Dbfetch
ID L12344; SV 1; linear; mRNA; STD; MAM; 1189 BP.
XX
AC L12344;
XX
DT 19-MAY-1993 (Rel. 35, Created)
DT 17-APR-2005 (Rel. 83, Last updated, Version 6)
XX
DE Pig ficolin mRNA.
XX
KW ficolin; multimeric protein.
XX
OS Sus scrofa (pig)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus.
XX
RN [1]
RP 1-1189
RX PUBMED; 7686157.
RA Ichijo H., Hellman U., Wernstedt C., Gonez L.J., Claesson-Welsh L.,
RA Heldin C.H., Miyazono K.;
RT "Molecular cloning and characterization of ficolin, a multimeric protein
RT with fibrinogen- and collagen-like domains";
RL J Biol Chem 268(19):14505-14513(1993).
XX
DR MD5; 1b22724db673de7a52be891bc129d41b.
XX
FH Key Location/Qualifiers
FH
FT source 1..1189
FT /organism="Sus scrofa"
FT /mol_type="mRNA"
FT /tissue_type="uterus"
FT /db_xref="taxon:9823"
FT CDS 4..975
FT /codon_start=1
FT /product="ficolin"
FT /db_xref="GOA:Q29041"
FT /db_xref="InterPro:IPR002181"
FT /db_xref="InterPro:IPR008160"
FT /db_xref="InterPro:IPR014715"
FT /db_xref="InterPro:IPR014716"
FT /db_xref="InterPro:IPR020837"
FT /db_xref="InterPro:IPR036056"
FT /db_xref="UniProtKB/Swiss-Prot:Q29041"
FT /protein_id="AAA92455.1"
FT /translation="MDTRGVAAAMRPLVLLVAFLCTAAPALDTCPEVKVVGLEGSDKLS
FT ILRGCPGLPGAAGPKGEAGASGPKGGQGPPGAPGEPGPPGPKGDRGEKGEPGPKGESWE
FT TEQCLTGPRTCKELLTRGHILSGWHTIYLPDCQPLTVLCDMDTDGGGWTVFQRRSDGSV
FT DFYRDWAAYKRGFGSQLGEFWLGNDHIHALTAQGTNELRVDLVDFEGNHQFAKYRSFQV
FT ADEAEKYMLVLGAFVEGNAGDSLTSHNNSLFTTKDQDNDQYASNCAVLYQGAWWYNSCH
FT VSNLNGRYLGGSHGSFANGVNWSSGKGYNYSYKVSEMKFRAT"
FT polyA_site 1189
XX
SQ Sequence 1189 BP; 248 A; 362 C; 387 G; 189 T; 3 other;
gcgatggaca cacgcggagt ggccgcggcc atgaggcccc tggtcctgct cgttgccttc 60
ctgtgcaccg cagccccagc cctcgacacc tgtccagagg tcaaggtggt gggtctggag 120
ggctcggaca agctctccat cctccgaggc tgcccggggc tgcctggagc cgcagggccc 180
aagggagagg cgggcgccag tggaccgaag ggaggacaag gccctcccgg agcccctggg 240
gagccaggac cccccgggcc caaaggagac cgaggggaga agggcgagcc tggaccaaaa 300
ggagagtctt gggaaaccga gcagtgtctc acaggacctc ggacctgcaa ggagctgctg 360
accagggggc acattctgag cggctggcac accatctacc tgccagactg ccagcccctg 420
acggtgctgt gtgacatgga cacggatggc ggggggtgga ccgttttcca gcgcaggagc 480
gacgggtcgg tggacttcta ccgggactgg gccgcgtaca agcggggctt cggcagtcag 540
ctgggagagt tctggctggg gaacgaccac atccacgccc tgacggccca gggaaccaat 600
gagctccggg tggacctcgt ggacttcgag ggcaaccacc agtttgccaa gtacaggtcc 660
ttccaggtgg cagacgaggc agagaagtac atgctggtcc tgggagcctt tgtagagggc 720
aatgcaggtg attccctgac gtcccacaac aacagcctgt tcaccaccaa agaccaggac 780
aacgaccagt acgcctcaaa ttgtgcagtg ctgtaccagg gagcctggtg gtacaacagc 840
tgtcacgtgt ccaacctgaa cggccgctac ctcgggggct cgcacgggag ctttgcaaac 900
ggcgtcaact ggagttcggg gaaagggtac aactacagct acaaggtgtc ggagatgaag 960
tttcgggcca cctagggcgg gacagtgctt ccagaaccct ccctggggag gggccacggg 1020
gctcccgctc actatccgcc cgggtgtgaa gggccacatc ccaaccctgg ggggcggcca 1080
tgccctctgc acctccacca gcttccaatc ttctgtccct ctcaggagga caagagtgac 1140
cgttactcca gcaacatgta ttctcaataa agacacttgc ttaccmrna 1189
//
ID L12345; SV 1; linear; mRNA; STD; MAM; 1042 BP.
