Dbfetch
ID AB231013; SV 1; linear; mRNA; STD; MUS; 5201 BP. XX AC AB231013; XX DT 03-AUG-2005 (Rel. 84, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 3) XX DE Mus musculus shank3 mRNA for Shank3, complete cds. XX KW . XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-5201 RA Uchino S., Kohsaka S.; RT ; RL Submitted (01-AUG-2005) to the INSDC. RL Shigeo Uchino, National Institute of Neuroscience, Department of RL Neurochemistry; Ogawahigashi 4-1-1, Kodaira, Tokyo, 187-8502, Japan RL (E-mail:uchino@ncnp.go.jp, Tel:81-42-341-2712(ex.5232), Fax:81-42-346-1751) XX RN [2] RA Uchino S., Wada H., Honda S., Nakamura Y., Uchiyama T., Tsutsumi M., RA Hirasawa T., Kohasaka S.; RT "Shank3 mediates the interaction between PSD-95 and the GluR1 AMPA RT receptor"; RL Unpublished. XX DR MD5; 4684868fb6e626ecc795bce2ee4c3b13. DR Ensembl-Gn; ENSMUSG00000022623; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0022239; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AJ_G0022198; mus_musculus_aj. DR Ensembl-Gn; MGP_AKRJ_G0022173; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0022204; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0021974; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0022649; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0021496; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0021941; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0022068; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0022047; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0022139; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0022067; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0022664; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0021237; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0021545; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000039074; mus_musculus. DR Ensembl-Tr; ENSMUST00000230807; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0042261; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AJ_T0042222; mus_musculus_aj. DR Ensembl-Tr; MGP_AKRJ_T0042189; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0042218; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0041952; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0042698; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0042034; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0041859; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0042011; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0041983; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0042080; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0041951; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0042739; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0041623; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0041339; mus_musculus_wsbeij. DR EuropePMC; PMC3131048; 21558424. XX FH Key Location/Qualifiers FH FT source 1..5201 FT /organism="Mus musculus" FT /mol_type="mRNA" FT /db_xref="taxon:10090" FT CDS 1..5193 FT /codon_start=1 FT /transl_table=1 FT /gene="shank3" FT /product="Shank3" FT /db_xref="GOA:Q4ACU6" FT /db_xref="InterPro:IPR001452" FT /db_xref="InterPro:IPR001478" FT /db_xref="InterPro:IPR001660" FT /db_xref="InterPro:IPR002110" FT /db_xref="InterPro:IPR013761" FT /db_xref="InterPro:IPR020683" FT /db_xref="InterPro:IPR036028" FT /db_xref="InterPro:IPR036034" FT /db_xref="InterPro:IPR036770" FT /db_xref="InterPro:IPR041489" FT /db_xref="MGI:MGI:1930016" FT /db_xref="PDB:3O5N" FT /db_xref="PDB:5IZU" FT /db_xref="UniProtKB/Swiss-Prot:Q4ACU6" FT /protein_id="BAE16756.1" FT /translation="MDGPGASAVVVRVGIPDLQQTKCLRLDPTAPVWAAKQRVLCALNH FT SLQDALNYGLFQPPSRGRAGKFLDEERLLQDYPPNLDTPLPYLEFRYKRRVYAQNLIDD FT KQFAKLHTKANLKKFMDYVQLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLDNAT FT DLLKVLRNGGAHLDFRTRDGLTAVHCATRQRNAGALTTLLDLGASPDYKDSRGLTPLYH FT SALGGGDALCCELLLHDHAQLGTTDENGWQEIHQACRFGHVQHLEHLLFYGANMGAQNA FT SGNTALHICALYNQESCARVLLFRGANKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKD FT SDVVPFRETPSYAKRRRLAGPSGLASPRPLQRSASDINLKGDQPAASPGPTLRSLPHQL FT LLQRLQEEKDRDRDGELENDISGPSAGRGGHNKISPSGPGGSGPAPGPGPASPAPPAPP FT PRGPKRKLYSAVPGRKFIAVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTG FT WFPADCVEEVQMRQYDTRHETREDRTKRLFRHYTVGSYDSLTSHSDYVIDDKVAILQKR FT DHEGFGFVLRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGV FT NVVKVGHKQVVGLIRQGGNRLVMKVVSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKS FT MTAELEELASIRRRKGEKLDEILAVAAEPTLRPDIADADSRAATVKQRPTSRRITPAEI FT SSLFERQGLPGPEKLPGSLRKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDTVREGRGI FT PPPPQTAPPPPPAPYYFDSGPPPTFSPPPPPGRAYDTVRSSFKPGLEARLGAGAAGLYD FT PSTPLGPLPYPERQKRARSMIILQDSAPEVGDVPRPAPAATPPERPKRRPRPSGPDSPY FT ANLGAFSASLFAPSKPQRRKSPLVKQLQVEDAQERAALAVGSPGPVGGSFAREPSPTHR FT GPRPGSLDYSSGEGLGLTFGGPSPGPVKERRLEERRRSTVFLSVGAIEGSPPSADLPSL FT QPSRSIDERLLGTGATTGRDLLLPSPVSALKPLVGGPSLGPSGSTFIHPLTGKPLDPSS FT PLALALAARERALASQTPSRSPTPVHSPDADRPGPLFVDVQTRDSERGPLASPAFSPRS FT PAWIPVPARREAEKPPREERKSPEDKKSMILSVLDTSLQRPAGLIVVHATSNGQEPSRL FT GAEEERPGTPELAPAPMQAAAVAEPMPSPRAQPPGSIPADPGPGQGSSEEEPELVFAVN FT LPPAQLSSSDEETREELARIGLVPPPEEFANGILLTTPPPGPGPLPTTVPSPASGKPSS FT ELPPAPESAADSGVEEADTRSSSDPHLETTSTISTVSSMSTLSSESGELTDTHTSFADG FT HTFLLEKPPVPPKPKLKSPLGKGPVTFRDPLLKQSSDSELMAQQHHAASTGLASAAGPA FT RPRYLFQRRSKLWGDPVESRGLPGPEDDKPTVISELSSRLQQLNKDTRSLGEEPVGGLG FT SLLDPAKKSPIAAARLFSSLGELSTISAQRSPGGPGGGASYSVRPSGRYPVARRAPSPV FT KPASLERVEGLGAGVGGAGRPFGLTPPTILKSSSLSIPHEPKEVRFVVRSVSARSRSPS FT PSPLPSPSPGSGPSAGPRRPFQQKPLQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAH FT LPALTKEDFVELGVTRVGHRMNIERALRQLDGS" XX SQ Sequence 5201 BP; 1007 A; 1757 C; 1564 G; 873 T; 0 other; atggacggac ctggggccag cgccgtggtc gtgcgcgtcg gcatcccgga cctgcaacaa 60 acgaagtgcc tgcgtctgga cccaaccgcg cccgtgtggg ccgccaagca gcgtgtgctc 120 tgcgccctca atcatagcct tcaagacgcg ctcaactacg ggctattcca gcctccctcc 180 cggggtcgcg ccggcaagtt cctggatgaa gagcggctct