Dbfetch
LOCUS NM_001023416 2222 bp mRNA linear PLN 16-AUG-2024 DEFINITION Schizosaccharomyces pombe amino-acid permease (SPOM_SPCPB1C11.02), mRNA. ACCESSION NM_001023416 VERSION NM_001023416.3 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 2222) AUTHORS Schafer,B., Hansen,M. and Lang,B.F. TITLE Transcription and RNA-processing in fission yeast mitochondria JOURNAL RNA 11 (5), 785-795 (2005) PUBMED 15811919 REFERENCE 2 (bases 1 to 2222) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 3 AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 4 (bases 1 to 2222) AUTHORS Trinkl,H., Lang,B.F. and Wolf,K. TITLE Nucleotide sequence of the gene encoding the small ribosomal RNA in the mitochondrial genome of the fission yeast Schizosaccharomyces pombe JOURNAL Nucleic Acids Res 17 (16), 6730 (1989) PUBMED 2780299 REFERENCE 5 (bases 1 to 2222) AUTHORS Lang,B.F., Cedergren,R. and Gray,M.W. TITLE The mitochondrial genome of the fission yeast, Schizosaccharomyces pombe. Sequence of the large-subunit ribosomal RNA gene, comparison of potential secondary structure in fungal mitochondrial large-subunit rRNAs and evolutionary considerations JOURNAL Eur J Biochem 169 (3), 527-537 (1987) PUBMED 2446871 REFERENCE 6 (bases 1 to 2222) AUTHORS Lang,B.F., Ahne,F. and Bonen,L. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene JOURNAL J Mol Biol 184 (3), 353-366 (1985) PUBMED 4046021 REFERENCE 7 (bases 1 to 2222) AUTHORS Lang,B.F. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans JOURNAL EMBO J 3 (9), 2129-2136 (1984) PUBMED 6092057 REFERENCE 8 (bases 1 to 2222) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 9 AUTHORS Wood,V. and Rutherford,K. CONSRTM PomBase TITLE Direct Submission JOURNAL Submitted (13-MAR-2024) University of Cambridge, PomBase, Hopkins building, Tennis Court Rd, Cambridge, United Kingdom REFERENCE 10 AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (03-JUL-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003421). On Jun 21, 2024 this sequence version replaced NM_001023416.2. FEATURES Location/Qualifiers source 1..2222 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="III" gene 1..2222 /locus_tag="SPOM_SPCPB1C11.02" /db_xref="GeneID:2539031" /db_xref="PomBase:SPCPB1C11.02" CDS 299..1816 /locus_tag="SPOM_SPCPB1C11.02" /codon_start=1 /product="amino-acid permease" /protein_id="NP_588425.1" /db_xref="GeneID:2539031" /db_xref="PomBase:SPCPB1C11.02" /translation="MDASVSLLPEGESLHRSLSASQIQMLAFGGIIGTGLFLGIGSSL AESGPASLLISFSVLGVSVYCTMLALGEMSVYMPVAGSFCTYVGRYVDEALSFSLTWN YWLNDTIALASHVLATRLVVDFWLIPTEGDPVSASLSLPPWKEAVRIITPITSLSANI ILNMLPVGGFGEIEYWLSSIKVFTVAAFIVNGILCNLGVNNEKKFIGFRYWKDPGAFN NGIIGVISSFVNAAFAYAGTESIALTAGEAKSPITTLPKAIRFTAHRVLLLYIISVLV VGINLPYNTPGLDGDSVRMSPFTFVFKKFGVPGAASIMNLVILSSALSAGNHSLYAGT