Dbfetch
LOCUS NM_001023182 6692 bp mRNA linear PLN 16-AUG-2024 DEFINITION Schizosaccharomyces pombe siderophore-Fe(3+) transporter Str2 (str2), mRNA. ACCESSION NM_001023182 VERSION NM_001023182.3 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 6692) AUTHORS Schafer,B., Hansen,M. and Lang,B.F. TITLE Transcription and RNA-processing in fission yeast mitochondria JOURNAL RNA 11 (5), 785-795 (2005) PUBMED 15811919 REFERENCE 2 (bases 1 to 6692) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 3 AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 4 (bases 1 to 6692) AUTHORS Trinkl,H., Lang,B.F. and Wolf,K. TITLE Nucleotide sequence of the gene encoding the small ribosomal RNA in the mitochondrial genome of the fission yeast Schizosaccharomyces pombe JOURNAL Nucleic Acids Res 17 (16), 6730 (1989) PUBMED 2780299 REFERENCE 5 (bases 1 to 6692) AUTHORS Lang,B.F., Cedergren,R. and Gray,M.W. TITLE The mitochondrial genome of the fission yeast, Schizosaccharomyces pombe. Sequence of the large-subunit ribosomal RNA gene, comparison of potential secondary structure in fungal mitochondrial large-subunit rRNAs and evolutionary considerations JOURNAL Eur J Biochem 169 (3), 527-537 (1987) PUBMED 2446871 REFERENCE 6 (bases 1 to 6692) AUTHORS Lang,B.F., Ahne,F. and Bonen,L. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene JOURNAL J Mol Biol 184 (3), 353-366 (1985) PUBMED 4046021 REFERENCE 7 (bases 1 to 6692) AUTHORS Lang,B.F. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans JOURNAL EMBO J 3 (9), 2129-2136 (1984) PUBMED 6092057 REFERENCE 8 (bases 1 to 6692) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 9 AUTHORS Wood,V. and Rutherford,K. CONSRTM PomBase TITLE Direct Submission JOURNAL Submitted (13-MAR-2024) University of Cambridge, PomBase, Hopkins building, Tennis Court Rd, Cambridge, United Kingdom REFERENCE 10 AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (03-JUL-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003421). On Jun 21, 2024 this sequence version replaced NM_001023182.2. FEATURES Location/Qualifiers source 1..6692 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="III" gene 1..6692 /gene="str2" /locus_tag="SPOM_SPCC61.01C" /gene_synonym="SPCC622.20c" /db_xref="GeneID:2539559" /db_xref="PomBase:SPCC61.01c" CDS 22..1815 /gene="str2" /locus_tag="SPOM_SPCC61.01C" /gene_synonym="SPCC622.20c" /codon_start=1 /product="siderophore-Fe(3+) transporter Str2" /protein_id="NP_588192.1" /db_xref="GeneID:2539559" /db_xref="PomBase:SPCC61.01c" /translation="MTENYGSMEHRKKSFRNNENLEQQFHPLREELDNAGPINDRTSE LSLEGVSKAEAIASTWSKRSIIVAYLGLYLLSFASSLEQQTTYSLQRYATSNFSAHSN LATINLVGNILLAVVRAPMVKAADVFGRSESLSLALGMTVLGYLSLAFSRNIQMFTVA YILYICGQTGLGLLSQLIIADTSSLLNRGILSAIPELPYLATVWIGPVLAQAFHPEKN