XX
AC L12345;
XX
DT 09-APR-1993 (Rel. 35, Created)
DT 17-APR-2005 (Rel. 83, Last updated, Version 8)
XX
DE Sus scrofa ficolin mRNA, complete cds.
XX
KW ficolin; multimeric protein.
XX
OS Sus scrofa (pig)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus.
XX
RN [1]
RP 1-1042
RX PUBMED; 7686157.
RA Ichijo H., Hellman U., Wernstedt C., Gonez L.J., Claesson-Welsh L.,
RA Heldin C.H., Miyazono K.;
RT "Molecular cloning and characterization of ficolin, a multimeric protein
RT with fibrinogen- and collagen-like domains";
RL J Biol Chem 268(19):14505-14513(1993).
XX
DR MD5; 21a87a265ce545ca13da07296f7de75e.
XX
FH Key Location/Qualifiers
FH
FT source 1..1042
FT /organism="Sus scrofa"
FT /mol_type="mRNA"
FT /db_xref="taxon:9823"
FT CDS 13..993
FT /codon_start=1
FT /product="ficolin"
FT /db_xref="GOA:Q29042"
FT /db_xref="InterPro:IPR002181"
FT /db_xref="InterPro:IPR008160"
FT /db_xref="InterPro:IPR014715"
FT /db_xref="InterPro:IPR014716"
FT /db_xref="InterPro:IPR020837"
FT /db_xref="InterPro:IPR036056"
FT /db_xref="UniProtKB/Swiss-Prot:Q29042"
FT /protein_id="AAC69641.1"
FT /translation="MELSRVAVALGPTGQLLLFLSFQTLAAQAADTCPEVKVVGLEGSD
FT KLSILRGCPGLPGAAGPKGEAGANGPKGERGSPGVVGKAGPAGPKGDRGEKGARGEKGE
FT PGQLQSCATGPRTCKELLTRGHFLSGWHTIYLPDCQPLTVLCDMDTDGGGWTVFQRRSD
FT GSVDFYRDWAAYKRGFGSQLGEFWLGNDHIHALTAQGTSELRVDLVDFEGNHQFAKYRS
FT FQVAGEAEKYKLVLGGFLEGNAGDSLSSHRDQFFSTKDQDNDNHSGNCAEQYHGAWWYN
FT ACHSSNLNGRYLRGLHTSYANGVNWRSGRGYNYSYQVSEMKVRLT"
XX
SQ Sequence 1042 BP; 209 A; 319 C; 360 G; 154 T; 0 other;
aagcatgagg acatggagct gagcagagtt gccgtggccc tggggcccac tggccagctc 60
ctcctgttcc tgagcttcca gaccctggct gcccaggctg ccgacacctg tccagaggtc 120
aaggtggtgg gtctggaggg ctcagacaag ctctccatcc tccgaggctg cccggggctg 180
cctggagccg cagggcctaa gggagaggcg ggcgccaatg gaccgaaggg agagcgaggc 240
tcccccggcg tcgtcgggaa ggcaggaccg gctgggccca aaggagaccg aggggagaag 300
ggcgcgcgtg gagagaaagg agagcctggg cagctccagt catgtgccac aggacctcgg 360
acctgcaagg agctgctgac cagggggcac tttctgagcg gctggcacac catctacctg 420
ccggactgcc agcccctgac ggtgctgtgt gacatggaca cggatggcgg ggggtggacc 480
gttttccagc gcaggagcga cgggtcggtg gacttctacc gggactgggc cgcgtacaag 540
cggggcttcg gcagtcagct gggagagttc tggctgggga acgaccacat ccacgccctg 600
acggcccagg gaaccagtga gctccgggtg gacctcgtgg acttcgaggg caaccaccag 660
tttgccaagt acaggtcctt ccaggtggca ggcgaggcag agaagtacaa gctggtcctg 720
ggaggcttcc tggagggcaa tgcaggtgac tccctgtcat cccacagaga ccagttcttc 780
tccaccaaag accaggacaa cgacaaccat tcgggaaact gcgcggagca gtaccacggc 840
gcctggtggt acaacgcctg ccactcctcc aacctgaacg gccgctacct ccggggactg 900
cacaccagct atgccaacgg cgtcaactgg aggtcgggga gagggtacaa ctacagctac 960
caggtgtcgg agatgaaagt gcgtctcacg tagggggggc ccggcccggc tcctccccat 1020
ccaccggccg gcagcctcca ca 1042
//