Dbfetch
LOCUS NM_001022981 1789 bp mRNA linear PLN 16-AUG-2024 DEFINITION Schizosaccharomyces pombe uncharacterized protein (SPOM_SPCC16A11.03C), mRNA. ACCESSION NM_001022981 VERSION NM_001022981.3 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 1789) AUTHORS Schafer,B., Hansen,M. and Lang,B.F. TITLE Transcription and RNA-processing in fission yeast mitochondria JOURNAL RNA 11 (5), 785-795 (2005) PUBMED 15811919 REFERENCE 2 (bases 1 to 1789) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 3 AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 4 (bases 1 to 1789) AUTHORS Trinkl,H., Lang,B.F. and Wolf,K. TITLE Nucleotide sequence of the gene encoding the small ribosomal RNA in the mitochondrial genome of the fission yeast Schizosaccharomyces pombe JOURNAL Nucleic Acids Res 17 (16), 6730 (1989) PUBMED 2780299 REFERENCE 5 (bases 1 to 1789) AUTHORS Lang,B.F., Cedergren,R. and Gray,M.W. TITLE The mitochondrial genome of the fission yeast, Schizosaccharomyces pombe. Sequence of the large-subunit ribosomal RNA gene, comparison of potential secondary structure in fungal mitochondrial large-subunit rRNAs and evolutionary considerations JOURNAL Eur J Biochem 169 (3), 527-537 (1987) PUBMED 2446871 REFERENCE 6 (bases 1 to 1789) AUTHORS Lang,B.F., Ahne,F. and Bonen,L. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene JOURNAL J Mol Biol 184 (3), 353-366 (1985) PUBMED 4046021 REFERENCE 7 (bases 1 to 1789) AUTHORS Lang,B.F. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans JOURNAL EMBO J 3 (9), 2129-2136 (1984) PUBMED 6092057 REFERENCE 8 (bases 1 to 1789) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 9 AUTHORS Wood,V. and Rutherford,K. CONSRTM PomBase TITLE Direct Submission JOURNAL Submitted (13-MAR-2024) University of Cambridge, PomBase, Hopkins building, Tennis Court Rd, Cambridge, United Kingdom REFERENCE 10 AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (03-JUL-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003421). On Jun 21, 2024 this sequence version replaced NM_001022981.2. FEATURES Location/Qualifiers source 1..1789 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="III" gene 1..1789 /locus_tag="SPOM_SPCC16A11.03C" /db_xref="GeneID:2539233" /db_xref="PomBase:SPCC16A11.03c" CDS 14..1414 /locus_tag="SPOM_SPCC16A11.03C" /note="DUF2009 family protein, conserved in yeast and apicomplexa" /codon_start=1 /product="uncharacterized protein" /protein_id="NP_587990.1" /db_xref="GeneID:2539233" /db_xref="PomBase:SPCC16A11.03c" /translation="MSIAQLFNQSWVEKSKYVPVRLSDEERKILSLLEAALEVIDYTG HVDIISYTTRTKLMVKYLNEMCSIVMGLVTAMDIKAGRDLLIGRDHKSNARFFQTVFE IGRRYKIMNPEKMRATYGAVMYMCQDSLIPDVRSQLGFDFVSPIKTVYNVLEKHKLLG LLEEKQLLNNLLKQSDPQSNANAKAELLKEREEASETLLKKYNPGKDEKLQKVLTDCF ASLADHEAFLLANRNPVEKMRAYLHKFFNPHDTKNGSLKIGYMTGAKLNHDHKTQFFY VDQSLVFWSCMMDQMFLLWLESDASLLDKHSRYFISDTGQGLNRVQLCPLVRSTVTRI LSSVQKQQEIPWMGSSVIHLGDRDVPNALMFIDKYRQVPHILAPLVKVLQQLEFLRDP YLVQYIENEYGSVNGLQKTILLDFFRHGFNGQGSDGGSCIDGRLTSAWNWTNEITKKK YYRILLMSGFLNFEGI" ORIGIN 1 gaccaacacc aaaatgtcaa tagctcaatt gtttaaccag agttgggtag aaaaatcaaa 61 atatgtccct gtaagattaa gtgatgagga acgaaaaatt ttgagcttgt tagaagcagc 121 acttgaagta attgattata cgggccatgt cgacattatc tcttatacca ccaggaccaa 181 actgatggta aaatacttga acgaaatgtg cagtatagtg atgggacttg tcactgcaat 241 ggatattaaa gcaggacgtg atttactaat tggaagagac cacaaatcaa atgctaggtt 301 ttttcaaacc gtttttgaaa ttggaaggag atacaaaatt atgaatcccg agaaaatgcg 361 tgcaacatat ggtgctgtta tgtatatgtg ccaagacagt ttaattccag atgttcgtag 421 tcaacttggc tttgatttcg tatcacccat aaaaactgta tacaatgttt tggaaaagca 481 caaacttttg ggtctgcttg aagagaaaca gcttttaaac aatcttttaa aacagagcga 541 tcctcaaagt aatgccaatg ccaaagcaga actgttaaaa gaacgggaag aagcttcaga 601 aactcttttg aaaaagtata atccaggaaa agatgaaaaa ttacagaaag tgcttacgga 661 ctgcttcgct tctttagctg atcatgaagc tttcctttta gctaatcgaa atcctgtgga 721 aaagatgcgt gcctatttac ataaattttt taatccacac gacactaaaa atggtagttt 781 aaagattgga tatatgactg gtgccaaatt aaatcacgac cataaaactc aatttttcta 841 tgttgatcag agtttagtgt tttggtcctg tatgatggac caaatgtttc ttttatggtt 901 agagagcgac gcttctttac tcgataaaca ttctaggtac ttcattagtg acactggcca 961 aggtttaaat cgtgttcagc tttgtccatt agttcgatct acagttacca ggattctatc 1021 atccgttcag aagcaacaag aaatcccttg gatgggaagc tctgtaatac acttaggtga 1081 tagggatgtt cctaatgccc tgatgtttat tgacaaatat cgccaagtac ctcacatatt 1141 agcgccattg gtcaaagttt tacagcaact agaattttta cgtgatccat acttggttca 1201 gtatatcgaa aacgaatatg gaagcgtcaa tggacttcaa aaaacaattt tgttagactt 1261 ttttcgtcat ggttttaatg gtcagggatc tgatggtgga agttgtattg atggtcggct 1321 cactagtgca tggaattgga ccaacgaaat tactaagaag aagtattata ggattctttt 1381 aatgtccggc tttctcaact ttgaaggaat ctgacgttat tacatctttt tttgcaaatc 1441 ggcttttctc catcactcgt aattcatttt tccacaaaaa aaaaatacat atgaggataa 1501 atatcattct ttcagttacc cactaaacaa attattattc aaaggattct aacattttat 1561 taagtgatcc agtaaattat acacaaccaa atatccatta ttttaaccaa gtaaaaaaaa 1621 cccaaattta acaggtcatt tttaaattaa gagtcttcat tccagaattg ggaattagga 1681 agagattttt ttaaataaca taatccacta tataggaatc ctcaatgaga tcgttgactc 1741 ttgcaagatg acgatcagta tacggtatca tagaatctaa aatatcttt //