YGWRLGYGIWAFILPTVSLPLLASLFLNQRKAKAAGLYREHHNLINHSTPEKLRLFYL FWQELDGLGIVLFVSGFTLLLLPFSHSSQVVSPDSTILTLFTITLSIALLVTLCFYDV KYARYPVFALKSLKDRTILGSCVLIFTYFMSYYIFSNFLTSFLQVSYGLSIDMSSLTL NVFVFSMTTTAILSGFLMKRFGRFKMLLMISVPMYVLGILGIILFGINDNHYTRPLVL VLILAGMGGGLLTLSAQIAVQSVSSHAKLGMNLTLYLTFSSVGGAFGSAIAGGVWSKR LSSRLLHDLKDHLPVPEIESIFRDLRTALSYPQGTQIRNIINVAYTATEKDLFHISLV ASLFMFAGLVIIRDVPLSTENHDTAVETPSE" ORIGIN 1 gccatttacc atacactctg gatgactgag aattatggaa gcatggagca tcgtaaaaag 61 agttttcgta ataacgaaaa tttagaacag caatttcatc cccttagaga agagcttgat 121 aatgctggac ccataaatga tcgtacttca gaattgtcac tagaaggtgt ttccaaagct 181 gaggcaattg cttcaacatg gtctaaaaga tcgattattg ttgcttacct tggtctctat 241 ttgttgtcat ttgcatcttc attagagcag caaactacgt attctttgca aagatacgca 301 accagcaact tttccgccca ttcaaacttg gctacaatca atttggtggg caatattctt 361 ttagcagttg ttcgagcacc aatggtaaag gctgccgatg tctttggacg ttcggagagt 421 cttagtttag cattaggaat gacagtgttg ggatatcttt cattggcatt ttctcgaaat 481 attcaaatgt ttaccgtagc atatatcctc tatatatgcg gccaaactgg gctaggtctg 541 ttatctcaat taattattgc agacacatct tcgctactca atcgggggat tctctctgct 601 atcccagaac ttccctatct tgcaactgtt tggattggac cagtgcttgc tcaagccttt 661 catcctgaga aaaattatgg gtggagattg ggttatggta tatgggcgtt cattttacca 721 acagtttcat tacctctctt ggcttcgctt ttcctaaacc aaagaaaagc caaggctgca 781 ggtttatata gagaacatca taacttgatc aatcattcca ctcctgaaaa acttagacta 841 ttttatttgt tttggcagga attggatggt cttggaatag tgttgtttgt gtctggcttt 901 acgcttttgt tgctgccttt ttcccattcg agtcaggtag tttcaccaga ctcaacaatt 961 ttaactctct ttactataac tctctccatt gctttgttag taaccctatg cttctacgac 1021 gtcaaatatg cacgctatcc cgttttcgcc ttaaaatctt tgaaagaccg taccatcctt 1081 ggttcatgcg ttttaatttt cacatatttc atgtcttatt atattttctc aaatttttta 1141 acttctttcc ttcaagtctc ttatggatta tcaattgaca tgagtagcct tacccttaat 1201 gtttttgtat tttcaatgac tacgacggct atcctgtcag gttttctcat gaagcggttt 1261 ggtcgcttca agatgttgct tatgatttct gttcctatgt acgtattggg gattttgggt 1321 atcatcttat ttggtattaa cgataaccac tatacccgtc ccctagtttt agtgcttata 1381 cttgctggta tgggaggtgg gttactgacg ttaagtgcgc aaattgctgt tcagtcagta 1441 tcgtcacatg ctaaattagg tatgaatctc acgttgtatt taacgttttc ttctgttggt 1501 ggtgcctttg gatctgctat tgcaggaggc gtatggagta agaggctctc aagtcgtttg 1561 ttacatgacc ttaaagatca tcttcctgtc ccagaaattg aatcaatatt ccgggaccta 1621 cgaactgctc tgtcataccc ccaagggact caaattcgta atatcattaa tgttgcttat 1681 actgccaccg agaaggatct tttccatatc tcacttgttg cctctttatt tatgtttgcc 1741 ggacttgtta taattagaga tgtccccctt tccactgaaa atcatgatac agccgtcgaa 1801 actccctcag aataatttac aattaatttt tttagaatag tgaacctaag tatgctatcc 1861 aaaaatcctt cttatcttta taaatccccg tttttatgct ttcatttttc aattgtcttt 1921 cttaaacgta caaaaatttc caatttttgg gtcattggag tacgattacg actttttttt 1981 atatcattag tacaagggat tttcaagggt ttgtattaat aaatttaaaa