPNGTLLPFVNCRDPGQDRAVAPEDESCAYALGRGRSEEALADSRSYVSNL FT " XX SQ Sequence 6510 BP; 1553 A; 1828 C; 1679 G; 1450 T; 0 other; atgattcggg cctttgttca gccatccaca cccccatacc agccactctc cagtcactcg 60 tctgaggaaa cagagaggaa gttcaagggc aaggtggtac atgaagctca actcaactgt 120 ttctacattt ctcctggagg ttccaactat gggagcccac gcccagctca tgccaacatg 180 aatgccaatg cagctgcagg acttgctccc gagcacatcc ctactccagg ggcagcactg 240 tcctggcagg cagccatcga tgccgcccgg caggccaagc tcatgggcag tgctggcaac 300 gcaaccatct ctaccgtcag ttccacacag cggaagcggc agcagtatgg gaaacccaag 360 aagcaggggg gcacaaccgc cacacggccg ccccgggctc tgctgtgtct gaccctgaag 420 aaccctatcc ggagggcgtg cataagcatt gttgaatgga aaccatttga aatcattatt 480 ttactgacta tttttgccaa ttgtgtggcc ttagcaatct atattccctt tccggaagac 540 gactccaacg ccaccaactc caacctggaa cgagtggagt atctcttcct catcattttt 600 accgtggaag catttttaaa agtaattgcc tacggacttc tcttccaccc caacgcttac 660 ctccgcaatg gttggaattt actggatttt ataatcgtgg ttgtagggct ttttagtgca 720 attttagaac aagcaaccaa agctgatggg gccaatgctc taggagggaa aggagctgga 780 ttcgacgtga aggcactgag agcgttccgc gtgctccgtc cactgcggct agtgtccgga 840 gtcccaagtc tccaggtggt cctgaactcc atcatcaagg ccatggtgcc tctgctgcac 900 attgcccttc ttgtgctctt cgtcatcatc atttatgcta ttatcggcct ggagctcttc 960 atgggaaaga tgcacaagac ctgctacaac caggagggca taatagatgt tccggcagaa 1020 gaggatcctt ccccttgtgc tttggagaca ggccatgggc gacagtgtca gaacgggacc 1080 gtgtgcaaac ccgggtggga tgggcccaag cacggcatca ccaacttcga caacttcgcc 1140 ttcgccatgc tgacggtgtt ccagtgtatc accatggagg gctggacaga cgtgctgtac 1200 tggatgcaag acgctatggg ctatgagttg ccctgggtgt attttgtcag tctggtcatc 1260 tttggatcct ttttcgttct aaatctggtt ctcggtgttt tgagcgggga gttttccaaa 1320 gagagggaga aagccaaagc ccgaggagat ttccagaagc ttcgagagaa gcagcaacta 1380 gaagaagatc tcaaaggcta cctggactgg atcacccagg cagaagacat tgaccccgag 1440 aatgaggacg agggcatgga tgaagacaag cctcgaaaca tgagcatgcc cacaagtgag 1500 actgagtctg tcaacactga aaacgtggct ggaggtgaca tcgagggaga aaactgtgga 1560 gccaggcttg cccatcggat ctccaaatcc aaattcagcc gctactggcg caggtggaat 1620 cgattctgca gaagaaaatg ccgtgcagca gttaagtcca acgtcttcta ctggctcgtg 1680 atcttcctgg tgttcctcaa caccctcacc attgcctccg aacattacaa ccagcctcac 1740 tggctcacag aagtgcaaga cacagccaat aaagccctcc tggccctttt cactgcagaa 1800 atgctcctga agatgtacag cctgggtctt caggcctatt ttgtgtccct cttcaaccgc 1860 tttgactgtt tcattgtgtg tgggggcatc ctggagacca tcctggtgga gacgaagatc 1920 atgtctcccc tgggcatctc tgtgctgaga tgtgtgcggt tgctcaggat cttcaagatc 1980 accaggtact ggaattcctt gagcaacctt gtggcatcct tgctgaactc agtgcgctcc 2040 attgcctccc tgctgctgct cctcttcctc ttcatcatca tcttctccct cctggggatg 2100 cagctctttg