Dbfetch
LOCUS NM_001022492 1870 bp mRNA linear PLN 16-AUG-2024 DEFINITION Schizosaccharomyces pombe mediator complex subunit Med10 (med10), mRNA. ACCESSION NM_001022492 VERSION NM_001022492.3 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 1870) AUTHORS Schafer,B., Hansen,M. and Lang,B.F. TITLE Transcription and RNA-processing in fission yeast mitochondria JOURNAL RNA 11 (5), 785-795 (2005) PUBMED 15811919 REFERENCE 2 (bases 1 to 1870) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 3 AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 4 (bases 1 to 1870) AUTHORS Trinkl,H., Lang,B.F. and Wolf,K. TITLE Nucleotide sequence of the gene encoding the small ribosomal RNA in the mitochondrial genome of the fission yeast Schizosaccharomyces pombe JOURNAL Nucleic Acids Res 17 (16), 6730 (1989) PUBMED 2780299 REFERENCE 5 (bases 1 to 1870) AUTHORS Lang,B.F., Cedergren,R. and Gray,M.W. TITLE The mitochondrial genome of the fission yeast, Schizosaccharomyces pombe. Sequence of the large-subunit ribosomal RNA gene, comparison of potential secondary structure in fungal mitochondrial large-subunit rRNAs and evolutionary considerations JOURNAL Eur J Biochem 169 (3), 527-537 (1987) PUBMED 2446871 REFERENCE 6 (bases 1 to 1870) AUTHORS Lang,B.F., Ahne,F. and Bonen,L. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene JOURNAL J Mol Biol 184 (3), 353-366 (1985) PUBMED 4046021 REFERENCE 7 (bases 1 to 1870) AUTHORS Lang,B.F. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans JOURNAL EMBO J 3 (9), 2129-2136 (1984) PUBMED 6092057 REFERENCE 8 (bases 1 to 1870) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 9 AUTHORS Wood,V. and Rutherford,K. CONSRTM PomBase TITLE Direct Submission JOURNAL Submitted (13-MAR-2024) University of Cambridge, PomBase, Hopkins building, Tennis Court Rd, Cambridge, United Kingdom REFERENCE 10 AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003423). On Jun 21, 2024 this sequence version replaced NM_001022492.2. FEATURES Location/Qualifiers source 1..1870 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="II" gene 1..1870 /gene="med10" /locus_tag="SPOM_SPBC31F10.09C" /gene_synonym="nut2" /db_xref="GeneID:2540272" /db_xref="PomBase:SPBC31F10.09c" CDS 113..547 /gene="med10" /locus_tag="SPOM_SPBC31F10.09C" /gene_synonym="nut2" /codon_start=1 /product="mediator complex subunit Med10" /protein_id="NP_596571.2" /db_xref="GeneID:2540272" /db_xref="PomBase:SPBC31F10.09c" /translation="MLPQDDMTDEMKSLASRLEDTTQAFYDLALIVYNLEDTTPSDAI PESLDTLIRDLKSLPDISRKVNNLIPQDVLEYIEQGRNPDVYARQFSELVQKDNQYVN GKLYAIEGFQKAFAEEIKQAYPEVSSVVDKILNEGKVESTVS" ORIGIN 1 aagcataacc attatacagt tgagacagca ataaattgaa ggctgctgta ttcagtgcac 61 ttgtgctgca ttaaattgat ctttaaacct atttttatct ttggttttcg aaatgctgcc 121 ccaagatgac atgactgatg aaatgaaatc attggcaagc cgtttagaag acaccactca 181 ggctttttat gacttggcat tgatcgttta taaccttgaa gatactactc catctgatgc 241 cattcctgaa agccttgata ctcttatcag agatctcaaa tctcttcctg acatatctag 301 aaaggtgaat aacttaatcc ctcaagacgt cttggaatat attgaacaag gtcgaaatcc 361 agatgtatat gctagacaat tcagtgaatt ggttcaaaaa gataatcagt atgtcaacgg 421 gaagctatat gctatagagg gatttcaaaa ggcttttgcc gaagaaatta aacaggctta 481 tcctgaggta tcaagtgtgg ttgataaaat tttaaacgag ggaaaagtcg aatctacagt 541 ttcatgattg caccatagtc aaaattaatg atttcggatt tttttgaggt atgaaaaagc 601 gtacaactct taccgataat tcagctacct gcttacctac agtatctatc attgaattaa 661 aaaggggaaa ttctgaatta ttaactagta ctgtaaaact tcatctaaaa tttcaatgca 721 caactttcgt tcctcagctg acgcaggttc ataattcggc tgtataattt tatggagcaa 781 atgaaagttc gaaaatgagt tttgatagaa aatttttctt ttgttatttg cattgatatc 841 atgatttttc gtttgcatac gagatccaaa tatgtaacga tactccatca cttcttcatc 901 ttccttgacc caaaacttgt tagcttaaat tcctttacaa aaaattattt gcttacgtag 961 aaaacataaa ttctgtcttt gtttgctgat tttgatgtcc ctgatttcac ggctccattt 1021 attgatttat tatggtcgag attagtacct ccctcagttt ttttacacaa tttgatcggt 1081 tggtttttta caacgttcga atggttggac tgactttgtg attttagctc aaacttgggt 1141 aaataaggag atgcatgtga gttatcattg ccaataatat cgacattacc agaggatgtt 1201 tggctttcac tggaagatat ataattttgg cttaatggaa acgagtttat taaaccatca 1261 ctttttccta taacaagcac atcattgatg attttcggag agtttttatg gtgttcttgg 1321 ttaagaaggt aatctgatag cttctcactt ttgtatcttt tatcggcttt tgtattctta 1381 tctactaaag taacgtttcg agacttagct ttctttaatt gtttactttc agaaaatgtt 1441 tccttatttg aaataatgtc aaacgctgtc acagttcctt gatttgttat tttggaaaag 1501 tcgctttccc gataaatctc aaatgttggt tttctttttc cacacatggt tgtggatttg 1561 gtataatttt ccatttttaa ttaatttccg tgatcctctt ttcttttagt cttgaattac 1621 ccattcactt tggttgttgt cttagtagta tggtatggaa tgtaaacaaa caaactcacg 1681 aacgaatgcc ttttaagtgg ctacaaattt aggataccaa attctctatt taattggtta 1741 aaatgttatg tatttgtttt ttgtattatt tgacggttaa aattaagcat gtatgcatcc 1801 attttacata aataatgttg tgctgctttt ttgagatgga cggtatacta taatggcttt 1861 agatatctcg //