Dbfetch
LOCUS NM_001021177 2329 bp mRNA linear PLN 16-AUG-2024 DEFINITION Schizosaccharomyces pombe spermidine family transporter (SPOM_SPBC947.06C), mRNA. ACCESSION NM_001021177 VERSION NM_001021177.3 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 2329) AUTHORS Schafer,B., Hansen,M. and Lang,B.F. TITLE Transcription and RNA-processing in fission yeast mitochondria JOURNAL RNA 11 (5), 785-795 (2005) PUBMED 15811919 REFERENCE 2 (bases 1 to 2329) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 3 AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 4 (bases 1 to 2329) AUTHORS Trinkl,H., Lang,B.F. and Wolf,K. TITLE Nucleotide sequence of the gene encoding the small ribosomal RNA in the mitochondrial genome of the fission yeast Schizosaccharomyces pombe JOURNAL Nucleic Acids Res 17 (16), 6730 (1989) PUBMED 2780299 REFERENCE 5 (bases 1 to 2329) AUTHORS Lang,B.F., Cedergren,R. and Gray,M.W. TITLE The mitochondrial genome of the fission yeast, Schizosaccharomyces pombe. Sequence of the large-subunit ribosomal RNA gene, comparison of potential secondary structure in fungal mitochondrial large-subunit rRNAs and evolutionary considerations JOURNAL Eur J Biochem 169 (3), 527-537 (1987) PUBMED 2446871 REFERENCE 6 (bases 1 to 2329) AUTHORS Lang,B.F., Ahne,F. and Bonen,L. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene JOURNAL J Mol Biol 184 (3), 353-366 (1985) PUBMED 4046021 REFERENCE 7 (bases 1 to 2329) AUTHORS Lang,B.F. TITLE The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans JOURNAL EMBO J 3 (9), 2129-2136 (1984) PUBMED 6092057 REFERENCE 8 (bases 1 to 2329) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 9 AUTHORS Wood,V. and Rutherford,K. CONSRTM PomBase TITLE Direct Submission JOURNAL Submitted (13-MAR-2024) University of Cambridge, PomBase, Hopkins building, Tennis Court Rd, Cambridge, United Kingdom REFERENCE 10 AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003423). On Jun 21, 2024 this sequence version replaced NM_001021177.2. FEATURES Location/Qualifiers source 1..2329 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="II" gene 1..2329 /locus_tag="SPOM_SPBC947.06C" /db_xref="GeneID:2541275" /db_xref="PomBase:SPBC947.06c" CDS 199..1695 /locus_tag="SPOM_SPBC947.06C" /codon_start=1 /product="spermidine family transporter" /protein_id="NP_595270.1" /db_xref="GeneID:2541275" /db_xref="PomBase:SPBC947.06c" /translation="MKENDHLNSVSSSEIEKCDEDVEEELYSYPDSDFLVTFNGEDDP EKPLNWPVSIKLLNTALYGLTTFAAQFNSTTMSPTTSHLVNAYPIGHEVAVLPTCLYI LGIAFGPMIFAPFSEVNGRKIGVLVPFFLSILFTIGTASSDSVAAIMCTRFFAGLFAG APVVSSGGVMADLWCPAQRGTALIFYAFFVVSGADFGPIISSLVTEHSDTAWRWPLWT IVIIECFILTLDVFLIKETFGPVILATKAKNLRLTTKNWGLHAAHDEYRLDFKEFVTL HLVRPFAMLATPIVFFIAMFASYVYGILYLVLTTIPYTFGMTKNWQGTISTLPMIAMF TGVVIGGSFNIMWNQRYAKLITANGGKPLPEQRLPLMMAVGWLMPAGIFVFAWTNSPN