Dbfetch
LOCUS XM_012198825 1086 bp mRNA linear INV 02-APR-2015 DEFINITION PREDICTED: Atta cephalotes out at first protein (LOC105617260), partial mRNA. ACCESSION XM_012198825 VERSION XM_012198825.1 DBLINK BioProject: PRJNA279976 KEYWORDS RefSeq; corrected model. SOURCE Atta cephalotes ORGANISM Atta cephalotes Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012130076.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta cephalotes Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## internal stop codons :: corrected 1 genomic stop codon ##RefSeq-Attributes-END## COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..1086 /organism="Atta cephalotes" /mol_type="mRNA" /db_xref="taxon:12957" /chromosome="Unknown" /sex="male" gene <1..1086 /gene="LOC105617260" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins" /db_xref="GeneID:105617260" CDS <1..1086 /gene="LOC105617260" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon" /codon_start=1 /transl_except=(pos:124..126,aa:OTHER) /product="LOW QUALITY PROTEIN: out at first protein" /protein_id="XP_012054215.1" /db_xref="GeneID:105617260" /translation="KNDMTPGGCSDSHLGTPQVSCHSCVTYDKQQGWSDTWVTLEXIS EHELAWIFLHRGRPYSLSSSISSMTLLLSDETSAIVNNATMRRFNEFLAICVVLQCFY GVCTTHLLINVKNQGGDILLETISSNVTEDLITLEFQRSDGTLVTQLIDFKNEVQVIK ALVLGEEERGQNQYQVMCFVNHFYKVDFISSDAMSKLRQKNPGTVRVAEEDRGHVNYT MDLFLDVSQSKEISKHVTILCAEAAGSTYTRNDDIKQWIQRPGSSEELLMAAVYNFTN VPQSGMNDTRSLLVSKCADTSNLWAPCTCSLELCIGWYPCGLKFCKGKSDGKKVASTY RCGIKTCKKCFIFSYYSKMKQNCLWDE" ORIGIN 1 aaaaatgata tgacacccgg agggtgttca gattcccatc taggtactcc ccaggtgtca 61 tgtcattctt gtgtaacata tgataaacaa caaggatgga gtgatacctg ggtgacactc 121 gaatagatat ccgaacatga gctagcatgg atattcttac atcgtggacg tccatattcc 181 ctctccagta gtataagttc tatgacttta ctactctcgg acgagacgag cgcgatagtt 241 aacaatgcga caatgaggag gttcaacgag tttctcgcga tctgcgtcgt gttgcagtgc 301 ttttatggtg tatgcaccac acatttgctc ataaacgtca aaaatcaggg tggtgatatt 361 cttctagaaa caatctcgtc taatgttaca gaagatttga ttactctcga attccagcgt 421 tctgatggca cactagtcac gcaacttatt gatttcaaaa atgaagttca agttataaaa 481 gctttggtac tcggtgaaga ggaacgtgga caaaatcagt atcaagtcat gtgctttgta 541 aatcattttt ataaagtaga ttttatatca tctgatgcaa tgtccaaact acgtcaaaag 601 aatccaggta ccgtacgagt agctgaggag gacagaggtc atgtcaatta cacaatggac 661 ttgtttctgg acgtttctca atccaaggaa atctcaaagc atgttaccat actttgtgca 721 gaagcagctg gatcaactta taccaggaat gatgatataa agcagtggat tcaaagacca 781 ggttcctcgg aagagttatt aatggcagct gtatataatt ttacaaatgt gccgcaatca 841 ggtatgaacg atacaagatc attattggtc tctaaatgtg ctgacacatc aaatctctgg 901 gcaccttgta cgtgttccct cgaattgtgc attggttggt atccgtgtgg tttaaaattt 961 tgcaaaggaa agtctgatgg caaaaaagta gcaagcactt atcgatgtgg cataaaaaca 1021 tgtaagaaat gttttatatt ctcatattat tctaaaatga aacagaactg tctatgggat 1081 gaatga //