ttattcaatt 2041 ctaaatgttt tataaataag tgttttattg acaagttttc ttttgagaag gtgaatcgtc 2101 ttctgccggt cgtttttcgt ttttcttgtt agtagcatac aattgatcaa ttgcctctcc 2161 aacaagatga cgcttggctt gccaaatgtt gcgatccaag tagggatgat caaagtcttc 2221 aagattatcg ggaggatgaa accaataatt aaatgcaata tgtacatcgc tacctccaga 2281 actagcgctt gaagaggtga cttcatgaaa ccaacttgct ggtaaataaa gcatgtcgcc 2341 aggttctaaa tccaccacta gaggaactgt ccccgcaaga gcagaaagct catctttatc 2401 aacatcaaca ttcttagcat catcaaatcc catgaattta tgcaatccat taacactcac 2461 cttggtaaaa tgatcaggta attcgggttt tgtatcctgc aaactagttg cttcaatatc 2521 atttccttca ttcaataaaa tatcactttc cggatcaccg ccaactgatc cgtctaacaa 2581 gctagcagca tctccttctt ctaaatcatt ccaatcttct tcaggtccgc caatttgcat 2641 ttgaagaact ctgtccatct cattttcata ttcagcttcc aatagttcga tactttcttg 2701 agggaccgct agttctttca aagaaccaat ttttttttct aaaaattgtg tttttgcaat 2761 tgcagcatca agctcagtga gtccatcgct gcgctgaggg caatcttcac cttcataaga 2821 aattaaccca ttagggtgga tttttgaaat ttttccagag agtttaagtt gatttgcatg 2881 atctggtgaa ataattacga atctcttgta tccggaaatg accgcatata tgttatcgtg 2941 aaaatcatgg tgtaaaccgg aagaagtgcc gttctcactt tttccaatcc aaagattgca 3001 ttgctggggg accaaattgc ccattaatgc cggggttatt gaaaagtcgg taagcaaacc 3061 atcagtagga tgaggacata aacttttaac aagaagagaa acctcatcat ctccatctaa 3121 aacctcgttg gattcatcgt actgtgtagt caaataaagt cgttcaccat tttttagttt 3181 ttgaaaaaat tctttgatgg acatttcatt tcgactcata ccttgtccaa aggtcccaga 3241 aacaggatcg atcggctcaa ccttgcatac gatatcacca attttagaga gcaagtaatc 3301 ctgttgctgc cataggtaac ccttccagtc agactctggt aaggaggatt taatgatgac 3361 gggagtcctg gtagcaatga acttatcata aaaatcttta ggtgttaaat cgttcaagtt 3421 ctggagcact ggaaccttgt ctccgtgttt aggcgagtat cctgctttcg ttagctcaga 3481 gcaatgagtc ctaatttctc ttacctttat aggttgataa ttcactcata ataagttgct 3541 atcgctctgc taacgaccat ttgagaaatt tgccttttat atggccgctc aaaacggaaa 3601 ttgcttttct attgaaaatt gatgatcaca aatatttatt ttgggatagt attaatgcac 3661 taaaagaaag ttatgtgcat acaagaaaat ttagcacaga cttgaacttg aattggatac 3721 aagttgtgaa tgaaataacg gcgtctacaa catttccaaa tgtaacgaaa agcgataaca 3781 aagctaaatc gctaaacata tagctaacta catttcatat atatactggg caaccaacaa 3841 accacagtta tatagttatt atacaccaaa ttacatatac aagaatcaga tctgcttcag 3901 cgaaatgata tcaaatgcat acattatact acactctgaa gtcaatatgc tttaacaatc 3961 aaaaaaatat gttcagtaac tacttgccaa ttttataaaa attttagata catatgtgca 4021 gtgcactgct cttctactta gcgcatgcat aaccaactcg atggaatctt acaagggccg 4081 gaaatgccaa agtttcaata aataagaagt cccgcaagtg ccaacacaaa gatagattta 4141 cctatttacc taaggttatg aatctaaaac ttcatcaagt gaggacggtc accgttagac 4201 aaagcgaagg aagcagcgag gtattccttc atattaggga tagccttgat agcagggaga 4261 agcttagcat caacggcctt ttggtcagca atacgctcag cgggaagagc gttcttggga 4321 gcgttctcgg cgaagaaagc ttcatccttc ttgacgggtc