RLLYSLAKSGHAPKVFSKCNKHGIPWLSVLATSATAILCLMSSQAGKTWGFLLNVIAV SNQISWIFIAVSSLRFRKALRVQGKTHRLYFPNWTYPVGPYIIILLNGVFLFLQGYKS LYPFRLSLFVSYYMEIPIVLGLYLIWKIYKKTKLVSSSEADLETDWKSLEDTDSA" ORIGIN 1 ggtttccagc acctttgttc gcagaattgt ttaaaataaa gagtgtatga tgaaaaagaa 61 tctgtggtat tttgaattca actactccta ctcttctcta cttatttcca gagtttgagc 121 acgtcatcag caggcttagc taagcttaat aaaaccatct tttggctttg aattcttagt 181 gtgaaccatt tactttgctt attatatatt aatcgtcaat atttttttgg cccaacttcc 241 atatccctct ttttgcaatc gctttggata gttttctttt gtctatacgt atttcataat 301 ggatgcaagt gtaagtctcc ttccagaagg agaatctctt catcgctctt tatcggccag 361 ccagattcaa atgttagcat ttgggggcat tattggaact ggtctttttt taggaattgg 421 ctctagtttg gcggaatcgg gtcctgcttc cctactgatt tcattctctg tacttggtgt 481 aagcgtttat tgtaccatgc tagcgcttgg cgaaatgtcc gtctatatgc cagtggctgg 541 ctctttttgt acatatgtag gccgatatgt agatgaggcc ctgagctttt cccttacttg 601 gaattactgg ctgaatgata cgattgcttt agcaagccat gttttagcaa ctcgattggt 661 agttgatttt tggttaatac ctactgaggg tgatcctgta agtgcatctc tctccttgcc 721 tccttggaaa gaggccgtcc gaatcattac gccgatcact tcgttgtctg caaatatcat 781 tcttaatatg cttcccgttg gcggttttgg cgagatcgag tactggcttt ccagcatcaa 841 ggtattcacg gtggctgcat ttattgttaa tggcatttta tgcaacctcg gagttaacaa 901 tgagaaaaaa ttcattggat ttcgctattg gaaagatcca ggagccttca ataatggtat 961 tattggtgtc ataagtagtt tcgtcaatgc tgcttttgcc tatgctggca ctgagtcaat 1021 cgctctcacc gctggtgaag ccaagtctcc aattaccaca ttacccaaag caattcgctt 1081 tacagcacat cgtgttttgt tgctctatat aattagtgtc ttggttgttg gtattaatct 1141 gccttataat actcccggtc tcgacggcga ctctgtacgc atgtccccgt tcacttttgt 1201 tttcaaaaaa ttcggcgttc ccggtgcggc gagtataatg aatttggtta tattgtcatc 1261 agcattatca gcaggaaacc actctttata cgctggaact cgtctgctgt attccttggc 1321 caaatctggt catgcgccta aagtgttttc caaatgtaac aagcatggaa ttccttggct 1381 gtcagtgctt gctaccagtg caactgcaat tttgtgtctc atgtcttcac aagctggaaa 1441 gacatggggc tttttactaa acgtcattgc cgtctccaac cagatttcat ggatattcat 1501 tgccgtttca agtttacgat ttcgcaaagc tttacgagtt cagggaaaaa cccatagact 1561 gtattttccc aactggacct atcccgtagg cccttatatt attatcttat taaatggcgt 1621 atttcttttc ctacaaggct acaagagtct ctatcctttt cgtctttcgc ttttcgttag 1681 ttattacatg gagataccca ttgtgcttgg attatatcta atttggaaga tttataagaa 1741 gaccaaattg gtcagttcaa gtgaagctga tttggaaaca gattggaaat ccttagagga 1801 cactgactct gcatgagttt ttggcatttt tctatctcag tctttttttt ttttttttgt 1861 cttttatttt tcttaccgat gtgtctataa ataaacgcgc attctgatac cggaagtatt 1921 caactccctt ccattataat ttgatgattc ctttatgttc tttcgaaatt tttattttgc 1981 tatattttct tcatgtttac ttacttacag cagctggctc aatgaatgag tcgaagctat 2041 agcgctttta gtcactcatt atgccttgta ctctaatcct aattatcatt gatacccccc 2101 tttataacgc aaatcttatg tatgaatgaa ttgcaatgat atctgattca aaattaatgt 2161 gctatctcct tatatgcatt gaaactcaac ctgtttccct gctattgcac tttaaaattt 2221 tc //