gagggaagtt caatttcgat gagatgcaga cccgtaggag cacgttcgat 2160 aacttcccgc agtctctcct cactgtgttt cagatcctga ccggggagga ctggaattcg 2220 gtgatgtatg atgggatcat ggcttatggc ggcccctctt ttccagggat gttagtctgt 2280 atttacttca tcatcctctt catctgtgga aattatatcc tactgaatgt gttcttggcc 2340 attgcggtgg acaacctggc tgatgcggag agcctgacct cagcccaaaa ggaggaggaa 2400 gaagagaagg agaggaagaa gctggccagg actgccagcc cagaaaagaa acaggaggtg 2460 atggagaagc cagccgtgga ggagagcaaa gaggagaaaa ttgaactgaa atccattaca 2520 gccgatggag aatccccacc cactaccaag atcaacatgg atgacctcca gcccagtgaa 2580 aacgaggata agagtcccca ctccaaccca gacactgcag gggaagagga tgaagaggag 2640 ccagagatgc ctgtggggcc acgcccccgg cccctgtctg agctgcacct taaggaaaag 2700 gcagttccca tgccggaagc cagtgcattt ttcatcttca gcccaaacaa caggttccgc 2760 ctgcagtgcc accgtattgt caatgacacg atcttcacca acctcatcct cttcttcatt 2820 ctgctcagca gcatctctct ggctgctgag gaccccgtcc agcacacctc cttcaggaac 2880 catatcctag gcaatgcaga ctatgtcttc actagtatct ttacattaga aattatcctt 2940 aagatgactg cttacggggc tttcctgcac aagggctctt tctgccgaaa ctacttcaat 3000 atcctggacc tgctggtggt tagcgtgtcc ctcatctcct ttggcatcca gtccagcgcg 3060 atcaacgttg tgaagatttt acgagtgctg cgagtcctca gacccctgag ggccatcaac 3120 agggccaagg ggctaaagca tgtggttcag tgcgtgtttg tggccatccg gaccatcggg 3180 aacatcgtaa ttgtcaccac tctgctgcag ttcatgttcg cctgcattgg ggtccagctc 3240 ttcaagggaa agctctatac ctgttcggat agttctaaac agacggaggc agaatgcaag 3300 ggtaactata tcacatacaa agatggagag gtcgatcacc ccattatcca gcctcgaagc 3360 tgggagaaca gcaagtttga ctttgacaat gttttggcag ccatgatggc tctcttcacc 3420 gtctccacct tcgaagggtg gccagagctg ctgtaccgct ccattgactc ccacacagaa 3480 gacaagggcc ccatctacaa ctaccgtgtg gagatctcca tcttcttcat catctatatc 3540 atcatcattg ccttcttcat gatgaacatc ttcgtgggtt tcgtcattgt caccttccag 3600 gagcaggggg aacaagagta caagaactgt gagctggaca agaaccagag acaatgtgtg 3660 gaatatgccc tcaaggcccg acccttgcga aggtacatcc ccaagaacca gcaccagtac 3720 aaagtgtggt acgtggtcaa ctctacctac ttcgagtatc tgatgttcgt tctcatcctg 3780 ctcaacacca tctgcctggc catgcagcac tatggccaga gctgcctctt caaaatcgcc 3840 atgaatatac tcaacatgct tttcaccggc ctcttcacag tggagatgat cctgaagctc 3900 attgccttca aacccaaggg ttactttagt gatccctgga atgtttttga cttcctcatc 3960 gtcattggga gcataattga tgtcattctc agtgagacta atccagctga acatacccaa 4020 tgctctccct ctatgagtgc agaggagaac tcccgcatct ccatcacctt cttccgcctc 4080 ttccgggtca tgcgcctggt gaagctgctg agccgcgggg aaggcatccg aaccctgctg 4140 tggaccttca tcaagtcctt ccaggctctg ccctatgtgg ctcttttgat tgtgatgctg 4200 ttctttatct atgcagtgat tgggatgcag gtgtttggga agattgccct gaatgacacc 4260 acagagatca atcggaacaa caacttccag acgttccccc aggctgtgtt actgctgttc 