IHWIAPFIGISMMGAGFFVIFQGCLNYLVDTFTKFAASAIAANTFTRSIFAGTFPLFS EIMFKKLGVHWGGSLVGFIALGMIPIPFIFYMMGDKLRRKNRFIKLIT" ORIGIN 1 agactagata gatggtatgg gcgatgctga ggctgtcaac aataatgaaa atttcggcct 61 cgtactgaat ttgctgttta caaataacta gactgggatg aaatagcagc tctgaaagca 121 ctaacaccga ggtttacgaa aaatataact aggaaaaagt gttagacatc gtctgtgatt 181 aatttccttc ttataacaat gaaagaaaat gatcatttga acagcgtctc atcctccgaa 241 atagagaagt gcgatgaaga cgttgaggag gaattatact cctatcctga cagcgatttt 301 cttgtaacat tcaatggcga agacgatcct gagaaaccgt tgaattggcc agtttcaatt 361 aaactattga atacagcact ttatggattg acaacatttg ctgcacagtt caatagtact 421 accatgtcac ctactacttc tcatctcgtc aatgcatatc caattggtca tgaggttgcc 481 gttttaccca cttgtttata cattttgggg atcgcatttg gtcctatgat ttttgcgccc 541 ttctctgaag tgaatgggag aaaaatcggc gtcttagttc cttttttcct gtccattctc 601 ttcacaatag gaactgccag ctctgacagc gtggcggcca tcatgtgtac acgatttttt 661 gctggcctgt ttgctggcgc ccctgtcgta tcttcaggag gtgtgatggc ggatctttgg 721 tgcccggcac agagaggtac tgcgttgatt ttctatgcgt ttttcgtcgt tagtggagct 781 gactttggtc ctattatcag tagcctggtt actgaacact cggatactgc gtggagatgg 841 ccgctatgga caattgtaat tattgagtgt tttatcctga cactcgacgt attcctcatt 901 aaagaaacct ttggcccagt catcttggct acgaaggcta aaaacttgag gctgactaca 961 aagaactggg gcttacatgc tgctcatgat gaatatagat tggattttaa ggaatttgtg 1021 acgctgcatc ttgtgcgacc ctttgcaatg ttggctactc caatcgtctt tttcatcgca 1081 atgtttgcca gttatgtcta cggtatcctt tatttagttt tgacgacaat tccttatacc 1141 tttggaatga cgaaaaattg gcaaggcaca atttctactc ttccaatgat tgccatgttt 1201 actggagtcg taatcggagg ttcgttcaac atcatgtgga atcagcggta cgcaaagtta 1261 atcactgcaa atggtggtaa accactaccg gagcaaaggc tcccactaat gatggcagta 1321 ggttggctga tgcctgctgg tatatttgta tttgcttgga cgaattcccc caatatacat 1381 tggattgctc cgtttattgg gatttcgatg atgggagctg gcttcttcgt gatatttcaa 1441 ggatgtttaa attacctggt tgatacattc accaagtttg cggcttctgc catcgctgca 1501 aacactttta caaggtcaat tttcgcaggt acttttccgt tgttttctga aattatgttc 1561 aaaaagcttg gcgttcattg gggaggaagt ttggtcggat ttatcgctct tggcatgatt 1621 cccattcctt tcatttttta catgatgggt gataagctgc gacgcaaaaa tcgcttcatc 1681 aagctaatca cttagccctg aagcgagtaa gcgattctat cactaattat tacattttat 1741 tatattatat cccttctgtg cgttttcaat ttttaatccc gtcgctgtct ttttttacct 1801 tttagatgga ttttttaact gcatgcggat gttttactct actttgaggc ttcgaaaaac 1861 attctttttt ttaaatctca aaaagtcggg tttttttact aaacctttta ctttttcctt 1921 tccttgtgga atagctgcaa cggatgcgca tggatggatg caatgcctat taatttataa 1981 ctgtttaatt tccgcccttt tctatattat atacatgcta gacactctgc gtgctatttg 2041 ttataccctg tggaaaatga aagaaagatc agagtgctgg ctatggcaaa acaccagtga 2101 aagtttcttt tagttcacac aaaagacaaa aataatattt ctttttcaac gcctatcttt 2161 ttcttttata tatttattcc ctattgtgca tctttcgcat tccatacatc taccttttct 2221 atttatcgat aatggattta agaatgcagg aattagccta atgtttgtgg atacttatat 2281 gatgcacaaa atcgaaataa atttatgtga tgtgatttac atccgtttg //