tacaggacta cccgcctaac 240 ctggacacgc ccctgcccta tctggagttc cgatacaagc ggagagttta tgcccagaac 300 ctcatagatg acaagcagtt tgcaaagcta cacacaaagg caaacctgaa gaagttcatg 360 gactatgtcc agctacacag cacagataag gtggcccgcc tgctggacaa ggggctggac 420 cccaatttcc atgaccctga ctcaggagag tgccctctga gccttgcggc acagttggac 480 aacgccactg acctcctgaa ggttctccgc aacggcggtg ctcatctgga cttccggacc 540 cgagatgggc tgacagccgt ccactgtgct acccgccagc ggaacgcggg ggcattgacg 600 accctgctgg acctgggggc ttcgcctgac tacaaggaca gccgcggcct gacgcccctg 660 taccatagtg ccctaggggg cggggatgcc ctctgttgcg agctgcttct ccatgatcat 720 gcacagctgg ggaccactga tgagaatggt tggcaagaga tccatcaggc ctgtcgcttt 780 ggacacgtgc agcacctgga gcaccttttg ttctatgggg ccaacatggg tgctcagaat 840 gcctcgggaa acacagccct gcacatctgt gccctctaca accaggagag ctgcgcgcgc 900 gtcctgcttt tccgtggtgc caacaaggac gtccgcaatt acaacagcca gacagccttc 960 caggtggcca ttattgcagg gaactttgag cttgccgagg taatcaagac ccacaaagac 1020 tccgatgtcg taccattcag ggaaaccccc agctatgcaa agcgacggcg tctggctggc 1080 ccgagtggcc tggcatcccc acggccctta cagcgctcag ccagtgatat caacctgaaa 1140 ggtgatcagc ccgcagcttc tccagggccc actctccgaa gcctccctca tcaactcttg 1200 ctccagaggc ttcaggagga gaaagaccgt gacagggatg gtgaactgga gaatgacatc 1260 agcggcccct cagcaggcag gggtggccac aacaagatca gccccagtgg gcccggcgga 1320 tccggccccg cgcccggccc cggcccggcg tctcccgcgc cccccgcgcc gccgccccgg 1380 ggcccgaagc ggaaacttta cagtgccgtc cccggccgca agttcatcgc tgtgaaggcg 1440 cacagcccgc agggcgaggg cgagatcccg ctgcaccgcg gcgaggccgt gaaggtgctc 1500 agcattgggg agggcggttt ctgggaggga accgtgaagg gccgaacagg ctggttccca 1560 gctgactgtg tggaagaagt gcagatgcga cagtatgaca cccggcatga aaccagagag 1620 gaccggacga agcgtctctt ccgccactac actgtgggtt cctatgacag cctcacttca 1680 cacagcgatt atgtcatcga tgataaggtg gctatcctgc agaaaaggga ccatgagggg 1740 tttggctttg ttctccgggg agccaaagca gagaccccca ttgaggagtt tacacccaca 1800 cctgccttcc ctgcactcca ataccttgag tctgtagatg tggaaggtgt ggcctggagg 1860 gctggacttc gaactgggga cttcctcatt gaggtgaacg gagtgaatgt cgtgaaggtt 1920 ggacacaagc aagtggtggg tctcatccgt cagggtggca accgcctggt catgaaggtt 1980 gtgtctgtga ccaggaaacc cgaggaggat ggtgctcggc gcagagcccc accaccccca 2040 aagagggctc ccagcaccac gctgaccctg cggtccaagt ccatgacggc tgagctcgag 2100 gaacttgctt ccattcggag aagaaaaggg gagaagttgg atgagatcct ggcagttgcc 2160 gcggagccga cactgaggcc ggacattgca gatgctgact cgagggcggc cactgtcaag 2220 cagcggccca ccagccggag gatcacccct gctgagatca gctcattgtt tgagcgccag 2280 ggcctcccag gcccagagaa gctgccgggc tctctgcgga aggggattcc acggaccaaa 2340 tctgtagggg aggatgagaa gctggcatcc ctactggaag ggcgcttccc acgcagcacg 2400 tcaatgcagg acacagtgcg tgaaggtcga ggcattccac ccccgccgca gaccgccccg 2460 ccacccccac ccgcgcccta ctacttcgac tccgggccac cccccacctt ctcaccgccg 2520 ccaccaccgg gccgggccta tgacactgtg cgctccagct tcaaaccagg cctggaggct 2580 cgtctgggtg cgggggccgc cggcctgtat gatccgagca cgcctctggg cccgctgccc 2640 taccctgagc gtcagaagcg tgcgcgctcc atgatcatac tgcaggactc tgcgccagaa 2700 gtgggtgatg tcccccggcc