4320 aggtgtgcca ccggagaggc ctggcaggac atcatgctgg cctgcatgcc aggcaagaag 4380 tgtgccccag agtctgagcc cagcaacagc acggaagggg agaccccctg tggcagcagc 4440 tttgctgtct tctacttcat cagcttctac atgctctgtg ccttcctgat catcaacctc 4500 tttgtagctg ttatcatgga caactttgac tacctgacta gggattggtc tatcctcggt 4560 ccccatcacc tggatgaatt caagagaatc tgggccgagt atgaccctga agccaagggt 4620 cggatcaaac acttggatgt ggtgaccctc ctccgtcgaa ttcagccccc actgggtttt 4680 gggaaattgt gtcctcaccg tgtggcctgc aaacgcctgg tgtccatgaa catgcctctg 4740 aacagcgatg gcacagtcat gttcaatgct accctgtttg ccctcgtcag gacagccctg 4800 aggatcaaaa cagaagggaa cctagagcaa gccaatgagg agcttcgggc catcatcaag 4860 aaaatctgga agaggactag catgaagctg ttggaccagg tggtgccccc tgcaggcgat 4920 gacgaggtca cagtgggcaa gttctatgcc accttcctga tccaagagta cttcaggaaa 4980 ttcaagaagc gaaaagagca ggggctggtg ggcaagccct cacaaaggaa tgcactgtcc 5040 ctccaggctg gcttgcgcac cttgcatgac attgggcctg agatccggcg ggccatctct 5100 ggggatctga ctgctgagga ggagttggac aaggctatga aggaggcggt gtctgctgcc 5160 tccgaagatg acatcttcag gagggctgga ggcctgttcg gcaaccatgt cacctactat 5220 cagagtgaca gcaggggcaa ctttcctcag acgttcgcca cccagcgccc actgcacatc 5280 aacaagacag ggaacaacca agctgacact gagtcaccgt cccatgagaa gctggtggac 5340 tccacgttca cccccagcag ctactcatcc acgggctcca atgccaacat caacaatgcc 5400 aacaacactg ccctgggccg cttcccccat cccgctggct actccagcac ggtcagcact 5460 gtggagggcc atgggcctcc cttgtcccct gctgtccgag tacaggaggc agcatggaag 5520 ctcagctcta agaggtgcca ctcccgagag agccagggag ccacggtgaa tcaggagata 5580 tttccagatg agacccgcag cgtaaggatg agtgaagaag ccgagtactg cagtgagccc 5640 agcctgctct ccacagatat gttctcctac caggaagatg aacaccgaca actgacctgc 5700 ccagaggagg acaagaggga gatccagcca tctccaaaga ggagtttcct tcgctctgcc 5760 tctctaggtc gaagggcctc cttccatctg gaatgtctaa agcgacaaaa ggatcaaggg 5820 ggagacatct ctcagaagac agccttgccc ttgcatctgg ttcatcatca ggcattggca 5880 gtggcaggct tgagccccct cctgcagaga agccattctc ctaccacatt ccccaggccg 5940 tgccccacac cccctgtcac tccaggcagc cggggcagac ccctacggcc catccctacc 6000 ctacggctgg agggggcaga gtccagcgag aaactcaaca gcagcttccc atccatccac 6060 tgcagctcct ggtctgagga gacgacagcc tgtagtggga gcagcagcat ggcccggaga 6120 gcccggcccg tctccctcac cgtgcccagc caggctggag ctccagggag acagttccat 6180 ggcagtgcca gcagcctggt ggaagcggtc ttgatttcag aaggactggg acagtttgct 6240 caagatccca agttcatcga ggtcaccacc caggagctgg ctgacgcctg cgacatgaca 6300 atagaggaga tggagaacgc cgcagacaac atcctcagtg ggggcgccca gcagagcccc 6360 aacggcaccc tcttaccttt tgtgaactgc agggacccgg ggcaggacag ggctgtggcc 6420 ccagaggacg agagctgcgc atatgccctg gggcgaggcc ggagcgagga ggcgctcgcg 6480 gacagcaggt cctacgtcag caacctgtag 6510 //