cgctacgctt ttgcttggca 4381 aagtaagcct tggtgaactt ctcaacagag acaccggaga catcgatctt gggggcagag 4441 gtagcaatca cataacggtg gttgacacga cggataggga caccgttgac cttgtaaggg 4501 ccagtaacga caagagtgtc ctccaattga ctgaggacaa caacacgctt accacggaag 4561 cgtccagcca acaaaatgca aacagttccg ggtgctaaag aagcacggag cttggtaggg 4621 cgtacagcct tacgagcctt cttggggacg ttttcacggt aggcaggata gtatttagcg 4681 gcggcctcgc cggcaggcaa caccatacgt tctccgccgt tcttagctcc gttgaccttg 4741 actgtagaca tctttttatg cttggagttt ttgggtggtg tagagattct tctaacataa 4801 aatgagaaat ttagtgactc ccaaaaagaa cagtcacatg ttgtgttagc actttagggt 4861 agggcaagga cgaaagttag agcagtccag cactgaacag cgttgctcat gggaaatggt 4921 aaaatgataa aattataagt aatgtatcgt tatatgatta aaaattccgt attccagtgt 4981 tcgaagaata tggatataat tgaaacaaaa agatgccttt aaagtagtca attgagccga 5041 agttgctttc gataataatt cctgaatcaa atgataaata ctgcaaaata ggcagtgtaa 5101 aaatgaagaa actgagaacg tcatttgtgc caaaacataa tatagtggat aaaggcaata 5161 ataaaatgct gggaatgcaa ttcatgaatc aaattttagg atttttaaat cgtacccttg 5221 atttatcttt cattaaattg catgttacat gaatttattc atccaagctc ttaacttctg 5281 catttccaag cttttgcttt tttctgagta acaaagtagt ttgatcgcca tccttgcttt 5341 ttttctttct atccttcttt gcttcttttt tttcaaattt attcaaatgc tccttccggg 5401 atgctgctcc taaattggac aaacgcgctg attctttcat taattcgaca tcatctgatg 5461 atttacctac cataaatcgt aaaagttcaa cctctttctt ccattgctct ggagatttgg 5521 caggagtctc caaaactaat gggatcccat cccaccgtga atcattcatt attagtcgaa 5581 aaggctctaa tcctaaaaat cctaaaccaa tgttttcatg caaatcacga ttgctaccaa 5641 gaggagcctt ggaatcattt aagtgccatc cagacacgta tttggctcca accttttcgt 5701 caaactcgtc aataactttt ttgtagctct cttcggtgcg aatatcgtag cctgcagcaa 5761 atgtatgaca ggtgtccaag caaaccctcc aacggtctaa gttcttaatc tttgacttta 5821 aagctgcaaa gtcatcaaag gtccctccca gacaatttcc ctgaccagcc atgttctctg 5881 taactataat aacgcttttg gtctcttcgt gcgcacgatt gatgcattct gctaagttgt 5941 tgattccttc ttcctttgta cacgaagcag tactaccagg actacaaaga tcaaaagagt 6001 tagtacgttt tgggtaaaat ataagtaaat agagcacact atgaatgaca tactgaaaat 6061 tgtacaaacc aacaccaagt ctttcacagc gcttcaggtc gtcgacaaag caattgaatg 6121 cctgttctct tttctgctca tcggcattgg ccatgttaat cagatagctt ccatggacaa 6181 gaacctgttt gctcgcatcg aatttcattt cggatgctgt ctccaagaat ttttgagcaa 6241 catcctccga taaatccgga gaggtccatt ttctttgtga ttttacaaaa aaagcacaac 6301 tattggcact gatataaaat ttcgttagca gataagcttt gtttattgca cacatcagtc 6361 acctccttca aaattatgtg agaaaagttt atagcataag ctatggtttt tgaaaacgac 6421 aaatagacgt accatcagca aatcctctaa caatttgcta ataactacta gtgaatcagt 6481 ttgcaagtcg caataatgca cgattacgcc aagcctaacg tacactttct caacatattc 6541 aagctgattg ctttaagaat atacttactt gatatttttc atattgatta gagcgttaaa 6601 aacgccccca gctgcagaaa tatgcgcgcc tactaatttt catgcaacct ccatagcttc 6661 ctcagaatcc tcttgtttaa ggtccttttc ag //