tgcgcctgcc gccacaccgc ctgagcgccc caagcgccgg 2760 cctcggccgt caggccctga tagtccctat gccaacctgg gcgccttcag tgccagcctc 2820 ttcgctccgt cgaaaccaca gcgccgcaag agcccgctgg tgaagcagct tcaggtggag 2880 gacgctcagg agcgcgcggc cctggccgtg ggtagcccgg gaccagtggg cggaagcttt 2940 gcacgagaac cctctccgac gcaccgcggg ccccggccag gcagccttga ctacagctct 3000 ggagaaggcc taggccttac cttcggcggc cctagccctg gcccagtcaa ggagcggcgc 3060 ctggaggagc gacgccgttc cactgtgttc ctctctgtgg gtgccatcga gggcagccct 3120 cccagcgcgg atctgccatc cctacaaccc tcccgctcca ttgatgagcg cctcctgggg 3180 acaggcgcca ccactggccg cgatttgcta ctcccctccc ctgtctctgc tctgaagcca 3240 ttggtcggtg gtcccagcct tgggccctca ggctccacct tcatccaccc tctcactggc 3300 aaacccttgg atcctagctc acccttagct cttgctctgg ctgcccggga gcgggctctg 3360 gcctcgcaaa caccttcccg gtcccccaca cctgtgcaca gccccgatgc tgaccgccct 3420 ggacccctct ttgtggatgt gcaaacccga gactctgaga gaggaccgtt ggcttcccca 3480 gccttctccc ctcggagtcc agcgtggatt ccagtgcctg ctcggagaga ggcagagaag 3540 ccccctcggg aagagcggaa gtcaccagag gacaagaagt ccatgatcct cagcgtcttg 3600 gacacgtcct tgcaacggcc agctggcctt attgttgtgc atgccaccag caatgggcag 3660 gagcccagca ggctgggggc tgaagaggag cgccccggta ctccggagct ggccccagcc 3720 cccatgcagg cagcagctgt ggcagagccc atgccaagcc cccgggccca gccccctggc 3780 agcatcccag cagatcccgg gccaggtcaa ggcagctcag aggaggagcc agagctggta 3840 ttcgctgtga acctgccacc tgctcagctg tcctccagcg atgaggagac cagagaggag 3900 ctggcccgca tagggctagt gccaccccct gaagagtttg ccaatgggat cctgctgacc 3960 accccgcccc cagggccggg ccccttgccc accacggtac ccagcccggc ctcagggaag 4020 cccagcagcg agctgccccc tgcccctgag tctgcagctg actctggagt agaggaggct 4080 gacactcgaa gctccagtga cccccacctg gagaccacaa gcaccatttc cacagtgtcc 4140 agcatgtcca ccctgagctc ggagagtggg gaactcacgg acacccacac ctcctttgcc 4200 gatggacaca cttttctact cgagaagcca ccagtgcctc ccaagcccaa gctcaagtcc 4260 ccgctgggga aggggccggt gaccttcagg gacccgctgc tgaagcaatc ctcggacagt 4320 gagctcatgg cccagcagca ccatgctgcc tctactgggt tggcttctgc tgctgggccc 4380 gcccgccctc gctacctctt ccagagaagg tccaagctgt ggggggaccc cgtggagagt 4440 cgggggctcc ctgggcctga agatgacaaa ccaactgtga tcagtgagct cagctcccgt 4500 ctgcagcagc tgaataaaga cacacgctcc ttgggggagg aaccagttgg tggcctgggc 4560 agcctgctgg accctgctaa gaagtcaccc attgcagcag ctcggctctt cagcagcctc 4620 ggtgagctga gcaccatctc agcgcagcgc agcccggggg gcccgggcgg aggggcctcc 4680 tactcggtgc ggcccagcgg ccggtacccc gtggcgagac gagccccgag cccagtgaaa 4740 cccgcatcgc tggagcgggt ggaggggctg ggggcgggcg tgggaggcgc ggggcggccc 4800 ttcggcctca cgcctcccac catcctcaag tcgtccagcc tctccatccc gcacgaaccc 4860 aaggaagtgc gcttcgtggt gcgaagtgtg agtgcgcgca gccgctcccc ctcaccatct 4920 ccgctgccct cgccttctcc cggctctggc cccagtgccg gcccgcgtcg gccatttcaa 4980 cagaagcccc tgcagctctg gagcaagttc gatgtgggcg actggctgga gagcatccac 5040 ttaggcgagc accgagaccg cttcgaggac catgagatcg aaggcgcaca cctgcctgcg 5100 ctcaccaagg aagacttcgt ggagctgggc gtcacacgcg ttggccaccg catgaacatc 5160 gagcgtgcgc tcaggcagct ggatggcagc tgagcggccg c 5201 //